AMCG00011742


Basic Information

Item Value
gene id AMCG00011742
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 3136985 ~ 3138296 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011742
ATGAAGACTGCAGTTTTGGTGGTGGCTCTGCTGTTTGGACAGCTGGGATTGTGTGAAGACCTGTCGGGCAAAGTCTTCATCTTTCCCGAGTACTCCGACACGGCGCACGTAAAGCTGTTTCCCTACAAAGAAGCCCCCCTGTACGCCTTCACCGCCTGCCTGCGCTTCATCTCCGACAGGCCGTTGGGGGCGCTGTTTTCCATCGCCACCCGAGAGATGCACAACGGCATTCTGCTACTAAAAGAACGCTCTGGATTCTATCAGGTCTACATCCAAAACCAAATGGTTGACTTCGTGGCCGTGGAAAAGCGCCCACCCGAATGGAACCACGTCTGCGCCACGTGGGAGTCGGGCACCGGCCTCGTCCAGCTGTGGGTGAACGGAGTGGGCAGCGTATTTCAGGGGCTGAACCGCGGCGGTTCCGTGGGGCCCCTGCCCAGCATTGTCCTCGGGCAGGACCAAGACAACTACGGGGGTGGCTTCCAAATCCATCAAAGCTTCCAGGGGCAGATTTCGGACGTACACCTGTGGGATCACGTTCTGCCGCCCTGCGAGATCTTCGACGTCAGCCGGGGTTCCACCTCCACGCAGGGGAACGTGCTGAATTGGCGAGCGATGCGCTACAGCATGGCCGGCTACGTCATCCTCAGGCAGGAGCCGAACCTGCGGCCCGATTGCTCCTGCACCAGAGAGGAGCAGTGGACCAGGGGAGCCGAGGTGAACGCCATTGAAACGTCCCAGTCCGGCGTGTCAAACTCCAGTACCGTGAATGGCCCAAGTGTGTTCTAG

Function

GO:

id name namespace
GO:0006814 sodium ion transport biological_process

KEGG:

id description
ko04614 Renin-angiotensin system
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011742 True 789 mRNA 0.59 2 3136985 3138296

Neighbor

gene id symbol gene type direction distance location
AMCG00011734 NA coding downstream 71033 3055916 ~ 3065952 (-)
AMCG00011730 NA coding downstream 152191 2975551 ~ 2984794 (-)
AMCG00011727 NA coding downstream 174358 2954437 ~ 2962627 (-)
AMCG00011726 NA coding downstream 191092 2938292 ~ 2945893 (-)
AMCG00011729 NA coding downstream 214754 2919841 ~ 2922231 (-)
AMCG00011748 NA coding upstream 61391 3199687 ~ 3201575 (-)
AMCG00011746 NA coding upstream 65256 3203552 ~ 3207354 (-)
AMCG00011747 NA coding upstream 73428 3211724 ~ 3214816 (-)
AMCG00011744 NA coding upstream 103904 3242200 ~ 3253579 (-)
AMCG00011751 NA coding upstream 205138 3343434 ~ 3348414 (-)
G132261 NA non-coding downstream 47453 3078531 ~ 3089532 (-)
G132233 NA non-coding downstream 94729 3001037 ~ 3042256 (-)
G132166 NA non-coding downstream 410702 2725667 ~ 2726283 (-)
G132155 NA non-coding downstream 489597 2645573 ~ 2647388 (-)
G132151 NA non-coding downstream 502033 2634296 ~ 2634952 (-)
G132362 NA non-coding upstream 145525 3283821 ~ 3289291 (-)
G132392 NA non-coding upstream 281980 3420276 ~ 3432121 (-)
G132395 NA non-coding upstream 303099 3441395 ~ 3457472 (-)
G132434 NA non-coding upstream 429591 3567887 ~ 3568440 (-)
G132482 NA non-coding upstream 490466 3628762 ~ 3702912 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other downstream 493529 2642663 ~ 2643456 (-)
AMCG00011711 neurl4,LOC106577658 other downstream 519657 2609728 ~ 2617328 (-)
G132140 NA other downstream 559148 2566745 ~ 2577837 (-)
G132117 NA other downstream 675235 2461107 ~ 2461750 (-)
G131863 NA other downstream 840532 2293633 ~ 2296453 (-)
AMCG00011741 LOC107676000,LOC107586166 other upstream 31412 3169708 ~ 3173836 (-)
G132352 NA other upstream 63074 3201370 ~ 3207354 (-)
AMCG00011745 NA other upstream 97843 3236139 ~ 3240000 (-)
AMCG00011765 NA other upstream 731536 3869832 ~ 3879185 (-)
AMCG00011775 NA other upstream 799188 3937484 ~ 3944519 (-)

Expression


Co-expression Network