AMCG00011776


Basic Information

Item Value
gene id AMCG00011776
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 3947402 ~ 3965183 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011776
GGTCAGTACATGCTGCTGGATTCCTCCTTCAGTGTCCCAGGAGCCAAGGCAGAGCTGAGGAGCCCTGTGGTGCGCTCTAAAGGCTGCCTCCAGCTCTCTTTTTACTACTACATGTATGGCACCTCCAGCACTATGGTGATCAATGCCTACGCCACCACTCCCGACGGCACCCTCGGAAGACCCTTGTTCACTCTGACAGGCAACCAGGGGCAGGGCTGGAAGAAGGCGGAGCTCCGTTACATGGGGACAAAAGACATCCAGTTTGTGATCCAGGGAGTCTATGGAGAGACGGACAAGACAGACTTAGCGGTGGACAGTGTCTGCATCACACACTGTTCAGTGCAATGTCCTCCTAACTCACACTATGAGGTGTGCGGACGCCCCTGCCTGCCCTCCTGCCAGGCCCCCTCCACCAACTGCACCGGCTCCTGCATCACCGGCTGCCACTGCGACCCTGGCTATGTGTACCACGGGCGCCACTGCGTGCCCGTCCACCAGTGCGGCTGCCTGGACCAACACCACAACTACTATGAGGGTTGCTCGGAGATGTGCCGATGCCTGGGCAACTACAGCACAGAGTGCGTCAGTAACCAGTGCACAGCCACCGAGGAGTGTCGCTATGTCAACGGGGTGCCTGGCTGCTATCCCAAAGACTCCTCCACCTGCATCGTGTCCGGTGACCCTCACTACACCACCTTTGACCGCCGCCACTATAACTTCATGGGCAACTGCAGCTACCTGCTCACGCAGCCCTGCAACAGCAGCCGGCTCCCAGCATTCTCTGTGTTCGCTGACAACGAGCACCGCTTCGGCCAGATGAGCGTCACTTACGTCAAGGCCGTCCACGTCCACCTCCCCGTGCAGAACCTCGTCATCTCGGTGCTCAAGGGAGGGACAGTGAGGgTGAACGGGTCAAAGGTGAACCTGCCCGCCAGCCCCGCCCCCGGAGTaaATGAGTATGAAGGACAGACAGACGTTGACTACCCCAAGGACAGCAcgGTCCTGACTTCCTGTGACTTCAATGATGACGCTTCCCCGTTCTGTGACTTCCGGCAGGGGGGCGGCGACCACAGTGATTGGATACGGCACCGTGGCCCCACCCCCACCGATGGGACCGGTCCCAGTGGAGACTACCCCAGCGGCGatgGCTACTACATCTACCTGGAGGCCGACAACGTGGCCAATGGCCAGGGGGCTCAGTTTCTCAGCCCGGTTCTGCTGGCACCAGGCAGCGATCTGTGCGTGCAGTTCTGGTTCTACATGTACGGGCTGGACTCCCAGAACAGCCTAGCGGTGCTGGTGCAGCGGCCAGGGGGGGAGCAGGAGCGCCTGTGGGAGGAGATGGGCGCCCAGAGCCACTCCTGGCTGGCCAGTGCAtttattttcaaaagcatctCAATATCCCTGTCACACATTCATATAGATCAGTGTTTGTGCCGCACTGTGTCTTCTGCCACTTATAGACTTCCtctcccctccatctctctctctctcagcacctACTCTGGCCAGATGTGCGGACTGTGTGGCAACTATGACAAGGACCCTGGCAACGACTTCACTCGCCCCAATGGCAGCCAGGCGGGGGGATCAGACGACTTCGGGAACAGCTGGCAGACGCCGGAAGACGAGGATGAATCGTGTCACCCTGACAACGGGACAGTCCCCCCCTGTGATAAAGACATGGAGGCCGAGGTGTCCAAACCAGAGAACTGTGgcagactgactgactcacaCGGGCCATTCAGCAGCCACTACTCCCCCTGTGGCACGGCCTGCCCTGCCAGCTGCACTGACCCCAGCGCCCCCAGCCAGTGCCCGCTGCCCTGTGtggagggctgtgtgtgtgatgccGGGCTGGTCCTCAGTGGGGACAAGTGTGTGCCCATCAGCCAGTGTGGCTGTGTGGACAAGGACAACAACTACCATCCGGTGGGAGAGAGCTGGTTCCCGGGGCCAGGCTGCTCTGAGCGCTGTCACTGCGCCGCCTCCAATAACATCAGCTGTGAGGCCTGGCACGTGCTGCACACCTTCATGGGCACCTGCACCTACACCCTGGTCACCGTCTGCAACTCCAGCCTGCTGCCCGCCTTCACCATCACCGCCAAGAACGAGGAGCGGGGCCAGCCCCAGGCCTCCTACCTGCGCTCCGTCACTGTGGCCCTGCCCGGGGCCACCGTCACCCTGGCCAAGAGCGGGAGAGTGCTGctggaCGGGCGCAGGGTGCGGACCCCTCTGTCCATCACTGGCACGGGGGCGTCTCTATCCAGCAGTGGGGTGTACAATGTGCTGAACACGGACTTTGGGCTGACGGTGTGTGGCATGTGCGGCAACTTCAACGGCAACGACAATGATGACAACCTGATGCCCAACCGGCTGCCGGCCAAGGACTCTGCACAGCTGGGCAACAGCTGGAAGGCCGAGGGTGACACGGACTTAGGCTGTGAGCCGGACGACAGGGAGGACCTGGACCCAAAGTGCACCCCGGGGGAGGAGTCCCGTTACTCCACCCTCTGTGCCGAGCTGCTGTTGGACGCCCGCTTCGGCCCCTGCCACGCCCTCCTGCCGCCCGGCCCCTTCCTGCACAGCTGCCTGTTTGACCTGTGCGAGTACCAGGGCATGCTGGGAAGGCTGGACTGTATCGCGGTGGTGGATCCCAGGCCCTATTTCCTGAACTGCGTCTATGACATGTGCCGCTACGAGGGGCTCCAGCAGTCGCTGTGTGATCAGCTGCAGGCCTACACGGACGCCTGCCAGGCTGCAGGGGCACCAGTGCACCAGTGGAGGGCACCAGACTTTTGCCcccTCACCTGCCCCCCTAACAGTCACTACAGCCTGTGTGCCAGCGTGTGCCCAGAGAGCTGTGTGGCCCCCTCTCTGCCTGGGGGATGCCAGCCGGGCTGTGTAGAGGGGTGCCAGTGTGATCGTGGCTTCGTGCAGAGTGACGAGCAGTGTGTGGCCCTGAGAGACTGCGGCTGCCTTGACCCCCAAGGCTCCTACCACCCTGTGAATGAGAGCTGGTACCTGCCAGGCTGTGgtcagcactgtgtgtgtcagggggaGGGGGTGATCCGCTGCCAGAACACCAGCTGCTTACTCACTGAGAGCTGCCAGCTGCAGGATGGAgagtatggctgccaagggctGGactCGGCCACATGTTCGGCCACAGGGGATCCTCACTACACCTCCTACGATGGCAGAGTGCACCACTTCCAGGGCGCCTGCACCTACACCCTCTCCAAGGCCTGCAATGTCTCCTCCGGCTTGCCGTACTTCTCTGTGGAGACAGAGAACGAGCACCGCGGCAACAGCAAGACAGTGTCGTACGTCAGGGCGGTCCGGGTTAACGTTTACCAGCGAGCCATCATCCTGGGCAAAGGACGTCAagtgcagGTGGACGGGAGGCGGGTCACCCTCCCGGTGTTTCCGGCGCAGGGGCTGACCGTGCGTCTGAGCGGGGTCTTCGCGGCCGTGGAGACGGATTTCGGGCTCCACGTGCGTTTTGACGGCAACCACCATGCTGATGTCAGGGTGCCGTCCTCCTACAGTGGCCGGCTCTGCGGATTGTGCGGTGAGGCCCCGTCCGACGGGAGCACGAATTCGGGTTGCAACTATAACAGCCAGCCTGGCGACGACAACCTGAAACCCGACGGGAAACCAGCGGTTAGCACCCCCGAGCTGGGCGAGAGCTGGCAGGTCCCGGACAACCGCACAGAatgctcCCATGATGGAGGGGTGGACTCATGCGACAAGACAGTGGAGAGTGATGCCCAGAAGCCCACCAGCTGTGGCATGATCACAGACCCCCAGGGTGTGTTCCAGCCCTGCCACTCGGTGGTGCCCCCCAGTGTCTACTTTGAGAACTGCGTGCTGGGGTGCCCATAG

