AMCG00011692


Basic Information

Item Value
gene id AMCG00011692
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 2313629 ~ 2317588 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011692
CTGTCTGGCTCTGGTTGGAATATGTTTAGTTATGGCTGTTTAACACAAGAGCCAGCTGCTAAGTCCTCCGGGTGGAGATGTCATAGCTAACATCTGCGGGTCCAGAGCGTCCCCTGGTGCCGGGAAGGAtggtggtggaggtggagaACTTCTTCGGGGTGTACATGCTCTTCTGCACCAACCCCAAGTTCAAAGGGCGCATCTATATCGGCTTCACGGTGAACCCGGAGCGCCGGATCGGGCAGCACAACGGCGGGCGGCAGAAGGGTGGCGCCAAGAGGACGAGCGGCCGGGGGCCATGCAGTGCCGTCTCTTTGTCTTGCAGGGAGATGATTCTGATCGTCCACGGCTTCCCCTCGGATATCGCCGCCCTGCGGTTCGAGTGGGCCTGGCAGCACCCGCATTCCTCCCGGCGGCTGGGCCATGTGGGCCGCAAGTCCCGGCGTGAGTCCAGCCTGCAGTTCCACTGGCACGTGCTCTCGCACATGCTGCGGGTGGCGCCCTGGAGCCGGCTGCCCCTCACGGCCCGCTGGCTGCGGCAGGAGTACCGGCTGGACTTCCCACCCGAGCTGCAGCCCCCTCTGCACGTGCCCATCGCCTTCGGGCCGGTCCGCGCCAAGAAGACCGGCGGGGAGGCACCGGAGCGGGGCGGCAGCGGAGACACCGAGGCTGCCGGGCAGTGCCAGCTGTGCAGGACGGCCGTTGAGtcgTCCGCAGACTTGCTCTCCTGCTTCCATCCCTCTTGCCAGCTGTCAAGTCACCTGACCTGCCTGGCCAAGCACTTCCTGCAGTCTGAGCCTGCCCACCTACTTCCTGTGGAGGGGGTCTGTCCCGGCTGTTGCAACCCCGTCCTCTGGGGCGACCTGATCCGCTACAAGAAGGGGTGCTACGGCGACCTGGAGGAGTCAACGGCATTGGCCCAGCTGGACTGTATAGCCTTGAGCAACGGCCCGGTCtggtga

Function

GO: NA

KEGG:

id description
K15078 SLX1; structure-specific endonuclease subunit SLX1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011692 True 962 mRNA 0.65 7 2313629 2317588

Neighbor

gene id symbol gene type direction distance location
AMCG00011683 NA coding downstream 40823 2268583 ~ 2272806 (-)
AMCG00011682 NA coding downstream 45440 2267971 ~ 2268189 (-)
AMCG00011677 NA coding downstream 75111 2236917 ~ 2238518 (-)
AMCG00011680 NA coding downstream 82556 2226336 ~ 2231073 (-)
AMCG00011684 NA coding downstream 88133 2215534 ~ 2225496 (-)
AMCG00011690 NA coding upstream 19077 2336665 ~ 2337853 (-)
AMCG00011693 NA coding upstream 38091 2355679 ~ 2358344 (-)
AMCG00011691 NA coding upstream 44616 2362204 ~ 2365994 (-)
AMCG00011697 eif5a,LOC107691471 coding upstream 70024 2387612 ~ 2393372 (-)
AMCG00011698 NA coding upstream 86383 2403971 ~ 2416596 (-)
G131864 NA non-coding downstream 15145 2286869 ~ 2298484 (-)
G131889 LOC107384710,LOC100693841,LOC103365478,LOC106560692,LOC106602896,LOC107098142,LOC102777155,LOC105007919,LOC101477102 non-coding downstream 21143 2289510 ~ 2292486 (-)
G131884 NA non-coding downstream 35113 2278233 ~ 2278516 (-)
G131873 NA non-coding downstream 66500 2246771 ~ 2247129 (-)
G131871 NA non-coding downstream 76824 2234612 ~ 2236805 (-)
G131905 NA non-coding upstream 352 2317940 ~ 2319998 (-)
G131909 NA non-coding upstream 9539 2327127 ~ 2327708 (-)
G131913 NA non-coding upstream 11009 2328597 ~ 2328982 (-)
G132078 NA non-coding upstream 97895 2415483 ~ 2447423 (-)
G132116 NA non-coding upstream 142160 2459748 ~ 2459961 (-)
G131863 NA other downstream 17176 2293633 ~ 2296453 (-)
AMCG00011648 LOC104949454,LOC101069368,LOC103480483 other downstream 448857 1849899 ~ 1864772 (-)
AMCG00011645 mpp1,vamp2,LOC106603197,LOC106523110,LOC107742350,LOC107720682,LOC107554313,LOC107082578,LOC107386619 other downstream 594403 1707717 ~ 1719226 (-)
AMCG00011640 NA other downstream 608630 1686309 ~ 1704999 (-)
AMCG00011603 NA other downstream 1307492 998991 ~ 1006137 (-)
G132117 NA other upstream 143519 2461107 ~ 2461750 (-)
G132140 NA other upstream 249157 2566745 ~ 2577837 (-)
AMCG00011711 neurl4,LOC106577658 other upstream 292140 2609728 ~ 2617328 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other upstream 325075 2642663 ~ 2643456 (-)
AMCG00011741 LOC107676000,LOC107586166 other upstream 852120 3169708 ~ 3173836 (-)

Expression


Co-expression Network