AMCG00011679


Basic Information

Item Value
gene id AMCG00011679
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 2198120 ~ 2199948 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011679
TTCACCGAGGACTTGCTGGTGTACTCCAACACCCTGTTCTACACTCCGGCCCCTTCCCCCGGCGGCATCATCCGGATGAACAACGCCTCCATCCCGCTTGAGTGCCACTATAACAGGATGGCCAATGTGAGCAGTGATGCCCTAAAGCCCACCTGGGTCCCCTTCACCTCCACTCGCTCTGCTGAGGATGTCCTGGACTTCTCCCTGCAGCTCATGACTGATGACTGGAGCTCCCAGAGGCCCTCCAACGTCTTCTACCTGGGGGACATGCTGCACCTTGAGGCCTCGGTCAACCTGACCGGCCACCTGCCCCTGCGGCTGTTCGTGGACCGCTGTGTGGCCACCCTGGAGCCGAACCAGACCTCCTCGCCCAGCTATGCCTTCATTGAGAACCATGGGTGCTTTGTGGACTCCAAGGCTACCGGCTCCAGCTCACGCTTCCTGCCGCGGCCCCAGGATTCTAGTCTCCGCATGCAGCTGGAGGCCTTCCGCTTCCACCAGGATGCCCGCAGCTCCCTCTACATCACCTGCCACCTGACCATGGCACTTGCCTCCCAGAACGATGCCCAGAACAAGGCCTGCTCCTTTGTGCAGAGATGGCAGTCTGTGGACGGCAGTGACCAGGTGTGCAGCTGCTGTGACTCCAGCTGTGACCCCGCCTCCAGGGCCCGGGGCTTGAGGCGCTGGAGCCGAGGGGCCCCATCTCCAGAGCAGGGGCTGGTCCAGGAGGCAGACGCCATGCTGGGCCCGTTCTTCATCATGGGCCGAGCTCCGCCCAACACTGCCCAGTAG

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011679 True 792 mRNA 0.63 7 2198120 2199948

Neighbor

gene id symbol gene type direction distance location
AMCG00011678 dvl2,LOC102202272 coding downstream 1893 2188253 ~ 2196227 (-)
AMCG00011672 acadvl,LOC107738021,LOC107595296,LOC107731915,LOC107597078 coding downstream 17832 2155079 ~ 2180288 (-)
AMCG00011673 NA coding downstream 81281 2097648 ~ 2116839 (-)
AMCG00011667 NA coding downstream 144569 2052011 ~ 2053551 (-)
AMCG00011666 LOC107750560,LOC106608953,LOC107561748,LOC104962535,LOC105895561,LOC105027200 coding downstream 166853 2022708 ~ 2031267 (-)
AMCG00011681 gbrap,gabarap,LOC106577557 coding upstream 7873 2207821 ~ 2213289 (-)
AMCG00011684 NA coding upstream 15586 2215534 ~ 2225496 (-)
AMCG00011680 NA coding upstream 26388 2226336 ~ 2231073 (-)
AMCG00011677 NA coding upstream 36969 2236917 ~ 2238518 (-)
AMCG00011682 NA coding upstream 68023 2267971 ~ 2268189 (-)
G131833 NA non-coding downstream 138513 2058779 ~ 2059607 (-)
G131756 NA non-coding downstream 195928 2000409 ~ 2002192 (-)
G131751 NA non-coding downstream 249181 1947447 ~ 1948939 (-)
G131741 NA non-coding downstream 282570 1900593 ~ 1915550 (-)
G131709 NA non-coding downstream 318829 1866793 ~ 1879291 (-)
G131871 NA non-coding upstream 34664 2234612 ~ 2236805 (-)
G131873 NA non-coding upstream 46823 2246771 ~ 2247129 (-)
G131884 NA non-coding upstream 78285 2278233 ~ 2278516 (-)
G131864 NA non-coding upstream 86921 2286869 ~ 2298484 (-)
G131889 LOC107384710,LOC100693841,LOC103365478,LOC106560692,LOC106602896,LOC107098142,LOC102777155,LOC105007919,LOC101477102 non-coding upstream 89562 2289510 ~ 2292486 (-)
AMCG00011648 LOC104949454,LOC101069368,LOC103480483 other downstream 333348 1849899 ~ 1864772 (-)
AMCG00011645 mpp1,vamp2,LOC106603197,LOC106523110,LOC107742350,LOC107720682,LOC107554313,LOC107082578,LOC107386619 other downstream 478894 1707717 ~ 1719226 (-)
AMCG00011640 NA other downstream 493121 1686309 ~ 1704999 (-)
AMCG00011603 NA other downstream 1191983 998991 ~ 1006137 (-)
AMCG00011601 NA other downstream 1387963 790008 ~ 810157 (-)
G131863 NA other upstream 93685 2293633 ~ 2296453 (-)
G132117 NA other upstream 261159 2461107 ~ 2461750 (-)
G132140 NA other upstream 366797 2566745 ~ 2577837 (-)
AMCG00011711 neurl4,LOC106577658 other upstream 409780 2609728 ~ 2617328 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other upstream 442715 2642663 ~ 2643456 (-)

Expression


Co-expression Network