AMCG00011769


Basic Information

Item Value
gene id AMCG00011769
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 3911900 ~ 3914902 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011769
ATGGCGGCGGAGGGCAGCTGCTCGCTGGACTATTTCCCGGAGAATATCTTAATGGATATTTTGTCGTACCTCACGGTGCGGGAGCTGGTCAGAGCCGGCAGGGTTTGCAAGAGATGGAAGAGACTGGTGCAGGACCACAGACTCTGGAGACACGTTGACCTGACAGAGTGGAAAGCACTGACCTCCAGGGTGCTGTGGGTGCTGTTGCGGCGGTACCTGGGAGGGGGCCTGCGGGAGCTGAGGCTGCAAGGTCTGCTGTTGTCGGTGCGGCCTGGTGCCCTGCTCTCCCGGGCCTGGCTGGGGGCCCTGGCCAAGCGCTGCCCCCAACTCAGCCGCCTCTCCCTGCGCCACGTTGACCTGAGGGAGGTGGGTGGCTGCCAGTTCCTTCCCTGCTCCCTGAGGACCCTGGAGCTGATGGCCTGCGAGATCCCCAGGGCCTTTTTCCACAGCGTTGGTGGTAGCAGTGGGATCCAGCTGGAGACCCTCATAGTGGACAGCGTGCCCTCCTTCTGCGACGAGCACCTGAGAGCGCTGGGCTCCTTGGAGGGGCTCATGGCGCTGGAGGTGAGGGAGTCCATCAGGGTGACGGAGGCCGGGCTGCGGGCGGCCGGGCTGGGGCGGCTGGTGAGGCTGGAGCTGGTGGCCACGGGGAGGGTCCAGGGAGGCACTGCCGGGGGACTGGCGGAGGGCCTGCCCGGGCTGAGGGAGCTGACCCTGGGCGGGGCGGAGGTGGAGCCCGGTCTCCCCTGTGTCCCCCGGCTGGTCGGGCTTCGCTGCCTGCGGCTGCGGGACTGCGCTCTCTCCCCCGGCCTCCTCCTGCCCCCCTGCCAGGCGGTGCCCTCCCTGCGCAGCCTGCAGCTCAGCCACATCACCCTCCCCAGGGGCACCGAAGACCAGGACGCCATCCGGCAGGGGCTCCCCATAGGAAAATCtgatgccatttaa

Function

GO: NA

KEGG:

id description
K10278 FBXL12; F-box and leucine-rich repeat protein 12

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011769 True 945 mRNA 0.68 4 3911900 3914902

Neighbor

gene id symbol gene type direction distance location
AMCG00011761 mcm7,LOC107716516,LOC107744067 coding upstream 22842 3882625 ~ 3889058 (+)
AMCG00011762 NA coding upstream 42619 3855409 ~ 3869281 (+)
AMCG00011759 NA coding upstream 244351 3661364 ~ 3667549 (+)
AMCG00011755 NA coding upstream 420345 3484762 ~ 3491555 (+)
AMCG00011754 NA coding upstream 463066 3448466 ~ 3448834 (+)
AMCG00011774 NA coding downstream 4767 3919669 ~ 3922626 (+)
AMCG00011776 NA coding downstream 32500 3947402 ~ 3965183 (+)
AMCG00011777 NA coding downstream 55418 3970320 ~ 3975139 (+)
AMCG00011782 NA coding downstream 249931 4164833 ~ 4172677 (+)
AMCG00011781 NA coding downstream 260533 4175435 ~ 4181132 (+)
G132518 NA non-coding upstream 70426 3841232 ~ 3841474 (+)
G132510 NA non-coding upstream 89587 3800311 ~ 3822313 (+)
G132508 NA non-coding upstream 119399 3792229 ~ 3792501 (+)
G132506 NA non-coding upstream 123460 3788227 ~ 3788440 (+)
G132480 NA non-coding upstream 126704 3753947 ~ 3785196 (+)
G132573 NA non-coding downstream 75525 3990427 ~ 3995729 (+)
G132574 NA non-coding downstream 77362 3992264 ~ 3992904 (+)
G132586 NA non-coding downstream 101225 4016127 ~ 4017756 (+)
G132596 NA non-coding downstream 194611 4109513 ~ 4111930 (+)
G132655 NA non-coding downstream 303645 4218547 ~ 4218983 (+)
AMCG00011770 NA other upstream 14304 3892381 ~ 3897596 (+)
G132271 NA other upstream 707303 3201374 ~ 3204597 (+)
AMCG00011735 NA other upstream 810763 3078417 ~ 3101137 (+)
G132221 NA other upstream 907238 3001432 ~ 3004662 (+)
G132072 NA other upstream 970729 2938370 ~ 2941171 (+)
AMCG00011806 NA other downstream 1200188 5115090 ~ 5120098 (+)
AMCG00011830 vmhcl,LOC107560354 other downstream 1844956 5759858 ~ 5761248 (+)
G133059 NA other downstream 1913899 5828801 ~ 5829532 (+)
AMCG00011837 NA other downstream 1972015 5886917 ~ 5888884 (+)
AMCG00011853 zfhx2,LOC108245441 other downstream 1978622 5893524 ~ 5907174 (+)

Expression


Co-expression Network