AMCG00011745


Basic Information

Item Value
gene id AMCG00011745
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 3236139 ~ 3240000 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011745
GGGGGAGTGAGAGACCCGGGGGCTCAGTTTACACCCAGGtgagaggagactacgtggagGTAGAGCTGAAGAAATAACCCCTTCCTCTCTATTACCAGCACCAATCCGGCACAACAAGGGGGGTTATTTGGTAACAGAAAACAGACGGTGGGAATACAGGCACTGGTCTCTAAACGGAATGAAATAAGTGTCGGAACCCCACTCCCTTCCTGGACCTCCCGGCGTCCCCGATGATGGAGAAAAAGAgcgagggagagaaagagaggcagagCGCGTggggagaggagaaggagagcgaCGAGGCTGAGATTTGTGATCGGGCAGCCCCGACCTGGGGAAagatgaaggaggaggaggaggaagaagagaggtCCTCGGAGGATGACATGGGCCTACCCATCATGCACTGGGAGGCACTGAGTCTGCGCATCGCCGAGCTGGAGcggcaggaggaagagaggcGAGTCAAGggagaggaggaggaggaggaggaggaggaggaggaggaagaggagagagagCCTGGCCTGCGGAGGGGCGGAGACGGTGGGCGTGGGTCTGCGCGGGAGGCCCCACCCCTGGCGTCTGTTGCCAGGGATGACTGGAGTGAGCGCCGGGCACAGCTGCGGAGGGAGGCGCAGGCGGCACTGAGCGCGCTCCAAGAGAGACGGGCCTCTGCGCAGAGAGAGTCCAGCGCAGGCTCAGCGGCGGCGCTGAGGAAGAGGCAGCGGCTGGAGCGCTGTGAACTTCAACACCTGACCCCTGAGCAGCTGGGTACCCTGAGGGACACCCTGAGCCAGGCCACACAGGATCTGAGCTCGGAGCTGGTGCGGCTGCTGCTGATCCGGGACGCCCTGCGCAGCGAGCACGACGCCCTGCTGCTGGAGGTGGAGGATCTGACCTCGCCCTAATCTCTCACCCAGTGACCTCACACTCCAGACCCTTTCGGAGTCCTCACTCGTTGTGCGACATCACTACCACCTTCCCTATCAGCTGGAATGGCACCACCAGTGACATCACTCTCATCTCCTCCTTGCTGCTATGACGTAACTTTCATCTCCCTGCTGCCGTGATATCACTCTCAACACCTCCCTGCTGCAGCGACATCACTGTAACGTCTCACACTGCGGGGCTGTGATCCATTCCCTGCCGGACACATGCAGCCCGACTCTGACTAGACTATGGCGGTTcgttttgtgattttatttgtgttttttaggtTTACATTTTTGCTTGATCTTATCTTTGGAGAAACCGAGGGAGTGGGGGGATAATGACTTCTTGACATTGATGATGCAATGACAGTACTGTGAGACCTCCCTTGCTGTGGTGGTGGAGAAGTCCAGACCGTCCAGTGTTACGGCCAATTGTTGCATTAAACCCTGCAGGGCTGATGGGCAGCTTGTCCTTCACTATCGGACTGACTCCAGTGACTCGAGTTACATCCCTGAGCACACGGCACTGGACCGTCCTGCACTGGCCACTCGAGGACCAGATGCGTAAACCACTTTCAGCATTGGAACAACCACCACTCCTGTCCCAGTGTGCAGCCCCATCACTGTGCGATCAATTTAAAGAGTGACACCGGGCTCAGCTCTCAGACAGGGGCAGCACAAGCTGAGTGGTAAATTGCTGTACTTCTCACCGTCTGGGTTTCTGGtttaaaaaacgaaacaaacagCAAGACTCATCTGTCAGCGAAGTGGAATCGGGAAGAATTGTGTGGGATCCCACTCTTGGACTTAAAGGGATTTATTTGGCGTGTGACTCTTTTAATAAATTCGCCTTTCCTCTGCATCGATCGCCTTTCAATAAacctttcattaaaacaaaaaagctgtcAGATTTCTTAGAAAGAAATGAGCGGCATGAAATATAAGTAACTATAtcttaatagttttttttacgAGGGaagcatttaaacaaatacgTATTTCAGGCTCTGAT
>TU165979
AGCCTGGCCTGCGGAGGGGCGGAGACGGTGGGCGTGGGTCTGCGCGGGAGGCCCCACCCCTGGCGTCTGTTGCCAGGGATGACTGGAGTGAGCGCCGGGCACAGCTGCGGAGGGAGGCGCAGGCGGCACTGAGCGCGCTCCAAGAGAGACGGGCCTCTGCGCAGAGAGAGTCCAGCGCAGGCTCAGCGGCGGCGCTGAGGAAGAGGCAGCGGCTGGAGCGCTGTGAACTTCAACACCTGACCCCTGAGCAGCTGGGTACCCTGAGGGACACCCTGAGCCAGGCCACACAGGATCTGAGCTCGGAGCTGGTGCGGCTGCTGCTGATCCGGGACGCCCTGCGCAGCGAGCACGACGCCCTGCTGCTGGAGGTGGAGGATCTGACCTCGCCCTAATCTCTCACCCAGTGACCTCACACTCCAGACCCTTTCGGAGTCCTCACTCGTTGTGCGACATCACTACCACCTTCCCTATCAGCTGGAATGGCACCACCAGTGACATCACTCTCATCTCCTCCTTGCTGCTATGACGTAACTTTCATCTCCCTGCTGCCGTGATATCACTCTCAACACCTCCCTGCTGCAGCGACATCACTGTAACGTCTCACACTGCGGGGCTGTGATCCATTCCCTGCCGGACACATGCAGCCCGACTCTGACTAGACTATGGCGGTTcgttttgtgattttatttgtgttttttaggtTTACATTTTTGCTTGATCTTATCTTTGGAGAAACCGAGGGAGTGGGGGGATAATGACTTCTTGACATTGATGATGCAATGACAGTACTGTGAGACCTCCCTTGCTGTGGTGGTGGAGAAGTCCAGACCGTCCAGTGTTACGGCCAATTGTTGCATTAAACCCTGCAGGGCTGATGGGCAGCTTGTCCTTCACTATCGGACTGACTCCAGTGACTCGAGTTACATCCCTGAGCACACGGCACTGGACCGTCCTGCACTGGCCACTCGAGGACCAGATGCGTAAACCACTTTCAGCATTGGAACAACCACCACTCCTGTCCCAGTGTGCAGCCCCATCACTGTGCGATCAATTTAAAGAGTGACACCGGGCTCAGCTCTCAGACAGGGGCAGCACAAGCTGAGTGGTAAATTGCTGTACTTCTCACCGTCTGGGTTTCTGGtttaaaaaacgaaacaaacagCAAGACTCATCTGTCAGCGAAGTGGAATCGGGAAGAATTGTGTGGGATCCCACTCTTGGACTTAAAGGGATTTATTTGGCGTGTGACTCTTTTAATAAATTCGCCTTTCCTCTGCATCGATCGCCTTTCAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011745 True 1947 mRNA 0.55 6 3236139 3240000
TU165979 False 1294 lncRNA 0.56 3 3236273 3237913

