AMCG00011785


Basic Information

Item Value
gene id AMCG00011785
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 4243172 ~ 4249417 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011785
GCGGGGGAATCCCCGTCCTGCGCGCGCCTATGAGAAGAGCCCAGGCCGGGGGGGACGCGGGGGTGTCGTTAAAACAGACGGGTGCTGGAAACATTGTAGACACATTGCACTGCGTTCAACAGAGAGCAGCGCACACAGGGCTACAGTCCGCGGCCCGGTTGTAACCATCTGTATGATCTACTGCTGCGGGAAGGAAGAGCAGGAGCAGCCCGGCGAGCCGCGCCTTTGGATGAAGAGAGAGGCCGGGGCAGGACGGGACAAACGACAGGCCCCCACTGCGCCAGCGACGCGGGAGATGTACGACCTAGCGGCGGTCCCGGAGCAGCCCCAAGCCGGCCGCTTTCCGCCGGAGGAGGGCCGCTATAACCCGGGGCAGGCGGCGGAGTTCAACCCCGGCCGGCTGAGCCTCGACTCCCCGCAGCGCCGGCTGGGCAGGCGGGCCCCCAAGCTGGGCGAGATCGGCCGGTCCCGGAGAGTTGTGATCGAGGATGAAGATTTTGATGACATGATGAACAATAATGGCCTTTTCCCCATATCCCTTAACCTGACGCCTGTGGCCTAGATACCCTGCGATACCGACTGTGCCATGCCTACACGAAGCCAAACCGCAAAACCGTGGGTCGAAATGCCTTTTTACCGGGGAAATGAATTGGAGACGTCAAAATCTTCATGGggactttatttattgtttaacttCAAGCACTTTAAGCTTATTTATGGAACACTGATACAATTGGTGTGCTTTTCTGTGGTTTCTCTTTCATTTCGGTTtcttaaagtgttttaaaaaataataataataaaaaaaaaacttaaaaaggtGTTCTAATTTTCTCTTCGATTTGGTCATGTTCATAATAGGCTGACCACTATGCTAAGTTTATAGTAGTTTATGTATAAGAAAACTATAGTAGATCTTAATTTTTCGGgatgttaatttgaaaaaatgttgtatgcTTTTTAAAAGGTTCTTTAGCGAATGTAAAATGAGTTGTAAACTTACTATGGTGCGACATCCTTCGGAATATGACCATTTCTGTAATAGGGGGTGTAAAGCCTGCAGCCAGACTCATTTAGTTTCTAATCTAATATCCCTCCGTAACTGCATACGTATATGGAATTATATTGAAACCATACAAAAGGGCCACACAGGAAATGAGCATGAGTTTTCACATGTGGCAagaaatatatctttatatctTTACGTGGAACATCTGTTATATGCATTGTCACGCTGACACTCTCTCTTTGCAAGCATGCACCTAGAAACTATATACCTTGTGTTTCTATACAGCATTGTGTGACATAGCATTCCATTTGTACgttgaaattgaaaatactaAAGCTAACGTAGTCTGGCTGCAAGCATTTCACCAGCAtctccttatttaaaaaaaatataataataataataataacaataattagagATTCCTCAAATATGGAGATTTATCAGAGTAAACTGTAGAAACTGGAACTGTTAGGGAGAGAGTGGTAGGACATATTTAGTATTTAGAAAATAAGATGTCCTAATTGAAAACCGACtttccttttatatatttttgtttcatgtctTAAAAGTTGGTCTGGAATCTATATATTGGCCAAAATGCAGCTTCTCGtacagcaaaaaagaaaaacgaaaaaaaaaaagtgcaatactATTTCTTCATATGTTTACAGCTTATCTTTTAAGAagggatgttttgttttagagaTGACCGTCTTCACTGGAAAGAGAAGTATAATTGCTTCTCATTAGCTATTCTTGTTTGGAAACTGTTATACTGGATATTTAAGCAGACTGGGAATTAATCccactgttttaaatgttacggttattaatttattaaaaaaaaaagacaaaagctgTAGAAAGCCCTGTACCTTGTATTTCAAATTGGATATCCGCATGTTGGCGATTGATTGGCACATGATTTCTATTTTGCGACTGTACCTAGGTGTTTGTACAGTGCATGGTGTTGGTAAAGGTTGCATGAGTTATGTTGTGATCTACCATATCAAGATATGCTTTGTATCATGAGAGCACCGAAACATCCATTCATTACTTTGTGTCTGTCAATTGCCATTTTTTAGGCAGCCTACAGCTTGTTTAATTTTAGGTTTAAattgtggttatattttaatttaaaaatcggCATCATGTTGTGATGAAATCCAGGACTCTGGATGAAATATACATTCAATTGTGAAATCCAAGGGTACAGAAAACTCAACAATTcgagaagagaaaaaataaaaactaaaataaacatgcattgcCTTTGCCTGCCTTATTGATTGTCTCTCCGATTGTACGCTTTGAACAAAGGTATCCATTCAACCTAAACGTCTGTACTAGGAAGCGACATTGGAATATTTTATTCCACTCCCTGTGTTCCAGTTGATGTTTCTAAATGAAGGCATTTACATTGTCAAGAACGAGAAGGATGAAAATGTTGCTTGCTGATTTTCAAAGTAAACTTTACAGTTAGAATGATGTAAAGTATTCCTGgttaaagtgaaataatacGTTTGGTCATTTATGCTTCAGGGTTTGTATAGCAAGGTTATTTAAGTATGTAGGCATTTCATATCAGACATACAATGCTAATACTGTCTTTGCATATAATCACAGTATTTCAACACAATCTTAATGTTGCACTgtgtaaaatactatattttCCAAACTTCAATACTGCTATTTTTACCTTTCGTGTTATGACACATATGACACAATCTTCACAATATCCTGGCTGCCAACCCCACCAGGACACAAGTGTTAAGTGTCTTCAGTTTTTTGCTATTTAAGGAATGCATGTGATTGATCTATCTATGACAGTATTGATTGCTCATAGGAGGATGGATTTTCctattaaaaatatgcatttacattttaaacctgtgTGTTGTGAGGTTATTTGTACCATTAGTGCTTTAACAGTATTGGGCTTGTTGAAGCTTtgccattttttaattatcattattatgctttgaattgcactgcattatgtaaattggaatttgtaatatgttttatgcattgaactgcactgtatttttgcatgttgtattgtgcttatattttggataagggtgtctgctcataaataaataataatccaatagtaaacaaaacaacaaagtgcaTTACAGGTTTCTGTCACATGAGGGCAGAACTGACTGTAAAACAATCTACTCCACTTCCTACAACCACCAGGACGTTGGATACAGTCATTAACTCCTTTTGGCACACAAAGAATACTAAATGCATTATCTGCTTTTTAGTATAACGTGGGACAGTACAGATTTTCATctgcactaaaaaaaaaaaaaaagtttgttttcttgaataaaatatttatttttacattaataaaacatgacttGGTAAAAGTCCCCCAAATTGAGAAACCCCAGGACGTTGAGGCATCCTTCTGTTTGCTAATGGAGCAGGGGAGTGTGTTTCCTTACACACAAGATAGGATGTAATACAGACaagcgtgtttgtgtgtgtgtgaaaggaatcattgttcaaattaaaatgaaagtgctgAAAACTAACAACCGgtatgtttaaatatgcagA

