AMCG00011720


Basic Information

Item Value
gene id AMCG00011720
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 2858086 ~ 2863415 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011720
CTGTGATCTGTTTCTTCTGCCCAGCACATGCCTCTGTCTGTCCttccttctttccttttttcaaatCACACGTCGGGGGTTTTGGCAGCAGGCGAGGGGACGGGCGCCTGTCAAACCCCGGCCAATCAGCCGCCACCACGCCGGTTTGAGTCCGGCGTGTCGGACTAGGAGAGGAGAGGACGGGGGAGGAATAACACAGCGGCACCGGCCACAGGGTAGTGTCGGGATTAGGGTGACAGCCTCCCATCGGAGCTCAGAAACtggattataaataaaataagtgagaGTGAGTGGCGAAAACAGCAATAAAGACATTTCCCGCACAAGGAGAGGACCACCCGTCCATGCGTTACTCCTAGCCGAGGTGGGAACCTTTCATCTGCAGTTTGCGGGAGCCGGGCGGCGGAGGAAGACGGACGGACCGCGCCGAGGCACAGCCGAGCTAGAGGCACTTTTTTTTGGACGGGAAGTCGGGTTTCCGCGTCCGCTGGATAGACGAgcactttctgtttgtttgttggagGGGGAGACATTTTCGCCGGCGCTGCGGTAAACGGGAGGGGGGGGGACTGAGTAGCCGGACCGGACACCGAGACCGGGAGACAGACAGGCCGATCTGCCGACGATGGAGCCGGGCCGGCGGAAGGGACTGAGCGGCGTGCTGTCGTCCCTGTCGCTGCTGTGCGTGGTGCTGGACCTGCAGCTGGACGcGGTCCTGGGGGCGAGCCACGTGGAGATCGAGCAGCACCTGGAGATGGGCCGCAAGCTGCTGGCGGCCGGGCAGCTGGCCGAGGCGCTGTCCCACTACCACTCGGCCGTGGAGGGCGACTCCAAGAACTACCTGACCTACTACAAGCGGGCGGCTGTGTTCCTGGCCATGGGCAAGTCCAAGTCCGCCCTGCCGGACCTGTCCAAGGCCATCGAGCTGAAACCCGACTTCCTGGCTGCCCGGCTGCAGAGGGGGAACATCCTGCTGAAACAGGGCAACACCCAGGAGGCCCGGCAGGATTTCGAGGCCGTGCTCCACGGAAACCCCAGCAACGAGGAGGCGCAGGAGCAGCTGGCGCGGGCGGAGGAGCTGGAGGGGCAGGCGGAGGAGGCGCGCCAGGCCCATCGGCGTGGGGACTGCCAGGGCACCGTCAGTGCCATGGAGAAAGTCATTGAGctgtCCCCGTGGGACCCGGACGCGCGGGAGCTGAGGGCCGAGTGCTTCATCCAGCTGGGGCAGCTGCAGAAGGCCATCCAGGACCTGACGCCCACCACCCGCCTGCGCAACGACAACCGCGCCGCCTACCTGCAGCTCAGCCAGCTGCACTACAGACTGGGCGAGCACGAGCAGTCTCTCAGTCAGGTGCGCGAGTGTCTGCGTCTGGACCAGGACGACAAGGAGTGTTTCTTGCACTACAAGCAGGTGAAGAAACTGTCCAAGCAGCTGGGGTCCGCCGAGGAGCTGATCTCTGAGAACAGATACCAGGAAGCGATCGACAAGTATGAGGCTGTGATGAAGACTGAGCCCACGGTGCCCTACTACACCACCAGAGCCAAGGAGCGCATCTGCCACTGCCTGGCCCTGAGTCAGCAGGCGCGGGAGGCGATCGACGTGTGTTCGGAGGCGCACCAGCGAGACCCACGGAACGTCTTCGTCCTGAGAGACCGGGCCGAGGCCTTCATCCTCAACGAGGAGTACGAGAAAGGTGTGGAGGATTACCAGGAGGCGCGGGAGCTGGATGCAGACAGCCAGGAGCTGCGCGAGGGGCTGGACCGCGCCCAGAAGCTGCTCAAACAGTCGCGCAAGAGGGACTATTACAAGATCCTCGGGgaaataatcAAGGCCTACAGGAAGCTGGCGCACCAGTGGCACCCGGACAACTTCCAGAATGAGGCAGACAAGAAGGAGGCGGAGAAGAGGTTCATCGACATCGCCTCGGCCAAAGAGGTCCTCACTGACCCGGAGATGCGACAGAAGTTCGACGCCGGGGAGGACCCCCTGGACCCCGAGAGCCagcagggaggaggggggggccAGGGCCACGGCGGCTGGCCCTTTGAGTTCAACCCATTCGGCTCCGGAAACTTCCACTTCAAATTCCAATACAACTAGACTGGACGCACTGTcggggttggggggtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011720 True 2130 mRNA 0.63 12 2858086 2863415

Neighbor

gene id symbol gene type direction distance location
AMCG00011719 NA coding downstream 5563 2848567 ~ 2852523 (-)
AMCG00011721 NA coding downstream 11181 2820343 ~ 2846905 (-)
AMCG00011715 NA coding downstream 72369 2784760 ~ 2785717 (-)
AMCG00011716 NA coding downstream 81602 2749194 ~ 2776484 (-)
AMCG00011707 LOC105907188,LOC103386604,LOC106608754,LOC103358028 coding downstream 201358 2656229 ~ 2656728 (-)
AMCG00011722 NA coding upstream 1258 2864673 ~ 2870960 (-)
AMCG00011728 fis1,LOC106577644 coding upstream 13861 2877276 ~ 2885423 (-)
AMCG00011732 NA coding upstream 22236 2885651 ~ 2890286 (-)
AMCG00011725 NA coding upstream 33275 2896690 ~ 2899849 (-)
AMCG00011731 NA coding upstream 37234 2900649 ~ 2909919 (-)
G132166 NA non-coding downstream 131803 2725667 ~ 2726283 (-)
G132155 NA non-coding downstream 210698 2645573 ~ 2647388 (-)
G132151 NA non-coding downstream 223134 2634296 ~ 2634952 (-)
G132138 NA non-coding downstream 304827 2552358 ~ 2553259 (-)
G132137 NA non-coding downstream 306966 2550456 ~ 2551120 (-)
G132233 NA non-coding upstream 137622 3001037 ~ 3042256 (-)
G132261 NA non-coding upstream 215116 3078531 ~ 3089532 (-)
G132362 NA non-coding upstream 420406 3283821 ~ 3289291 (-)
G132392 NA non-coding upstream 556861 3420276 ~ 3432121 (-)
G132395 NA non-coding upstream 577980 3441395 ~ 3457472 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other downstream 214630 2642663 ~ 2643456 (-)
AMCG00011711 neurl4,LOC106577658 other downstream 240758 2609728 ~ 2617328 (-)
G132140 NA other downstream 280249 2566745 ~ 2577837 (-)
G132117 NA other downstream 396336 2461107 ~ 2461750 (-)
G131863 NA other downstream 561633 2293633 ~ 2296453 (-)
AMCG00011741 LOC107676000,LOC107586166 other upstream 306293 3169708 ~ 3173836 (-)
G132352 NA other upstream 337955 3201370 ~ 3207354 (-)
AMCG00011745 NA other upstream 372724 3236139 ~ 3240000 (-)
AMCG00011765 NA other upstream 1006417 3869832 ~ 3879185 (-)
AMCG00011775 NA other upstream 1074069 3937484 ~ 3944519 (-)

Expression


Co-expression Network