AMCG00011760


Basic Information

Item Value
gene id AMCG00011760
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 3612852 ~ 3620728 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011760
ATGTCGCGCTGGATTGCAATGACTGATGCCGACTGCCAGAGGCACTGCCGAGCCGAATtgTACTTGAACAATGGCTGTCAGCGAGACCTGTTGGACGCAGGAGGCCCTATGCGCAGGGCCAGGCTGAAGGAGTACAGCAGCAACCCCCTGAGGAGATTGAATCACTGCGACCGTGACCGGGGAGGCAGCTGGTTCAAAGTGACGATCCTCTGCAGGGAGAAGTACGACAAGTCGTTGCTGCTGACCGCCCTGCGGGGCCTGTGCACCGTGCCTTTCATCCCAGTACAGtaTCACTACAAGGGTAATAGGGTGGTGTTCTACGTGTACATCGTCATGAACCgcagccccccgccccccagcgTGCTGCACAGACTGAAGCCGGAGGACCTGGAGCAACTGAAGcaatGTATGAGTAAGCGTTTTGATGCTTCTCCGCAAGCTCTGGACCTCAGCAGCATTCGCACTGACCCAGACCTGGCGTCTCGGAATATCGAGGTGATTCTGAACAGGACGTGCGGCATGCAGGACGTCAATGACATCATCGAGGAGAACATCCCTGAGcTCCTCTCTCTGAACCTCAGCAACAACAGACTCTACAAACTGGACGAAGTCTCTGAGCTGGTGAGAAAAGTGCCCAACCTGAAGATCCTCAACCTCTCCCACAACGAGCTGAAGTCAGAGAGGGTTCTGGACAAGGTGAAGGGTTTCAAGCTGGAGGAGCTGTGGCTGGAGCACAACCCCATGTGTGAAAACTTCAAAGACCAGCCATCGTACAtcagCGCCATCAGAAAGAAGTTCCCCCAACTGCTCAGGCTGgaTGGTCATGTCCTCCCCAGACTGATAACATTTGAGATTGACTCCCCAACAACACTCCTGGCCTGCAAGggCAGTACTTCTGTGGGTAGGAAGGTGAAAAGAGTGATTCAGCACTTCCTGCAGGAGTGCAGTCTGGAAGGTTACAAGACCAGTTCCAATGTCAAAGAACCGAAAGACCCCACCTCGTGGTTCCATCTGCAGAAGCAAACACGCCAGGGCGTGGTGTCCCTGCTGAACGAGCTGCCCAAGACGCAGCACGACCCCAGCTCCTTCGTGGTGGATGTCCACACCAGCACTaaaAAGATACTGTCCTTCACCGTCACTGGAGTGTTTAAAGAAGtgaaCGAGAAGTCTGGAGACTCAGTGCGCATGTTCTCGCGCACGTTCATCACAGTCCCTGCAGCAAACTCTGGgCTCTGTATTGTGAACGATGAGCTGTTTGTGCGGAATGCGAAGCCGGAGATGATCAGACGGGCGTTCGCCACGTTGGCCCCCATGCCACCCAGCAGCTCCGTGCCCAGACTGACTGCTAAGCAGCAAAAGATGCTGTCCATCTTCTCCACGCGGTCCCGCATGAACCTGGAGTGGTCACAGAAGTGTCTACAGGACAATGCATGGGATTTCAACAGAGCCTCACAGATCTTCACCCAGCTCAAGCCACAAATTATTTAGTGTTGTAGTTGGTAAGGGAAGGTTTGTAATAGACTGATCCGTCATTGTCACTGTAGTGGAAAAGCCTGCTGCCCTCCACTGCCANTTTCACTTTGCCACTGTCCTTCTCTCCCCACCGGGATGGAAACACTCTTTTACATGTGCCTCTCTGTGACAGTTCTGGCCCACAGACAGGTTATTCTTTGTGTGTACTGCTCCTTCCTGTTCCTAtatatgtttt

Function

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005622 intracellular anatomical structure cellular_component

KEGG:

id description
K14284 NXF, TAP, MEX67; nuclear RNA export factor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011760 True 1708 mRNA 0.54 21 3612852 3620728

Neighbor

gene id symbol gene type direction distance location
AMCG00011757 NA coding downstream 52166 3546833 ~ 3560686 (-)
AMCG00011758 NA coding downstream 92105 3515369 ~ 3520747 (-)
AMCG00011756 NA coding downstream 110392 3499640 ~ 3502460 (-)
AMCG00011753 NA coding downstream 221388 3364086 ~ 3391464 (-)
AMCG00011752 NA coding downstream 255452 3350453 ~ 3357400 (-)
AMCG00011768 NA coding upstream 175957 3796685 ~ 3800396 (-)
AMCG00011766 NA coding upstream 180244 3800972 ~ 3802909 (-)
AMCG00011764 LOC108434652 coding upstream 190798 3811526 ~ 3820077 (-)
AMCG00011767 NA coding upstream 220943 3841671 ~ 3846196 (-)
AMCG00011763 NA coding upstream 225747 3846475 ~ 3852387 (-)
G132434 NA non-coding downstream 44412 3567887 ~ 3568440 (-)
G132395 NA non-coding downstream 155380 3441395 ~ 3457472 (-)
G132392 NA non-coding downstream 180731 3420276 ~ 3432121 (-)
G132362 NA non-coding downstream 323561 3283821 ~ 3289291 (-)
G132261 NA non-coding downstream 523320 3078531 ~ 3089532 (-)
G132482 NA non-coding upstream 8034 3628762 ~ 3702912 (-)
G132504 NA non-coding upstream 133100 3753828 ~ 3785207 (-)
G132507 NA non-coding upstream 167504 3788232 ~ 3788441 (-)
G132509 NA non-coding upstream 171491 3792219 ~ 3792505 (-)
G132523 NA non-coding upstream 178143 3798871 ~ 3799286 (-)
AMCG00011745 NA other downstream 372852 3236139 ~ 3240000 (-)
G132352 NA other downstream 405498 3201370 ~ 3207354 (-)
AMCG00011741 LOC107676000,LOC107586166 other downstream 439016 3169708 ~ 3173836 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other downstream 969396 2642663 ~ 2643456 (-)
AMCG00011711 neurl4,LOC106577658 other downstream 995524 2609728 ~ 2617328 (-)
AMCG00011765 NA other upstream 249104 3869832 ~ 3879185 (-)
AMCG00011775 NA other upstream 316756 3937484 ~ 3944519 (-)
G132642 NA other upstream 543903 4164631 ~ 4166439 (-)
G132667 NA other upstream 597821 4218549 ~ 4218983 (-)
G132693 NA other upstream 853877 4474605 ~ 4476979 (-)

Expression


Co-expression Network