AMCG00011711 (neurl4,LOC106577658)


Basic Information

Item Value
gene id AMCG00011711
gene name neurl4,LOC106577658
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 2609728 ~ 2617328 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011711
ATGCAAAAGATCGGCGTGACGGCGCTGGACCCGGCGGGCCTGGATTTCCCCAGCAGCGCCACGGGGCTCAAGGGCGGCTCCTGGATCGTGTCGGGCTGCTCGGTGCTGCGGGACGGCCGCTCCATCCTGGAGGAGTACGGCCGCGACCTGGACCAGCTGGCCGAGGGCGACTGCGTGGGCATCCAGCGCAGCGCCCGGGGGGACCTGCACCTGTGGGTCAACGGCCAGGACTGCGGGCCCGCCGCCTCCGGCCTGCCCCCCCGCCTGTGGGCCGTGGTGGACCTGTATGGCAAGTGCACCCAGGTCACCGTGGTGAGCTGCGAGCCGCCCCCGGCCGAGGCGCCGCCGGGTCCCAGAGCGCCGGAGCTCAGGGTGATGGAGCGGGATGAGgacgaagaggaggaggaggaggaggcggaggggccggaggaggaggacgaggacgaaGAGGAAGAGGATGGGGGGACGACGTTGGCCACGGTGGCccgggagagagagaatcaccgggagagggagcgggagagggagagcgatgGGGCTGCCGGCGCCGTGGAGGAAGCGTTCCCCGAGCTCTCGTGCAGTCAGAGCCGGCCGGATAAGTTTCCCAGCACCCTAGAGACGGAGAGCGTGCGGCACGCTCATCAAGCTCAGCAACAACCACAAGACGGCCGAGCGGCGGCGGCCGCTGGACGAatcCGGATCGACAAGCTGGTGGACAAGTGGTCGGGCTCCATCGAGATCGGGGTGACCACCCACAACCCCAACAACCTGGACTACCCTGCCACCATGACCAATCTGCGCTCCGGCACCATTATGATGAGTGGGTGTGGGATCCTCACCAATGGCAAGGGGACCCGCCGGGAGTACTGTGAGTTCAGCCTGGACGAGCTGCAGGACAGGCCGGCTGCAGGAACGGGGTCTGTGCTCTCAGCTCAGGATGTAGCTCATTAA
>TU165699
CCCCTCACCCCCGGGGCCGGCGGCCTGGCGTCACTGGGGGCGGGGCCGGCCGGCATGATGACCAACGACGCACTGCTGTTCCATGAGAAGTGCGGCACGCTCATCAAGCTCAGCAACAACCACAAGACGGCCGAGCGGCGGCGGCCGCTGGACGAGTTCAACAACGGCGTGGTGATGACCAACCGGCCGCTGCGGCACAACGAGATGTTCGAGatcCGGATCGACAAGCTGGTGGACAAGTGGTCGGGCTCCATCGAGATCGGGGTGACCACCCACAACCCCAACAACCTGGACTACCCTGCCACCATGACCAATCTGCGCTCCGGCACCATTATGATGAGTGGGTGTGGGATCCTCACCAATGGCAAGGGGACCCGCCGGGAGTACTGTGAGTTCAGCCTGGACGAGCTGCAGGTGagccctctccctctcattcgTTCTCTCCCCCTTTATCTATC

Function

symbol description
neurl4 Predicted to enable ubiquitin protein ligase activity. Orthologous to human NEURL4 (neuralized E3 ubiquitin protein ligase 4).

NR:

description
neuralized-like protein 4 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011711 True 951 mRNA 0.68 7 2609728 2617328
TU165699 False 458 TUCP 0.63 3 2613479 2614515

Neighbor

gene id symbol gene type direction distance location
AMCG00011709 NA coding downstream 10526 2591859 ~ 2599202 (-)
AMCG00011703 polr2a coding downstream 99036 2496064 ~ 2510692 (-)
AMCG00011700 capgb,capg,LOC107665882,LOC107657288,LOC107556576,LOC107584402,LOC107733451 coding downstream 123998 2481091 ~ 2485730 (-)
AMCG00011699 NA coding downstream 136421 2468228 ~ 2473307 (-)
AMCG00011698 NA coding downstream 193132 2403971 ~ 2416596 (-)
AMCG00011710 NA coding upstream 22135 2639463 ~ 2641522 (-)
AMCG00011707 LOC105907188,LOC103386604,LOC106608754,LOC103358028 coding upstream 38901 2656229 ~ 2656728 (-)
AMCG00011716 NA coding upstream 131866 2749194 ~ 2776484 (-)
AMCG00011715 NA coding upstream 167432 2784760 ~ 2785717 (-)
AMCG00011721 NA coding upstream 203015 2820343 ~ 2846905 (-)
G132138 NA non-coding downstream 56469 2552358 ~ 2553259 (-)
G132137 NA non-coding downstream 58608 2550456 ~ 2551120 (-)
G132129 NA non-coding downstream 94515 2511503 ~ 2515213 (-)
G132126 NA non-coding downstream 110548 2492343 ~ 2499180 (-)
G132116 NA non-coding downstream 149767 2459748 ~ 2459961 (-)
G132151 NA non-coding upstream 16968 2634296 ~ 2634952 (-)
G132155 NA non-coding upstream 28245 2645573 ~ 2647388 (-)
G132166 NA non-coding upstream 108339 2725667 ~ 2726283 (-)
G132233 NA non-coding upstream 383709 3001037 ~ 3042256 (-)
G132261 NA non-coding upstream 461203 3078531 ~ 3089532 (-)
G132140 NA other downstream 31891 2566745 ~ 2577837 (-)
G132117 NA other downstream 147978 2461107 ~ 2461750 (-)
G131863 NA other downstream 313275 2293633 ~ 2296453 (-)
AMCG00011648 LOC104949454,LOC101069368,LOC103480483 other downstream 744956 1849899 ~ 1864772 (-)
AMCG00011645 mpp1,vamp2,LOC106603197,LOC106523110,LOC107742350,LOC107720682,LOC107554313,LOC107082578,LOC107386619 other downstream 890502 1707717 ~ 1719226 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other upstream 25335 2642663 ~ 2643456 (-)
AMCG00011741 LOC107676000,LOC107586166 other upstream 552380 3169708 ~ 3173836 (-)
G132352 NA other upstream 584042 3201370 ~ 3207354 (-)
AMCG00011745 NA other upstream 618811 3236139 ~ 3240000 (-)
AMCG00011765 NA other upstream 1252504 3869832 ~ 3879185 (-)

Expression


Co-expression Network