AMCG00011682


Basic Information

Item Value
gene id AMCG00011682
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 2267971 ~ 2268189 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011682
ATGGACCTGGTGGAATGGCGAGGACAGAACCAGCAGACTCTCAGCGTGGGCTGGTTTCCTCCCGGCCTGGTGGCCTCTGTGGCCCCCGGAACCTCCTCAGGCTCAGCCCAGGGCTCAGCCATCATCAGCGCCCCCCTGAGGAACAGCCTGGTGCATGCGGGCCACGGGGACACACACCCCGAGCGCAGCTGGGGCACCCCCGACCGGCTGGaggagtga

Function

GO:

id name namespace
GO:0016301 kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011682 True 219 mRNA 0.68 1 2267971 2268189

Neighbor

gene id symbol gene type direction distance location
AMCG00011677 NA coding downstream 29453 2236917 ~ 2238518 (-)
AMCG00011680 NA coding downstream 36898 2226336 ~ 2231073 (-)
AMCG00011684 NA coding downstream 42475 2215534 ~ 2225496 (-)
AMCG00011681 gbrap,gabarap,LOC106577557 coding downstream 54682 2207821 ~ 2213289 (-)
AMCG00011679 NA coding downstream 68023 2198120 ~ 2199948 (-)
AMCG00011683 NA coding upstream 394 2268583 ~ 2272806 (-)
AMCG00011692 NA coding upstream 45440 2313629 ~ 2317588 (-)
AMCG00011690 NA coding upstream 68476 2336665 ~ 2337853 (-)
AMCG00011693 NA coding upstream 87490 2355679 ~ 2358344 (-)
AMCG00011691 NA coding upstream 94015 2362204 ~ 2365994 (-)
G131873 NA non-coding downstream 20842 2246771 ~ 2247129 (-)
G131871 NA non-coding downstream 31166 2234612 ~ 2236805 (-)
G131833 NA non-coding downstream 208364 2058779 ~ 2059607 (-)
G131756 NA non-coding downstream 265779 2000409 ~ 2002192 (-)
G131751 NA non-coding downstream 319032 1947447 ~ 1948939 (-)
G131884 NA non-coding upstream 10044 2278233 ~ 2278516 (-)
G131864 NA non-coding upstream 18680 2286869 ~ 2298484 (-)
G131889 LOC107384710,LOC100693841,LOC103365478,LOC106560692,LOC106602896,LOC107098142,LOC102777155,LOC105007919,LOC101477102 non-coding upstream 21321 2289510 ~ 2292486 (-)
G131905 NA non-coding upstream 49751 2317940 ~ 2319998 (-)
G131909 NA non-coding upstream 58938 2327127 ~ 2327708 (-)
AMCG00011648 LOC104949454,LOC101069368,LOC103480483 other downstream 403199 1849899 ~ 1864772 (-)
AMCG00011645 mpp1,vamp2,LOC106603197,LOC106523110,LOC107742350,LOC107720682,LOC107554313,LOC107082578,LOC107386619 other downstream 548745 1707717 ~ 1719226 (-)
AMCG00011640 NA other downstream 562972 1686309 ~ 1704999 (-)
AMCG00011603 NA other downstream 1261834 998991 ~ 1006137 (-)
AMCG00011601 NA other downstream 1457814 790008 ~ 810157 (-)
G131863 NA other upstream 25444 2293633 ~ 2296453 (-)
G132117 NA other upstream 192918 2461107 ~ 2461750 (-)
G132140 NA other upstream 298556 2566745 ~ 2577837 (-)
AMCG00011711 neurl4,LOC106577658 other upstream 341539 2609728 ~ 2617328 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other upstream 374474 2642663 ~ 2643456 (-)

Expression


Co-expression Network