AMCG00011756


Basic Information

Item Value
gene id AMCG00011756
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 3499640 ~ 3502460 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011756
ATGCGCTTCATGCTGCTGTTCAGCCGGCAGGGGAAGCTGCGCCTGCAGAAGTGGTACACGGCCACGTCGGAGCGTGACAAGAAGAAGATGGTGCGTGAGCTGATGCAGGTAGTGCTCGCCCGCAAGCCCAAGATGTGCAGCTTTCTGGAGTGGAGGGACCTCAAGATCGTGTGCGAGTTGGACATCATCTTTAACTTCGAGAAGGCCTACTTCATTCTGGATGAGTTCCTGATGGGCGGCGAGATCCAGGACACGTCCAAGAAGAGCGTGCTCAAGGCCATCGAGCAGGCCGACCTGCTGCAGGAGGTGCGTTCACCTTTCGTACTGGCCCTCGACCCACGGGCCCCCTCACACCGGCGGCCCCCCGGCCCTGGTGCTGGAGCACGGATCGGCTGGGTTCTCCTTCCAAACTGACCCATAACTGGACACTGGAGAGCGACAGGGTGTTCTAAATGGTTCTATGGTTCTAAAACGAATAAAAGCTTATACATCTATGGAGTGAATTCCAACACCAGCTGTACCTATTAATTCTACACTTGGCATTAACCTCTTACCCAATTATAGAATCTTACATGCGTCATTTAGCTATATTTCCAAAAGGTAATCGATCATGCTTTCATGCTacgacacacaaacaaattaccTTTTGTAGCTCCTCCATTGATGGCGCTCTTGACGTCTTTATACACTTGACCTACATGTCGAGAGACTGCGGAGCCGGGGTGACGTCACCGACAGGAACGATATTCGTGTCTGATTACCGCTGGACGAGGAGGTGTAGCATTTACATCTCTTACGGCCACTCGTCCCTGTATACGTTTAACATTTTCAGCACGGCTCTGCTACTGCTTTGTCCGCTTCCACAGATGTCCGCTCAAAAacgatttttttcccctgtgttGCTTTATGTGAGACCCCTGTCCCTTCTCAGAAACGCAAGCTTTTGTAACGGGTCTTTTGTCACCTCCTCCATTCTTTTCTAAAATAGTAAACCCCTAACCTTCATGGTGACAGGTGTCTTTGTACTTCATTGGTTAAGTGAATTGGTTTCAAATTCTGACATCTGATATTGATTGGCTTGAAGGATAACCGTGTGACCTACAGTATCGGTGTTCGGTATGTGGcgtttaattacttttaaaagaaaaaatgtcctGTTCCTGCTTTTTACCGGGAGCTTAAATCCCCGTTCTTGCCCGTCttgaaacctttattttttaaaatgtccccATCCTGCCCGGTCCTGTGAGCTTCATACCTGTACTGTCCCATcccacaacatttttaaaaacatttccccaTCCCGTAGTACTCTCTACTGGACACTCAAACGGCTCTTGTTTCTCTTTCTAATTTCCTcttactttttttattctttttcctTAATGtcctatttctctctctcttacaggAAGACGAATCCCCACGAAGCGTGTTGGAAGAAATGGGCTTAGCATAGCGGGGCCGGCGCCGATTCGGAGCCGACCACTGGGCCAGActgagacggagagagagagggat

Function

GO:

id name namespace
GO:0030198 extracellular matrix organization biological_process
GO:0007399 nervous system development biological_process
GO:0006810 transport biological_process
GO:0048471 perinuclear region of cytoplasm cellular_component
GO:0005886 plasma membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011756 True 1521 mRNA 0.49 2 3499640 3502460

Neighbor

gene id symbol gene type direction distance location
AMCG00011753 NA coding downstream 108176 3364086 ~ 3391464 (-)
AMCG00011752 NA coding downstream 142240 3350453 ~ 3357400 (-)
AMCG00011751 NA coding downstream 151226 3343434 ~ 3348414 (-)
AMCG00011744 NA coding downstream 246061 3242200 ~ 3253579 (-)
AMCG00011747 NA coding downstream 284824 3211724 ~ 3214816 (-)
AMCG00011758 NA coding upstream 12909 3515369 ~ 3520747 (-)
AMCG00011757 NA coding upstream 44373 3546833 ~ 3560686 (-)
AMCG00011760 NA coding upstream 110392 3612852 ~ 3620728 (-)
AMCG00011768 NA coding upstream 294225 3796685 ~ 3800396 (-)
AMCG00011766 NA coding upstream 298512 3800972 ~ 3802909 (-)
G132395 NA non-coding downstream 42168 3441395 ~ 3457472 (-)
G132392 NA non-coding downstream 67519 3420276 ~ 3432121 (-)
G132362 NA non-coding downstream 210349 3283821 ~ 3289291 (-)
G132261 NA non-coding downstream 410108 3078531 ~ 3089532 (-)
G132233 NA non-coding downstream 457384 3001037 ~ 3042256 (-)
G132434 NA non-coding upstream 65427 3567887 ~ 3568440 (-)
G132482 NA non-coding upstream 126302 3628762 ~ 3702912 (-)
G132504 NA non-coding upstream 251368 3753828 ~ 3785207 (-)
G132507 NA non-coding upstream 285772 3788232 ~ 3788441 (-)
G132509 NA non-coding upstream 289759 3792219 ~ 3792505 (-)
AMCG00011745 NA other downstream 259640 3236139 ~ 3240000 (-)
G132352 NA other downstream 292286 3201370 ~ 3207354 (-)
AMCG00011741 LOC107676000,LOC107586166 other downstream 325804 3169708 ~ 3173836 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other downstream 856184 2642663 ~ 2643456 (-)
AMCG00011711 neurl4,LOC106577658 other downstream 882312 2609728 ~ 2617328 (-)
AMCG00011765 NA other upstream 367372 3869832 ~ 3879185 (-)
AMCG00011775 NA other upstream 435024 3937484 ~ 3944519 (-)
G132642 NA other upstream 662171 4164631 ~ 4166439 (-)
G132667 NA other upstream 716089 4218549 ~ 4218983 (-)
G132693 NA other upstream 972145 4474605 ~ 4476979 (-)

Expression


Co-expression Network