AMCG00011721


Basic Information

Item Value
gene id AMCG00011721
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 2820343 ~ 2846905 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011721
aaaaaaaaaaaaaaggatggcCTCTCCGGGTCGCAGCGGCGGAGAGGAGGACGACGGCCCGGCGCTGTACTCCGACGGAGGCGGCTTTGAAGAAGACGAGGGAGACGACGAAGAGGACGCGGCGGCGGCGGACGGGGACGCAAGCGACATCTGCTCGCCGGCGGCGCCTGGGGAAACtgcagcggcggcggcggcagAGGAGCACGAGGGAGCGGGGGAGCCGTCGGATGTGGAAGTAGgggtgaagaagaagaagagagggcccaagaagaagaaggagcCCAAGGAGTCCAAGACAGCCAAGCCCCGGAAACGCAAGAAGCCCgacagTGGGGCAGAGGGGGAGTCGGACAGGGAGTATGCGGAGAACTCGGACAGCGGGGCCAGCGAGTACACCGCCAGTGgcaagaagaagagaaagaagcacaaggagaagaaggagaagaaaaccAAGCGGAAGAAGAAAGAGAACGAGGACAGCAACCATGAGGAGGCCGCAAAGcccgTGGAGCAGAAGTCCTCAGGCCAGCTCCTGCGAGGCTGGGGTCTGGAGGATGTGGAGCATGTCTTCACCGACGAGGATTACCGGACCCTCACCAACTACAAGGCCTTCAGCCAGTTCATGCGGCCCATGATTGCCAAAAAGAACCCCAAGATTCCCATGTCCAAGATGATGACCATCCTGGGGGCCAAGTGGCGCGAGTTCAGCTCCAACAACCCCTTCAAGGGCTCTGCCGCCGCCGTGGCTGCTGCCGCCGCTGCAGCCGCCGCTGCAGTGGCTGAGCAGGTCTCTGCGGCCTCGGCGTCCCCCGAGCATCCGCCTCCGCCTCCCCCCGTGCGCAAGGCCAAGACCAAGGAGGGAAAAGGCCCAGGCTATAAGAAACGCAGTAAGAGCCCCCGCATCCCTGAGAAGAAAAAGGCCAAGGCCAAGAAGATGGCCCCCCTGCGCATCAAGTTGGGCACCCTGGGTGGCAAGAGGAAAAAGAGCAGCTCTAGCGACGAGGCTGAGCCGGACTCGGAGACCTCCAGCGTCCACAGCTCGTCTGTGCGCTCCGACACCTCGGGCCGGGCCAAGAAGGCCAAGCGTGGCCGgcccaagaagaagaagaagattgtGGTGGGCGAGGAGGACGCTGAGGGCTACGAGACCGACCACCAGGATTACTGCGAGGTCTGCCAGCAGGGCGGCGAGATCATCCTGTGCGACACCTGCCCCCGGGCCTACCACTTGGTGTGCCTGGAGCCCGAGCTGGAGAGGGCCCCCGAGGGCAAGTGGAGCTGCCCCCACTGCgagAAAGAGGGGATCCAGTGGGAGGCGAAGGAGGACGAGTTCGAGGAGTtcgaggaggaggtggaggagtgCGGGgtgggcggcggcggcggcggggcCGGtggggaggcggaggaggaCGACGACCACATGGAGTTCTGCCGGGTTTGCAAAGATGGCGGAGAGCTCCTCTGCTGCGACTCCTGCCCGTCCTCCTACCACATCCACTGCCTGAACCCGCCCCTGCCCGAGATCCCCAACGGCGAGTGGCTGTGCCCGCGCTGCATGTGCCCCCCAATCAAGGGCCGCGTCCAGAAGATCCTGCACTGGCGCTGGGGAGAGCCGCCGCCCCCCGTGCCCGTGCCCCCGCCACCGGACGCCGACCCCCGGGACCCGCCCCCGCCGCCCGCCCTGGGCCGCCCCGAGCGCGAGTTCTTCGTGAAGCTGGCGGGGCAGTCGTACTGGCACTGTACCTGGGTGACTGAGCTGCAGGTGGGATTGAGGGCTGGGTTGGAGATCTACCATTCGGTGATGTTCCGGAACTACCAGCGGAAGACTGACATGGACGAGCCCCCGGGACTGGAGTACGGCTCAGGGGGGGAGGACGAGGGCAAGAGTGCCGGCCGCCGCCCCAAGGACCCCCAGCTGGCCGTGCTGGAGGAGGGGTACCTGCGCTACGGCATCAAGCCTGAGTGGATGATGATCCACCGCATCATCAACCATAGTGTGGATAAGAAGGGGAATTACCTGTACCTGGTGAAGTGGAGGGACCTGACCTATGACCAGTGCACCTGGGAGATGGATGACCTGGACATCCCAGACTTCCGCGCCCACAAGGCCAACTACTGGAGCCACAGggagCAGGTGCTGAAGGACGACCCCGAGCGGCCAAGGAAGCTGAAGGGCGGGAAGAAGGACGAGTGCGACTACCCCCCCAGCTCCCCCGTGACCGACCCTACGGTGAAGTACGAGCTGCAGCCGGACTTCGTGACGGTGACGGGTGGCACACTGCACTTGTACCAGCTGGAGGGGCTGAACTGGCTGCGCTTCTCCTGGGCGCAGGGCACTGACACCATCCTGGCCGACGAGATGGGCCTGGGCAAGACCATCCAGACCATCGTCTTCCTCTACTCGCTCTTCAAGGAGGGTCACACCAAGGGCCCGTTCCTGGTGAGTGCCCCGCTGTCCACCATCATCAACTGGGAGCGCGAGTTCGAGATGTGGGCGCCGGACTTCTACGTGGTGACCTACACCGGTGACAAGGACAGCCGCGCCGTCATCCGCGAGAACGAGTTCTCCTTCGACGACAGCGCCATCAAGGGTGGCAAGAAGGCCTTCAAGCTGAAGAGGGAGGCGCCCATCAAGTTCCACGTGCTGCTGACGTCCTATGAGCTGGTGACCATCGACCAGACGGCGCTGCGCTCCATCGACTGGGCCTGCCTGGTGGTGGATGAGGCCCACCGCCTCAAGAACAACCAGTCCAAGtttttcAGGAGACTGAATGACTACAAGATCGACCACAAGCTGCTGCTGACCGGCACCCCCCTGCAGAACAACCTGGAGGAGCTCTTCCATCTGCTCAACTTCCTCACCCCCGACCGCTTCAATAACCTGGAGGGCTTCCTGGAGGAGTTTGCGGACATCTCGAAGGAGGACCAGATCAAGAAGCTGCACGACCTGCTGGGGCCCCACATGCTGCGCCGACTGAAGGCCGACGTGAAATACTACAAGTACATCCTGACGCGCAACTTCGAGGCGCTCAACTCCAAGGGGGGGGGCAACCAGGTGTCTCTGCTCAACATCATGATGGACCTGAAGAAGTGCTGCAACCACCCCTACCTCTTCCCCGTGGCGTCACTGgagTCCCCGAAGACGGCGAGTGGGGCCTATGAGGGCACAGCGCTGACCAAGGCCTCAGGGAAGGTGCTGCTGCTTCAGAAGATGCTGAAGAAGCTGAAGGAGCAGGGCCACCGTGTGCTCATCTTCTCCCAGATGACCAAGATGCTGGACCTGCTGGAGGACTTCCTGGACTTCGAGGGCTACAAGTACGAGCACACCGTCATCATCTTCGACTCCGACTGGAACCCGCACAACGACATCCAGGAGCGCATCACCCAGGTGGCCAAGCGCAAAATGATGCTCACCCACCTGGTGGTGCGGCCCGGCCTGGGCTCCAAGGCCGGCTCCATGtccaagcaggagctggacgaCATCCTGAAGTTCGGCACCGAGGAGCTGTTCAAGGATGAGATCGAgggtgaggagggggagggaggcggagagagggggggagtggagggagaggagaggaggggacaGGGGAGGAAAGGGTGCGGGAtcaagaagaaggagagagggagagagagagCCGGCGACAACAAGGACGAAGACGGCAGCGTCATCCACTACGACAGCGCGGCCATCGAGCGCCTGCTGGACCGCAGCCAGGACGACACGGATGACACGGACATGCAGAACATGAACGAGTACCTGAGCTCCTTCAAGGTGGCGCAGTACGTGGTGCGCGAGGAGGACAAGAAGCTGCTCCGGCACCACTacgagcagcagcaggaggaccTGGCCCGCAACCTGGGCAAGGGCAAGAGGATCCGCAAGCAGGTCAACTACAACGACGCCGCCCAGGAGGACCAAGATTGGCATGATGGTATTTCAGATAACCAATCGGAGTACTCCGTGGGCTccgaggaggaggacgaggactTCGATGAGAGGCCCGAGGGTCGCCGCCAGTCGCGCCGGCAGCTCCGCAATGAAAAGGACAAGCCGCTCCCACCCCTGCTGGCCAGAGTGGGGGGCAACATCGAGGCAACTCTGAGGGCAGCTAAGTACGCGAGCGGGGGCCTCGGGAATGTGGTGTCCCCCCCTGCCACCCTGCCCCTCAGTACAGTCCccttcctcccctcctcccttcaTCCCCAGACCGTGCTTGGCTTCAACACCCGCCAGCGCAAGGCCTTCCTGAACGCGGTGATGCGCTGGGGCATGCCCGCCCAGGACGCCTTCTCCTGCCAGTGGCTGGTCAGGGACCTGCGGGGCAAGAGCGAGAAGGAGTTCAAggCCTATGTGTCCCTGTTCATGCGGCACCTGTGCGAGCCGGTGGCCGACGGCTCGGAGACATTTGCCGATGGGGTGCCGCGGGAGGGGCTGTGCCGCCAGCCGGTGCTGACGCGCATCGGGGTCATCCTGCCGGAGCTGCGGCCCTCCCTGGTGGGGTGCGAGTCGTcctccccgcccccccccaccaagaTGACCACGCCCTCGGCCACCCCCACGGCCACGCCCGACCCCAGCTGCACCAACACACCCTGCACCTCCAAACCGGCTACCCCGGCGCCGGCGGAGAAGAGCGAAAAGAATGGCAAGGAGGGAGACAAGGAGGAGGCCGAGAGCCAGCCGGAgcgagagaaggagaaggacggggagaaagagagggaggaccCGTGCCGAGACAGTACGGACACCGTGCCTCCGATAGCGGCGGAGGACGGCTCCCAGGCTCCACCCCCCGGCGAGAAACATGATACCGAGGACCGGGGGTCCGAAGAGGAGGCACGCAGAGACACGCCTCCTGACCCATCGGAGGCCCCGCCCCCCACAAAGGACAAGAAGCTGGAGGAGGGCGGAGAGCCGGAGAGCTCGGCAGACGTTGCCCCGCCCACTCCCGGCACAGCGCCACCCTCTGTCAAGGAGGAGAGACCAGGTACGGCAACGCGACCAAAGAGCGAAAGCCCTCACTGTGTGGTAGAGGGAGGGGGGCGCAGAAAGAATGAGGAGAGGGCGGCCGTGTCCTCGGGGAAGATGAACGAGATCTGGCACCGGCGCCACGACTACTGGCTGCTGGCCGGCATCGTGCTGTATATCAGTGTTAACCCCTCTCCCGCCCGTCCCTCTCAGTTGCTGGAGCAGGCTCTGGTGATCGAGGAGCAGCTGCGCCGGGCCGCGTACCTGAACATGACACAGGACCCCTCCCACCCCGCCATGGCCCTGAACGTGCGCTTCGCCGAGGCGGACGTGACCCGGCTGCCCGCCACCCTGTCCCGCATCCCCCCCATCGCCGCCCGCCTGCAGATGTCCGAGAGGAGCATCCTGAGCCGGCTGGCCAGCAAGGGCACCGAGACCCACGTCCCCCCGCCCATCCCTCCAGGCCCCTACGCCACTCCGCCAAATTTCGGGGCCCCCTTCACCCCCGCCCCCTCGGCCGCAGTGCCCTTGGGGGGCGCCAACTACGCCCAGATGCCCCCCGGGTCGTTCATATCAGAAGCCAGCGCCTGCCTGAAGACCAAGGAATATGATATCCTGCAGCGCCAACGCGTGGTGGATCTGTGGAAGGACGGCAAGTCGGAAGGGTCAATCGGGCAGGAGCTGCGGATGCCCAAGTCCACCGTTCACAGCATCATTGTCAAGTACCGGCTGAGCAACACGGTCGAGAACTTACCGCGCAACGGCCGGCCCAAGAAACCGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011721 True 5755 mRNA 0.64 38 2820343 2846905

Neighbor

