AMCG00011726


Basic Information

Item Value
gene id AMCG00011726
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 2938292 ~ 2945893 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011726
GCCACACGCTCAGACCTGTGATCACGTCTTTGCAGCTAGCGCAGACTTTCCACAGCTGTGCGCAGACCTGCAcaatcccagcgatcccattggtgcagccgcgcagacctgcggaccTGTGCGCTCATCCGGCAGCAGGAAGAAGGAAGTGCGCCGCTGCCCCGCAAAGCAGATTCATTGCGCTTCTCATTGCCCTGCAGTCAGCTGGCCTCCGTGCAAACACCGCCTGACCTCAGGTTTCAGAGTGCCCGTGACCATGGACGAACGCAGAGACCTCCTTCAAAACATCCCCAAGCCACCCACGCTCAACACCCCCAGCCTAGgcGTGCTGTACCTGCACGACTGCCCCCGCCAGCGCTACATCCCCATCTACCTGGTGGTCTCGGGGGTCTTCACGGTGGCCCTCAGCCTGCTGGCCTGCCTGCCCTGCACTAAGAACGAGGAAGAGGGCGGCACCGGGGGGCTGCTGGGCAACGTCTGCACCACCTGGACATCGCTGGCgtccctcttcctcttctgctGGTTCATCACAGGGAACGTGTGGATTTACTCCATCTACCAGCCCAACTACACCCCCGGAGCCGCCGACTTCTGCAACAAGACGCTGTACCTGTTCGCCTTCTGGACGACCACCCTGGTGTACATCCTGCTGGGGGTGCTGCTCGTGGGGGGGTGCTGTGCCTTGCTGTGCGTGTGCATCTGCGGGGGCAACAACAGTGGGATCCTCAGAGAGGATGTTTAAAAttcccacccacccacccatcATCCACTCGGTGCGAATTCTTATGCCCAACAtgttcagtttctctctctttagcTCTGTCTCTTCCTCACCTGTCGTTCTggtctgtattttaattgcactaAAGTAATTGTTCATTAAATCGACCCTcccacacacagacgcacacacaagTAAATTGCAGcactgtctttttcttttgtttttaacaaatttCACTTGCATAACGATGAAAAAACTTGTCTTTCAAATATCCCAACATGGCCGTTTGCTTCCACAATCTGctctgatctgtgtgtgtgtgtaagtggtTTGTGGAGTTTGCTGCAGTCCCCTGGGTTGGCTGTGTgttgctctctctttctctctctttccgaACATGAAATGCACATGCACTTGCTACACTAAACAAAGAAACCCCTTGAAAGGTACCCcagtattgaaaatgtttacggcttttaaaagagagagggatggagagagagacagatgtgtACAAATACACCCGTGCCCTCCACTCAAGAAAATCTTCTCCATATCAACTGATGTCCGACTGTCCTCCAGCTGACTGTGACAGCGTGTGATTTTACGGTTTAATTGAACACGACTGTGCCTTCATAATGGGCCtctaattaaacttaatttcctgtgaattcattacttttttatttatttgtatatgtgtgccAATTGGATTTTCTGTTGTTTACACCATTGTGTTTCACAGATGAGTGGATATTAATGTACCCTCTGTTAGAAAAGCATTAAAAAGCCAATCAGAGCTTAAACACACTTGGAATCAGTGTGTATGACCTGTgcctttaaatattgttttgcctATAGGAGACCACTAGGTGGCGTCTGTACCCAGTCTGCTGAGACTGTGGTGTATTAAATTGTTTGCCAATAAAAGTGTCAGGAATGTCTCGAGTGTCTTGCCGTCTGTTAAGAGTGGTCCCGGTGTGGGGGGAAGTTAGTTGGCCAGAGATTGAACGTGCAGG

Function

GO: NA

KEGG:

id description
ko04612 Antigen processing and presentation

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011726 True 1743 mRNA 0.50 4 2938292 2945893

Neighbor

gene id symbol gene type direction distance location
AMCG00011729 NA coding downstream 16061 2919841 ~ 2922231 (-)
AMCG00011731 NA coding downstream 28373 2900649 ~ 2909919 (-)
AMCG00011725 NA coding downstream 38443 2896690 ~ 2899849 (-)
AMCG00011732 NA coding downstream 48006 2885651 ~ 2890286 (-)
AMCG00011728 fis1,LOC106577644 coding downstream 52869 2877276 ~ 2885423 (-)
AMCG00011727 NA coding upstream 8544 2954437 ~ 2962627 (-)
AMCG00011730 NA coding upstream 29658 2975551 ~ 2984794 (-)
AMCG00011734 NA coding upstream 110023 3055916 ~ 3065952 (-)
AMCG00011742 NA coding upstream 191092 3136985 ~ 3138296 (-)
AMCG00011748 NA coding upstream 253794 3199687 ~ 3201575 (-)
G132166 NA non-coding downstream 212009 2725667 ~ 2726283 (-)
G132155 NA non-coding downstream 290904 2645573 ~ 2647388 (-)
G132151 NA non-coding downstream 303340 2634296 ~ 2634952 (-)
G132138 NA non-coding downstream 385033 2552358 ~ 2553259 (-)
G132137 NA non-coding downstream 387172 2550456 ~ 2551120 (-)
G132233 NA non-coding upstream 55144 3001037 ~ 3042256 (-)
G132261 NA non-coding upstream 132638 3078531 ~ 3089532 (-)
G132362 NA non-coding upstream 337928 3283821 ~ 3289291 (-)
G132392 NA non-coding upstream 474383 3420276 ~ 3432121 (-)
G132395 NA non-coding upstream 495502 3441395 ~ 3457472 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other downstream 294836 2642663 ~ 2643456 (-)
AMCG00011711 neurl4,LOC106577658 other downstream 320964 2609728 ~ 2617328 (-)
G132140 NA other downstream 360455 2566745 ~ 2577837 (-)
G132117 NA other downstream 476542 2461107 ~ 2461750 (-)
G131863 NA other downstream 641839 2293633 ~ 2296453 (-)
AMCG00011741 LOC107676000,LOC107586166 other upstream 223815 3169708 ~ 3173836 (-)
G132352 NA other upstream 255477 3201370 ~ 3207354 (-)
AMCG00011745 NA other upstream 290246 3236139 ~ 3240000 (-)
AMCG00011765 NA other upstream 923939 3869832 ~ 3879185 (-)
AMCG00011775 NA other upstream 991591 3937484 ~ 3944519 (-)

Expression


Co-expression Network