AMCG00011758


Basic Information

Item Value
gene id AMCG00011758
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 3515369 ~ 3520747 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011758
CACAGACTACACAGAAACACTGTCAATAGTCTGAGAGCAACAGAGAGGAGGTCTGAGGTCTGAGATCAGAACGAGGTTCAGACACACAGGACGGGACGGAACTCGCAAGCCAGCTGCACACATCTGGAGCTAGAGCGGCACAGCTGTactctgagaaataaataaacaaagaagaaaagttTCTTGAGAAAATGTTTTGGCAAAAGATCAGGATGCATGCAGCAGTGCTTCTGATTTGCCTGGCTGGGGCAGCCTTAGCAGGGTCGGTGCAGGAGCGGCAGGTGGATTTCGGGCTGCGTGTCTTCCGGGAGGTGGCGCGCTCGGCCCCAGAGGAGGGCAACCTGGTATTCTCCCCCTACGGCGTGGCGGTGGTGATGGGCATGGTGCAGCTTGGTGCGGCCGGCAGCACCCTCAAACAGCTGAACGCACAGATGGGCTACTCCCTGCAAGagcGGGGGGTACCTCGGCAGCAACGTCTCCTGCAGAAGCAGCTGTCAGCTGAGGATGCACTGACAATGGTGAGTGGGACGATGGTGGACAGGAGACTGCGCATGGAGAAGGCGTTCAAGAGAGGACTGAACAAGAGCTTCCTGAGCGGCGTGCACCAGCTGGACTACAGCGACCCTGAGACCGCCCTGAGGGTCATCAACGCCTGGGTGGCCGACCAGACCGAGGGTTCCATCTCTGACTTCCTGGCACTGGGCTCGGTCACCGATGAGACTCGCCTAGTCCTCCTCAACGCCATTCACTTCCAGGGGCGCTGGAGGGTGCCCTTTGACCCCAAGATGACCCACGAGCGGGTCTTCCACTGTGCCAATGGGAGCACGGTGTCCGTTCCCATGATGCAGCTGACCGACCGCTTCAATTACGgGGAATTCATGACTGCCGACGGAGTGGGGTATGATGTCATTGAGCTGCCCTATGAAGGAGACACAATGAGCATGCTCCTGGTGTCACCTTTTGACCGGGACACACCCCTCTCAGCCCTGACACAGGGTCTGGATGGGCGGAGCCTGCGCGAGTGGAGGGCTGGGCTGCGGAAGACGAGCAGACAGCTGGTTCTGccaagGTTCACCATTGACTCTGAATCAGACCTAAATGAGGCCCTGACCCGCTTGGGCTTGGGTGAGATCTTCAACCAGTGGAAGGCAGACTTCTCTCGCATCTCCGcagACGAGATGCTATCTGTGTCCAAGGTCCTGCAGAGAGTGAAGATCGAAGTGGACGAGGAAGGGACAACGGGGTCTGCTGCCACTGctgcTATCATCTACTCCCGCATGGCCATTGAGGAGTTGACCATGGACCGGCCCTTCCTGTTTGTGGTTCAGCACAAACCCACAGgTGCTGTTCTGTTTATGGGTCAAGTGATGGCTCCAGAGGAGCACTGA

Function

GO:

id name namespace
GO:0005615 extracellular space cellular_component

KEGG:

id description
K03982 SERPINE1, PAI1; plasminogen activator inhibitor 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011758 True 1388 mRNA 0.58 9 3515369 3520747

Neighbor

gene id symbol gene type direction distance location
AMCG00011756 NA coding downstream 12909 3499640 ~ 3502460 (-)
AMCG00011753 NA coding downstream 123905 3364086 ~ 3391464 (-)
AMCG00011752 NA coding downstream 157969 3350453 ~ 3357400 (-)
AMCG00011751 NA coding downstream 166955 3343434 ~ 3348414 (-)
AMCG00011744 NA coding downstream 261790 3242200 ~ 3253579 (-)
AMCG00011757 NA coding upstream 26086 3546833 ~ 3560686 (-)
AMCG00011760 NA coding upstream 92105 3612852 ~ 3620728 (-)
AMCG00011768 NA coding upstream 275938 3796685 ~ 3800396 (-)
AMCG00011766 NA coding upstream 280225 3800972 ~ 3802909 (-)
AMCG00011764 LOC108434652 coding upstream 290779 3811526 ~ 3820077 (-)
G132395 NA non-coding downstream 57897 3441395 ~ 3457472 (-)
G132392 NA non-coding downstream 83248 3420276 ~ 3432121 (-)
G132362 NA non-coding downstream 226078 3283821 ~ 3289291 (-)
G132261 NA non-coding downstream 425837 3078531 ~ 3089532 (-)
G132233 NA non-coding downstream 473113 3001037 ~ 3042256 (-)
G132434 NA non-coding upstream 47140 3567887 ~ 3568440 (-)
G132482 NA non-coding upstream 108015 3628762 ~ 3702912 (-)
G132504 NA non-coding upstream 233081 3753828 ~ 3785207 (-)
G132507 NA non-coding upstream 267485 3788232 ~ 3788441 (-)
G132509 NA non-coding upstream 271472 3792219 ~ 3792505 (-)
AMCG00011745 NA other downstream 275369 3236139 ~ 3240000 (-)
G132352 NA other downstream 308015 3201370 ~ 3207354 (-)
AMCG00011741 LOC107676000,LOC107586166 other downstream 341533 3169708 ~ 3173836 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other downstream 871913 2642663 ~ 2643456 (-)
AMCG00011711 neurl4,LOC106577658 other downstream 898041 2609728 ~ 2617328 (-)
AMCG00011765 NA other upstream 349085 3869832 ~ 3879185 (-)
AMCG00011775 NA other upstream 416737 3937484 ~ 3944519 (-)
G132642 NA other upstream 643884 4164631 ~ 4166439 (-)
G132667 NA other upstream 697802 4218549 ~ 4218983 (-)
G132693 NA other upstream 953858 4474605 ~ 4476979 (-)

Expression


Co-expression Network