AMCG00011762


Basic Information

Item Value
gene id AMCG00011762
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 3855409 ~ 3869281 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011762
AtgatctgcgcagacctgcacaGTCCCGCCACTCTCATGGtcggagcagcgcagacctcTGTGCACATGCGCAGTTGTTGCGCCCTTTCCCGCCGAGACCCGGCTGCGTCGTTATCTGGTGCTGTCGCTGTCTCTCTTCCTGAAGCAATGAAGGCCATGAGGGCTGGGCGGCAGACTTCCCTAGGGAGGCGTGGCTCGCCGCTGCAAAACCCCTCCCTCTCAGTCAGGAACCAATCAGGGCTCGACATGTCCTCTCCCAGCTCCAATGGGAGAGCAGTGGCCCTGTACAGCCCCGCCCCTTTTATTACGCTCCAATCCGTGTTGGGGGAGGAGCCAGAGGACGATGGCCGTGATAGCGAGGAGTGGGACGAGCTCTCGGAGTCCAGCAGTGACTTCGAGGCCCAGATGAGCCAGAGTTCCAGGAAGAGGGCGGCGCGCTCCGCGGCAAGGAGTGGACCGGCGGCCAAGCGGCCCCAGCGCAGCACAGCCCAGGGCAGCAGGGCCACTCCCCCTGGGGCGGCCGCCACCAGATCCCCGGCCAACTCGATGGCGCCGGAGCCGGTCACCGCCGGGGTCCTGTACGAGGCTGTGCGCTCTGTCAAGAGCGCCATGAGGGCGGTCATCGATGATTGGCTGGACAGCTACAAGCATGAGAAGGAGGCGGGGCTACTGGAGCTCATCAACTtcgtagtgcagtgcagtgggtGCAAAGGGGTGGTGAGCAGGGAGATGTTCGCCCGCATGCAGAACGCAGAGATCATTAGCTGGTTGACGCGCGAGTTCGACGAGGACTCGGGCAGTTACCCCCTGTCCACCCCCGGGCCGCAGTGGCGGAAGTTCCGGGTTAACCTGTGTGAGTTTGTGCGGTTGCTGGTGCGCAGCTGCCAGCACAGCCTGCTGTACGACGAGTACCTGTTCAACGCGCTGATCTCGCTGCTCACCGGCCTGTCCGACTCGCAGTGGGAGACCAGTCAGCGGCAGTATGGCATTGAGCTGGGCAAGGAGCCATACCGCCAAGCGCCTGCCCGGCTGGAGGAGCTGCGCAGCTCGCACGCCGAGCTTCTGGAGCACCAGGAGGAGCTGAGTGGGATGATGACTGCCATCTTCAGGGGCATCTTTGTGCACCGATACAGCCAGCGCTTCCTCAATGATGGGTACCTCAAATACCTGGGCTGGACGCTGCATGACAAGCAAGGGCCCGTGAGGTTGAAGTGTCTGAAGGCCCTGCAGGGCgaGCGGATGCTGAGCATGGTGCAGGACAAGGAGTGTGATGTTGCCATGGAGGCTGTGCGGCTGGTGGCTCTCCTCCAACAGAACACGGAGGACATGCTGACGGACGAGGACTGTGCCCGTGTGTACCCGCTGATCTACGCCTCCCACAGGGGCCTGGCCTCAGCAGCCGGGGCCTTCCTCTACAACAGGTTGTGCATCGAGGTGGACAGAGAGGGCCGGGAGAGAGAGCTGGTCAGCCGCCGAGTGGCCATCGTCAGGGTCCTGCTGTCCTTCTACATACAGACCGAGCTCCACGAGCACGCCGCCTACCTGGTGGACAGCCTGTGGGACAGCGCCGGAGCCGAGCTGAAGGACTGGGAGATGATGAGTGAGCTGCTGCTGGAGGGACCAGGAGAGaaggACCTGGCAGACGACGAGGAAAGTGCCCTGATCGAGCTGATGGTGTGTGCGCTGAGACAGGCCGCCCAGCACCTGCCTCCTGTGGGCCGGACCAGCGGGAAGAGggtgctgAGTGCAAAGGATAAGAAGACACAGACCCACGACAAGCTGCTGCTGACCAGCCATTTCATCACAGTCCTGCCCCACCTGCTGGCCAAGTACTCGGCGGACAAGGACAAGGTGTCCAGTCTGTTGCAGGTGCCTCTGTACTTCGAGCTTCAGATCTACTGCACCGGCCGGCGGGAGAAGcacCTGGATCTGCTCCTGGCGCAGGTGGCCGGCATCGTGGAGAAGCACACGGACCCAGGCGTGCTGGAGGCGTGTGCGAGTGTGTTCGCGGCGCTGTGCAGTGAGCGCTACACCTTCGCAGGCCGCGCCGACGTGGCCCTCGGTCGGCTGATGGAGGGGCTGACTGACTGCTTCAGCCCCGCCCTGGAGGACCTGCTGCAGggcacTATGGATGATGTGGAGATGTACAATGCAGCCGCCACTCTGAAGAGGATCGCCGCCCTGTACAATGCGAAGGACCTGACGCAGTGGGACATGTTCAAGCCCTGCTACCAACTTCTGAAGAGTGGAGTGGAGAGCGGCGAGCTGGACAAGGAGATCATGGTCCCCGCGCTGCGCTGTGCCTTCCTGCACGTGCTGTGGGAGCTGACAAGGGCCGTCACTTCGGAGCCCACCCGGGCGCAGGTCAGCCAGCTGCGGCAGCATTTGAGGGCCCTGTGCACCGCGGGTCAGAGCTGCCTGTCTGCAGCCCGGGAGATCAGAGACGAGgCGTTCCTGCTGCTGTGTGACCTGCTCCTGCTCTGCAacgAAGACGAGGAGGCGCAGGTGCAGCGCATCGAGGCTCTCCATCGGCGCCGGGTGCAGCTGGCCGGGTTCTGCAAGCTGATCGTGTTCAGCGTGCTGGAGCTCAGCGCCGCCACCGACGTCTTCAAGCACTACCACAAGTTCTATAACGACTATGGCGACATCATCAGAGAGACGCTCAGCAAGGCCAGGGCCATCAGCCGGGTGCAGAGCGCCAGGACCGTGTGTCTGAGCCTGCAGCAGgtgttctcagagctgctgcaggagcaGGGCTCCCCTCTGGACACCTCCAGCCCGCAGTTCTGTGAGATCAGAGATCTGGCGCGCCGGCTGGCCATGACCTTCGGCATCGACCTGCACCTGGCCAGAGAGCCGCTGGTCACCCTGCACAAGGACGGGATCCGCTTTGCCCTGCGGGACCCCGGGGCCCCTGGCCAGCCACCCCCACAGCTGCCCTTCCTGGAGGTCCTGAGTGAGTTCAGCTTCAAGCTCATCAAACAGGACCGGGCCCTGCTTGCTGGGTTCCTGCAGCGTGTGGCCCCCTCGCCCCTGCCCTCCTGGACGGCCCTGGCTGTGTACCAGCGCTCCCTGCAGAGCGGCCCCAGGGACAGGGCCGCCTTGGACCGGACCTCCAGCAGCGCTGGGGCCACACACACGCCCGCCGCCAAGCGCAGGAGGGCAGCCAAGCAGgcCACCAGCTCTAGTCCTGCCGCAGGCGTGTGGCTTGAGCGCAGCAGCAACCTCTCCAACAAGCTGCCAACCCCCAGCCTCGCCTCCACCGCGCTGAGAGCGCCCAGGGGCGCCCTGCCCAGCCCCCAGCGCTCCCCTGACCCCAGCGCGGACCTGGACTCCCAGCTGTACCTGCTCAGTCTGATCGAAGAGGATGAGGACGCCGCCCCCGAGGAGGCCGAGATCGAGGACTTCGAGAGCAGCGTGGAGTCGGAGGATGGCACACCGGCTGAGCGCCTGCCCTCCACACGGCACCAGCGGCACGGGGGGCTCCTGCAGGACCTCTTCGACTGAGTCCCCCGGACCCCAGGAACCCGAGGAAGGGCGATGACAGCCAGAGACCTGTTCGGCCGCTGGGGACCAGAGCGTGGCCCTGAACCGGGGACGCCCCTCCACTGCGCAGCTCGGTCGAGTCCCAGCCTGTGTCTACTGGGGTACAAACTGCTCCTTAACGTTATAATGGACATGGCCGTCTGTGTGGATGTGTTGACAGACTGGTTGTGGGCTGGAGTGGCCACTGTTGGCCCCTGTGGTTATTATAGGAGTGTGAGAGCGAGAGTGTTACATGTCACGTGTTCTAGATGTTCATTTCATACTGCTGATACTATAACGGCAAAGTTGTTTTCAGGATTCTTGTGATTTGAGTTTGTTATCCTTGTTTGTTCCGACattcaatgtaaaatgtttgagagagagagcagttgtGTTGGCttagtttttatataaatatctaaTCCAGTGGTAAAagtttgtttattggttttgtcagattgtttttgttgattcTGATGTTGTGAACATCAATTAAATGCTTATTTTGAAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011762 True 4038 mRNA 0.62 33 3855409 3869281