gene id symbol gene type direction distance location
AMCG00011715 NA coding downstream 34626 2784760 ~ 2785717 (-)
AMCG00011716 NA coding downstream 43859 2749194 ~ 2776484 (-)
AMCG00011707 LOC105907188,LOC103386604,LOC106608754,LOC103358028 coding downstream 163615 2656229 ~ 2656728 (-)
AMCG00011710 NA coding downstream 178821 2639463 ~ 2641522 (-)
AMCG00011709 NA coding downstream 221141 2591859 ~ 2599202 (-)
AMCG00011719 NA coding upstream 1662 2848567 ~ 2852523 (-)
AMCG00011720 NA coding upstream 11181 2858086 ~ 2863415 (-)
AMCG00011722 NA coding upstream 17768 2864673 ~ 2870960 (-)
AMCG00011728 fis1,LOC106577644 coding upstream 30371 2877276 ~ 2885423 (-)
AMCG00011732 NA coding upstream 38746 2885651 ~ 2890286 (-)
G132166 NA non-coding downstream 94060 2725667 ~ 2726283 (-)
G132155 NA non-coding downstream 172955 2645573 ~ 2647388 (-)
G132151 NA non-coding downstream 185391 2634296 ~ 2634952 (-)
G132138 NA non-coding downstream 267084 2552358 ~ 2553259 (-)
G132137 NA non-coding downstream 269223 2550456 ~ 2551120 (-)
G132233 NA non-coding upstream 154132 3001037 ~ 3042256 (-)
G132261 NA non-coding upstream 231626 3078531 ~ 3089532 (-)
G132362 NA non-coding upstream 436916 3283821 ~ 3289291 (-)
G132392 NA non-coding upstream 573371 3420276 ~ 3432121 (-)
G132395 NA non-coding upstream 594490 3441395 ~ 3457472 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other downstream 176887 2642663 ~ 2643456 (-)
AMCG00011711 neurl4,LOC106577658 other downstream 203015 2609728 ~ 2617328 (-)
G132140 NA other downstream 242506 2566745 ~ 2577837 (-)
G132117 NA other downstream 358593 2461107 ~ 2461750 (-)
G131863 NA other downstream 523890 2293633 ~ 2296453 (-)
AMCG00011741 LOC107676000,LOC107586166 other upstream 322803 3169708 ~ 3173836 (-)
G132352 NA other upstream 354465 3201370 ~ 3207354 (-)
AMCG00011745 NA other upstream 389234 3236139 ~ 3240000 (-)
AMCG00011765 NA other upstream 1022927 3869832 ~ 3879185 (-)
AMCG00011775 NA other upstream 1090579 3937484 ~ 3944519 (-)

Expression


Co-expression Network