Function

GO: NA

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko04975 Fat digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011776 True 3888 mRNA 0.62 27 3947402 3965183

Neighbor

gene id symbol gene type direction distance location
AMCG00011774 NA coding upstream 24776 3919669 ~ 3922626 (+)
AMCG00011769 NA coding upstream 32500 3911900 ~ 3914902 (+)
AMCG00011761 mcm7,LOC107716516,LOC107744067 coding upstream 58344 3882625 ~ 3889058 (+)
AMCG00011762 NA coding upstream 78121 3855409 ~ 3869281 (+)
AMCG00011759 NA coding upstream 279853 3661364 ~ 3667549 (+)
AMCG00011777 NA coding downstream 5137 3970320 ~ 3975139 (+)
AMCG00011782 NA coding downstream 199650 4164833 ~ 4172677 (+)
AMCG00011781 NA coding downstream 210252 4175435 ~ 4181132 (+)
AMCG00011785 NA coding downstream 277989 4243172 ~ 4249417 (+)
AMCG00011793 LOC105024602,LOC106563375,LOC105902387,LOC107564776 coding downstream 628777 4593960 ~ 4601353 (+)
G132518 NA non-coding upstream 105928 3841232 ~ 3841474 (+)
G132510 NA non-coding upstream 125089 3800311 ~ 3822313 (+)
G132508 NA non-coding upstream 154901 3792229 ~ 3792501 (+)
G132506 NA non-coding upstream 158962 3788227 ~ 3788440 (+)
G132480 NA non-coding upstream 162206 3753947 ~ 3785196 (+)
G132573 NA non-coding downstream 25244 3990427 ~ 3995729 (+)
G132574 NA non-coding downstream 27081 3992264 ~ 3992904 (+)
G132586 NA non-coding downstream 50944 4016127 ~ 4017756 (+)
G132596 NA non-coding downstream 144330 4109513 ~ 4111930 (+)
G132655 NA non-coding downstream 253364 4218547 ~ 4218983 (+)
AMCG00011770 NA other upstream 49806 3892381 ~ 3897596 (+)
G132271 NA other upstream 742805 3201374 ~ 3204597 (+)
AMCG00011735 NA other upstream 846265 3078417 ~ 3101137 (+)
G132221 NA other upstream 942740 3001432 ~ 3004662 (+)
G132072 NA other upstream 1006231 2938370 ~ 2941171 (+)
AMCG00011806 NA other downstream 1149907 5115090 ~ 5120098 (+)
AMCG00011830 vmhcl,LOC107560354 other downstream 1794675 5759858 ~ 5761248 (+)
G133059 NA other downstream 1863618 5828801 ~ 5829532 (+)
AMCG00011837 NA other downstream 1921734 5886917 ~ 5888884 (+)
AMCG00011853 zfhx2,LOC108245441 other downstream 1928341 5893524 ~ 5907174 (+)

Expression


Co-expression Network