Neighbor

gene id symbol gene type direction distance location
AMCG00011759 NA coding upstream 187860 3661364 ~ 3667549 (+)
AMCG00011755 NA coding upstream 363854 3484762 ~ 3491555 (+)
AMCG00011754 NA coding upstream 406575 3448466 ~ 3448834 (+)
AMCG00011750 NA coding upstream 407562 3440089 ~ 3447847 (+)
AMCG00011749 NA coding upstream 443265 3409473 ~ 3412144 (+)
AMCG00011761 mcm7,LOC107716516,LOC107744067 coding downstream 13344 3882625 ~ 3889058 (+)
AMCG00011769 NA coding downstream 42619 3911900 ~ 3914902 (+)
AMCG00011774 NA coding downstream 50388 3919669 ~ 3922626 (+)
AMCG00011776 NA coding downstream 78121 3947402 ~ 3965183 (+)
AMCG00011777 NA coding downstream 101039 3970320 ~ 3975139 (+)
G132518 NA non-coding upstream 13935 3841232 ~ 3841474 (+)
G132510 NA non-coding upstream 33096 3800311 ~ 3822313 (+)
G132508 NA non-coding upstream 62908 3792229 ~ 3792501 (+)
G132506 NA non-coding upstream 66969 3788227 ~ 3788440 (+)
G132480 NA non-coding upstream 70213 3753947 ~ 3785196 (+)
G132573 NA non-coding downstream 121146 3990427 ~ 3995729 (+)
G132574 NA non-coding downstream 122983 3992264 ~ 3992904 (+)
G132586 NA non-coding downstream 146846 4016127 ~ 4017756 (+)
G132596 NA non-coding downstream 240232 4109513 ~ 4111930 (+)
G132655 NA non-coding downstream 349266 4218547 ~ 4218983 (+)
G132271 NA other upstream 650812 3201374 ~ 3204597 (+)
AMCG00011735 NA other upstream 754272 3078417 ~ 3101137 (+)
G132221 NA other upstream 850747 3001432 ~ 3004662 (+)
G132072 NA other upstream 914238 2938370 ~ 2941171 (+)
G132058 NA other upstream 975149 2877274 ~ 2880260 (+)
AMCG00011770 NA other downstream 23100 3892381 ~ 3897596 (+)
AMCG00011771 NA other downstream 34394 3903675 ~ 3977662 (+)
AMCG00011806 NA other downstream 1245809 5115090 ~ 5120098 (+)
AMCG00011830 vmhcl,LOC107560354 other downstream 1890577 5759858 ~ 5761248 (+)
G133059 NA other downstream 1959520 5828801 ~ 5829532 (+)

Expression


Co-expression Network