Neighbor

gene id symbol gene type direction distance location
AMCG00011747 NA coding downstream 21323 3211724 ~ 3214816 (-)
AMCG00011746 NA coding downstream 28785 3203552 ~ 3207354 (-)
AMCG00011748 NA coding downstream 34564 3199687 ~ 3201575 (-)
AMCG00011742 NA coding downstream 97843 3136985 ~ 3138296 (-)
AMCG00011734 NA coding downstream 170187 3055916 ~ 3065952 (-)
AMCG00011744 NA coding upstream 2200 3242200 ~ 3253579 (-)
AMCG00011751 NA coding upstream 103434 3343434 ~ 3348414 (-)
AMCG00011752 NA coding upstream 110453 3350453 ~ 3357400 (-)
AMCG00011753 NA coding upstream 124086 3364086 ~ 3391464 (-)
AMCG00011756 NA coding upstream 259640 3499640 ~ 3502460 (-)
G132261 NA non-coding downstream 146607 3078531 ~ 3089532 (-)
G132233 NA non-coding downstream 193883 3001037 ~ 3042256 (-)
G132166 NA non-coding downstream 509856 2725667 ~ 2726283 (-)
G132155 NA non-coding downstream 588751 2645573 ~ 2647388 (-)
G132151 NA non-coding downstream 601187 2634296 ~ 2634952 (-)
G132362 NA non-coding upstream 43821 3283821 ~ 3289291 (-)
G132392 NA non-coding upstream 180276 3420276 ~ 3432121 (-)
G132395 NA non-coding upstream 201395 3441395 ~ 3457472 (-)
G132434 NA non-coding upstream 327887 3567887 ~ 3568440 (-)
G132482 NA non-coding upstream 388762 3628762 ~ 3702912 (-)
G132352 NA other downstream 28785 3201370 ~ 3207354 (-)
AMCG00011741 LOC107676000,LOC107586166 other downstream 62303 3169708 ~ 3173836 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other downstream 592683 2642663 ~ 2643456 (-)
AMCG00011711 neurl4,LOC106577658 other downstream 618811 2609728 ~ 2617328 (-)
G132140 NA other downstream 658302 2566745 ~ 2577837 (-)
AMCG00011765 NA other upstream 629832 3869832 ~ 3879185 (-)
AMCG00011775 NA other upstream 697484 3937484 ~ 3944519 (-)
G132642 NA other upstream 924631 4164631 ~ 4166439 (-)
G132667 NA other upstream 978549 4218549 ~ 4218983 (-)
G132693 NA other upstream 1234605 4474605 ~ 4476979 (-)

Expression


Co-expression Network