AMCG00011777


Basic Information

Item Value
gene id AMCG00011777
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 3970320 ~ 3975139 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011777
ATGGTACTCTCCAGTGTCATCCACGCAGCCGCAGCTGGACTGGGGGACGCACTGTCCGTCACTGAGCACGAAGCCCCTGTCACAGCGGCAGCCCTCCACGCAGGCGCTGGGCGGCTGGGCACAGCTGGACTCAGCAAACAGGTTGGCACAGGTGGAAGGGCAAGGCGGGGTGCAGGGGGAGTAGTGGCTGTTGGGAGGGCAGGGCAGAGCTgcgggCAGTGTCTGTGCACAGCGACGGGCTTTGTGTGCCATGCAAACAGCTGCCCAGAGGGACACGTGTGTTCTGTGTTCAACTACACGCGTGACTGCTACAAAGCCAGCGCATGTCTGAGCTACCCCTGTCTGAACGGCGGGTCGTGCCAGGAGACAGCAGGGGGCTCCAACTTCACCTGCAACTGCGCCGAGGGGTACGAGGGGGCGCTGTGCGAGGTGGAGAAGACCACCCAAGAGGACGACCGGCTGGatgaGACGACCATCATCCTGATCGGAGTGCTGGTGCCGCTGGCCGTGATCGTGCTGGCGGtgACTGCAGTTCTATCTTGTGTCTTCTTTGGACTTGTTTACGTCACTGACGCATTTCAGTGCCACGCCCCCAAATCATGCAACATCCCATCAGCAATACAACTGTCAGTTAATGACTCTATAAAATCGGGCAGCACCTTATAA

Function

GO: NA

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011777 True 666 mRNA 0.60 5 3970320 3975139

Neighbor

gene id symbol gene type direction distance location
AMCG00011776 NA coding upstream 5137 3947402 ~ 3965183 (+)
AMCG00011774 NA coding upstream 47694 3919669 ~ 3922626 (+)
AMCG00011769 NA coding upstream 55418 3911900 ~ 3914902 (+)
AMCG00011761 mcm7,LOC107716516,LOC107744067 coding upstream 81262 3882625 ~ 3889058 (+)
AMCG00011762 NA coding upstream 101039 3855409 ~ 3869281 (+)
AMCG00011782 NA coding downstream 189694 4164833 ~ 4172677 (+)
AMCG00011781 NA coding downstream 200296 4175435 ~ 4181132 (+)
AMCG00011785 NA coding downstream 268033 4243172 ~ 4249417 (+)
AMCG00011793 LOC105024602,LOC106563375,LOC105902387,LOC107564776 coding downstream 618821 4593960 ~ 4601353 (+)
AMCG00011794 NA coding downstream 671171 4646310 ~ 4648415 (+)
G132518 NA non-coding upstream 128846 3841232 ~ 3841474 (+)
G132510 NA non-coding upstream 148007 3800311 ~ 3822313 (+)
G132508 NA non-coding upstream 177819 3792229 ~ 3792501 (+)
G132506 NA non-coding upstream 181880 3788227 ~ 3788440 (+)
G132480 NA non-coding upstream 185124 3753947 ~ 3785196 (+)
G132573 NA non-coding downstream 15288 3990427 ~ 3995729 (+)
G132574 NA non-coding downstream 17125 3992264 ~ 3992904 (+)
G132586 NA non-coding downstream 40988 4016127 ~ 4017756 (+)
G132596 NA non-coding downstream 134374 4109513 ~ 4111930 (+)
G132655 NA non-coding downstream 243408 4218547 ~ 4218983 (+)
AMCG00011770 NA other upstream 72724 3892381 ~ 3897596 (+)
G132271 NA other upstream 765723 3201374 ~ 3204597 (+)
AMCG00011735 NA other upstream 869183 3078417 ~ 3101137 (+)
G132221 NA other upstream 965658 3001432 ~ 3004662 (+)
G132072 NA other upstream 1029149 2938370 ~ 2941171 (+)
AMCG00011806 NA other downstream 1139951 5115090 ~ 5120098 (+)
AMCG00011830 vmhcl,LOC107560354 other downstream 1784719 5759858 ~ 5761248 (+)
G133059 NA other downstream 1853662 5828801 ~ 5829532 (+)
AMCG00011837 NA other downstream 1911778 5886917 ~ 5888884 (+)
AMCG00011853 zfhx2,LOC108245441 other downstream 1918385 5893524 ~ 5907174 (+)

Expression


Co-expression Network