AMCG00011731


Basic Information

Item Value
gene id AMCG00011731
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 2900649 ~ 2909919 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011731
GTCCGCCGCGAGACGGGAGAGAAGAGGTTCGAGAGGCCGGTTAACTGCGGCTGCGCACTGGGTCTCCGGGACTTCACTGCTGTGGTCTGGAGCCAGGCAGCGGCACCAGCttgtttcccccccaccccagcagAAATGGCTCTGAGCGAATGTGTCTTCAACAACAACGAGAGACGCGACCGTCTCTGCCGGCTCAACCAGACAATCGTGGAGAAGATAAAGAACAACTTCCGCGCCACCAACAAGCTCTCCGAGGTCCTGAACGAGCACTTCAGCTGCAGGTTCCAGCCCATCGCCGTGGACGAGGGCAAGACGGTGAAGGAGAACTGCGACTTCTTCCTGAAAGCACTGATGAAGATCCAGGCAAAGATCGAGGAGATCGACAGCAGGCTGAAGGAAAAACTTGAGCCCCATTGTTACCAGGAGATCCTGGCCATGAAAACGCCTTCGACTGAACAATGGAGGAAGGTGCACAATGCACTGAACGGGGTCGTTTCTGTTGTCTCCGTGATTGCTTGTGAGAAGAGTAAGCTGGATGATGCCATCAGAGAGCACGAGAAGGTGCTGGAGGAGTTTGGGCCGGCCTCTGATGCCTACTATGATGAGAAGAGTAGGCTGGATGATGCCATCAGAGAGCATGAGAAGGTGCTGACCGACTTTGGGCCGGCCTCTGATGCCTACTCTGATACTATCACA

Function

GO: NA

KEGG:

id description
ko04612 Antigen processing and presentation

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011731 True 696 mRNA 0.56 4 2900649 2909919

Neighbor

gene id symbol gene type direction distance location
AMCG00011725 NA coding downstream 800 2896690 ~ 2899849 (-)
AMCG00011732 NA coding downstream 10363 2885651 ~ 2890286 (-)
AMCG00011728 fis1,LOC106577644 coding downstream 15226 2877276 ~ 2885423 (-)
AMCG00011722 NA coding downstream 29689 2864673 ~ 2870960 (-)
AMCG00011720 NA coding downstream 37234 2858086 ~ 2863415 (-)
AMCG00011729 NA coding upstream 9922 2919841 ~ 2922231 (-)
AMCG00011726 NA coding upstream 28373 2938292 ~ 2945893 (-)
AMCG00011727 NA coding upstream 44518 2954437 ~ 2962627 (-)
AMCG00011730 NA coding upstream 65632 2975551 ~ 2984794 (-)
AMCG00011734 NA coding upstream 145997 3055916 ~ 3065952 (-)
G132166 NA non-coding downstream 174366 2725667 ~ 2726283 (-)
G132155 NA non-coding downstream 253261 2645573 ~ 2647388 (-)
G132151 NA non-coding downstream 265697 2634296 ~ 2634952 (-)
G132138 NA non-coding downstream 347390 2552358 ~ 2553259 (-)
G132137 NA non-coding downstream 349529 2550456 ~ 2551120 (-)
G132233 NA non-coding upstream 91118 3001037 ~ 3042256 (-)
G132261 NA non-coding upstream 168612 3078531 ~ 3089532 (-)
G132362 NA non-coding upstream 373902 3283821 ~ 3289291 (-)
G132392 NA non-coding upstream 510357 3420276 ~ 3432121 (-)
G132395 NA non-coding upstream 531476 3441395 ~ 3457472 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other downstream 257193 2642663 ~ 2643456 (-)
AMCG00011711 neurl4,LOC106577658 other downstream 283321 2609728 ~ 2617328 (-)
G132140 NA other downstream 322812 2566745 ~ 2577837 (-)
G132117 NA other downstream 438899 2461107 ~ 2461750 (-)
G131863 NA other downstream 604196 2293633 ~ 2296453 (-)
AMCG00011741 LOC107676000,LOC107586166 other upstream 259789 3169708 ~ 3173836 (-)
G132352 NA other upstream 291451 3201370 ~ 3207354 (-)
AMCG00011745 NA other upstream 326220 3236139 ~ 3240000 (-)
AMCG00011765 NA other upstream 959913 3869832 ~ 3879185 (-)
AMCG00011775 NA other upstream 1027565 3937484 ~ 3944519 (-)

Expression


Co-expression Network