AMCG00011782


Basic Information

Item Value
gene id AMCG00011782
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 4164833 ~ 4172677 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011782
ATGTGTACTGAATTGGAGTGCGGGATTTGCTACAGGACGTACAACACCGGGCACCGCTGCCCCAGAGAGCTGAGCTGCGGCCACACGTTTTGCCAGAGATGCCTGGTGACCTTAGCCCGGACCTGCGCCAGCCCCGCAGGTGAGGACGAGAGGCTGCGGGGCTCGGAGGGCGAGGCGGCGGACATCGTCTGCCCGCTGTGCCGCTGCTCCACCTCGGTGTCCGCGTCCACGGAGGTCCGGCGGTGTCTCCCCGTGGACGAGGCGGTGGTGGAGCGCATGCAGGCTGCCGGGTTGCTGGACGGGTCCGCCGGGGACAGCGAGGAAGAGGACGAGGAGAGTGAGGGCAAGTGCGATGGTCCATCGGACGGGTCCTCCTGTGTCCCAGCccgagaggaggaggaggaggaggaggaggaggctgcGGGGTCTCGGAAAGGCAAACTCTGGAGAGCTATCAAGCGCTTTTGGAAGAAGTGTGGCGGAGGCAGCAGTAACGCACGCCGGAGCAGTGTCATCCAGTGCAACTCTGAGGATCTGAGGGACATTGCGCTCATGACGTGTTACATGATAGCTTCTACTGAGCCCTTGCCACCGACGGGGCAGCAGCTGAGGAAGAGAAGGCCCCCATGGAAGGAGTGCAGGACCACTGGGTCTGCTGCCACTGTTGAGAATGGTGCCCTATCACCAGGCTCTGCCAAGCTCCAGAACTACAACCCAGTGAAGGCACACCTACGGGAAGCCAACATGACAGCGGGTAAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011782 True 762 mRNA 0.63 3 4164833 4172677

Neighbor

gene id symbol gene type direction distance location
AMCG00011777 NA coding upstream 189694 3970320 ~ 3975139 (+)
AMCG00011776 NA coding upstream 199650 3947402 ~ 3965183 (+)
AMCG00011774 NA coding upstream 242207 3919669 ~ 3922626 (+)
AMCG00011769 NA coding upstream 249931 3911900 ~ 3914902 (+)
AMCG00011761 mcm7,LOC107716516,LOC107744067 coding upstream 275775 3882625 ~ 3889058 (+)
AMCG00011781 NA coding downstream 2758 4175435 ~ 4181132 (+)
AMCG00011785 NA coding downstream 70495 4243172 ~ 4249417 (+)
AMCG00011793 LOC105024602,LOC106563375,LOC105902387,LOC107564776 coding downstream 421283 4593960 ~ 4601353 (+)
AMCG00011794 NA coding downstream 473633 4646310 ~ 4648415 (+)
AMCG00011796 nlgn2,LOC107750775,LOC107564776,LOC107664280,LOC107659731 coding downstream 510999 4683676 ~ 4697341 (+)
G132596 NA non-coding upstream 52903 4109513 ~ 4111930 (+)
G132586 NA non-coding upstream 147077 4016127 ~ 4017756 (+)
G132573 NA non-coding upstream 169104 3990427 ~ 3995729 (+)
G132574 NA non-coding upstream 171929 3992264 ~ 3992904 (+)
G132518 NA non-coding upstream 323359 3841232 ~ 3841474 (+)
G132655 NA non-coding downstream 45870 4218547 ~ 4218983 (+)
G132660 LOC105020582,LOC108229068,LOC104920020,LOC106608724 non-coding downstream 86867 4259544 ~ 4322290 (+)
G132722 NA non-coding downstream 580045 4752722 ~ 4752923 (+)
G132726 NA non-coding downstream 591012 4763689 ~ 4763888 (+)
G132734 NA non-coding downstream 602477 4775154 ~ 4775539 (+)
AMCG00011771 NA other upstream 187171 3903675 ~ 3977662 (+)
AMCG00011770 NA other upstream 267237 3892381 ~ 3897596 (+)
G132271 NA other upstream 960236 3201374 ~ 3204597 (+)
AMCG00011735 NA other upstream 1063696 3078417 ~ 3101137 (+)
G132221 NA other upstream 1160171 3001432 ~ 3004662 (+)
AMCG00011806 NA other downstream 942413 5115090 ~ 5120098 (+)
AMCG00011830 vmhcl,LOC107560354 other downstream 1587181 5759858 ~ 5761248 (+)
G133059 NA other downstream 1656124 5828801 ~ 5829532 (+)
AMCG00011837 NA other downstream 1714240 5886917 ~ 5888884 (+)
AMCG00011853 zfhx2,LOC108245441 other downstream 1720847 5893524 ~ 5907174 (+)

Expression


Co-expression Network