Function

GO:

id name namespace
GO:0007005 mitochondrion organization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011785 True 3589 mRNA 0.39 3 4243172 4249417

Neighbor

gene id symbol gene type direction distance location
AMCG00011781 NA coding upstream 62040 4175435 ~ 4181132 (+)
AMCG00011782 NA coding upstream 70495 4164833 ~ 4172677 (+)
AMCG00011777 NA coding upstream 268033 3970320 ~ 3975139 (+)
AMCG00011776 NA coding upstream 277989 3947402 ~ 3965183 (+)
AMCG00011774 NA coding upstream 320546 3919669 ~ 3922626 (+)
AMCG00011793 LOC105024602,LOC106563375,LOC105902387,LOC107564776 coding downstream 344543 4593960 ~ 4601353 (+)
AMCG00011794 NA coding downstream 396893 4646310 ~ 4648415 (+)
AMCG00011796 nlgn2,LOC107750775,LOC107564776,LOC107664280,LOC107659731 coding downstream 434259 4683676 ~ 4697341 (+)
AMCG00011795 NA coding downstream 470397 4719814 ~ 4721921 (+)
AMCG00011801 NA coding downstream 538898 4788315 ~ 4804985 (+)
G132655 NA non-coding upstream 24189 4218547 ~ 4218983 (+)
G132596 NA non-coding upstream 131242 4109513 ~ 4111930 (+)
G132586 NA non-coding upstream 225416 4016127 ~ 4017756 (+)
G132573 NA non-coding upstream 247443 3990427 ~ 3995729 (+)
G132574 NA non-coding upstream 250268 3992264 ~ 3992904 (+)
G132660 LOC105020582,LOC108229068,LOC104920020,LOC106608724 non-coding downstream 10127 4259544 ~ 4322290 (+)
G132722 NA non-coding downstream 503305 4752722 ~ 4752923 (+)
G132726 NA non-coding downstream 514272 4763689 ~ 4763888 (+)
G132734 NA non-coding downstream 525737 4775154 ~ 4775539 (+)
G132755 NA non-coding downstream 598115 4847532 ~ 4847740 (+)
AMCG00011771 NA other upstream 265510 3903675 ~ 3977662 (+)
AMCG00011770 NA other upstream 345576 3892381 ~ 3897596 (+)
G132271 NA other upstream 1038575 3201374 ~ 3204597 (+)
AMCG00011735 NA other upstream 1142035 3078417 ~ 3101137 (+)
G132221 NA other upstream 1238510 3001432 ~ 3004662 (+)
AMCG00011806 NA other downstream 865673 5115090 ~ 5120098 (+)
AMCG00011830 vmhcl,LOC107560354 other downstream 1510441 5759858 ~ 5761248 (+)
G133059 NA other downstream 1579384 5828801 ~ 5829532 (+)
AMCG00011837 NA other downstream 1637500 5886917 ~ 5888884 (+)
AMCG00011853 zfhx2,LOC108245441 other downstream 1644107 5893524 ~ 5907174 (+)

Expression


Co-expression Network