AMCG00011699


Basic Information

Item Value
gene id AMCG00011699
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 2468228 ~ 2473307 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011699
ATGCCTCTGACCGGCAACTGTCCACTCTTCCAGTGCGACAGCAAGGACGGAGGGGATGCGGGGGAGGGGAGCAGCAAAGGGGCGGCCTGCTCCGGCCAGGACAGGGAGCCCCTGCAGAGCCCCCGCACTGCGCGCAGCCTGGAGGAGTGTCGGCGCCTCATCCTGGAATGGGCGGACGAGCTCAACAGCGTCGATAAGCTGTTCAAGACGAAGCCCTGGAGGGACGAGGTGGATGGAGAGGAGGGCAGCGAGACAGACGACCCCAGCGAGAAGGACAAGCAGAGGATCATGGAGTGGGCCCTGGAGCTGCAGAGCGTGTCAGAGaGCTGCGGTCTGCCGGGTGAAGAACTCTCCCAGATGCTGCGTCTCCTGGGCCTGAAGAAGCGCCGACTCATGAGCGTCCTGCCCTTCCTGGAGTTCATCACCTGGTCGCTGCTCAAGGAGGACGCCAAGGGACGTCAAAATACATCCCCAACTCAGGTGCAGGAGGGCCgggtggaggaggagctgcCCTACAGCCTACAGCGCTTCGACACCTGGCCCTGCGTCCTGGGATGGGAGGGCTTCTCGTCCGGCCGCCACTACTGGGAGGTGGAGCTGGCCAACAACGGCTACTGGCGGGTGGGCGTGACCTCGGCGCAGGCCAAGCGCAAGGGCCGCGTGCCCATGACCCCAAGGCACGGCTACTGGTCCCTGTGGCGCAGCACCCGG

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011699 True 711 mRNA 0.66 6 2468228 2473307

Neighbor

gene id symbol gene type direction distance location
AMCG00011698 NA coding downstream 51632 2403971 ~ 2416596 (-)
AMCG00011697 eif5a,LOC107691471 coding downstream 74856 2387612 ~ 2393372 (-)
AMCG00011691 NA coding downstream 102234 2362204 ~ 2365994 (-)
AMCG00011693 NA coding downstream 109884 2355679 ~ 2358344 (-)
AMCG00011690 NA coding downstream 130375 2336665 ~ 2337853 (-)
AMCG00011700 capgb,capg,LOC107665882,LOC107657288,LOC107556576,LOC107584402,LOC107733451 coding upstream 7784 2481091 ~ 2485730 (-)
AMCG00011703 polr2a coding upstream 22757 2496064 ~ 2510692 (-)
AMCG00011709 NA coding upstream 118552 2591859 ~ 2599202 (-)
AMCG00011710 NA coding upstream 166156 2639463 ~ 2641522 (-)
AMCG00011707 LOC105907188,LOC103386604,LOC106608754,LOC103358028 coding upstream 182922 2656229 ~ 2656728 (-)
G132116 NA non-coding downstream 8267 2459748 ~ 2459961 (-)
G132078 NA non-coding downstream 20805 2415483 ~ 2447423 (-)
G131913 NA non-coding downstream 139246 2328597 ~ 2328982 (-)
G131909 NA non-coding downstream 140520 2327127 ~ 2327708 (-)
G131905 NA non-coding downstream 148230 2317940 ~ 2319998 (-)
G132126 NA non-coding upstream 19036 2492343 ~ 2499180 (-)
G132129 NA non-coding upstream 38196 2511503 ~ 2515213 (-)
G132137 NA non-coding upstream 77149 2550456 ~ 2551120 (-)
G132138 NA non-coding upstream 79051 2552358 ~ 2553259 (-)
G132151 NA non-coding upstream 160989 2634296 ~ 2634952 (-)
G132117 NA other downstream 6478 2461107 ~ 2461750 (-)
G131863 NA other downstream 171775 2293633 ~ 2296453 (-)
AMCG00011648 LOC104949454,LOC101069368,LOC103480483 other downstream 603456 1849899 ~ 1864772 (-)
AMCG00011645 mpp1,vamp2,LOC106603197,LOC106523110,LOC107742350,LOC107720682,LOC107554313,LOC107082578,LOC107386619 other downstream 749002 1707717 ~ 1719226 (-)
AMCG00011640 NA other downstream 763229 1686309 ~ 1704999 (-)
G132140 NA other upstream 93438 2566745 ~ 2577837 (-)
AMCG00011711 neurl4,LOC106577658 other upstream 136421 2609728 ~ 2617328 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other upstream 169356 2642663 ~ 2643456 (-)
AMCG00011741 LOC107676000,LOC107586166 other upstream 696401 3169708 ~ 3173836 (-)
G132352 NA other upstream 728063 3201370 ~ 3207354 (-)

Expression


Co-expression Network