AMCG00011809


Basic Information

Item Value
gene id AMCG00011809
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 5127605 ~ 5133544 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011809
gacattcagtttggagttcaggagattgtcttgaccaggaccacacccctaaatgcattgaagaaactgccatgtgattggttggttagataattgcattaatgagaaattgaacaggtgttcctaatgatcctttagGTAAAAGACAAGAATGGCTACAAAAATAGTAATTCAACAGCCCCAGCCACTCATGTATGAAATGGAATCCACGGAGTGGAGCACGGGCATCTGCGACTGCTGTGAAGACATTGAATCCTGCTGTTTAGCATTCTGGTGTGGTCCCTGTTTTGCCTGCAAGACTGTCCACGAATATGGGGAATGCCTTTGTCTCCCCCTTCTGGACATGTTTGGTTTTATACCACCCATCGCTCTGACTATGAGGGTAGTCACCCGACAGCGCTATGGGATCAAGGACACTATCTGTCATGACTGTCTATACGCCTGTTGTTGCTACGCTTGCTCTTGGTGCCAGGTTTCCAGAGAGATAAAGATGCGTGCCAAGCCAGTAGTTTTGACCCACGCGCTGCCCAATGTCAATGCCGGAAACTACAATGCTTGAAACTACAAACTTAGAAAGCATTCATCAGGACCAACTGAAGGCCTTGCTTAAACCCTCAAGGTCATTTGCAACTTCTGTGTCCTCAGACATTaatatttcttgttgttttaattatatctaATATGTCATTGCAGTAGTTTACAACCCCCGATTGTCAATTAGTGCGAGTAGTTCATTATATTGAGGATTGACAGGGTCAGACCTTTTGaccactcccccccacccccagaccCTTTTTTCAGTAAGGTGAAGGATCCAAGCAGAGGTGGTAACTGGGGAGGAGGTGGGATGTGAAGCAACGAACGCAGGGGTAGGGGGGGGTATTGAGCACCAGGTGTTTAGGTATTAAACTGTATTGGAAGGAAGTGACTGGCCAGTATTGTGTTTGTCTAATTCATTATAAActccaaaaatatattctggTACCATGGAACTATTTCTTTGctgttacatttgttatttacacccatttttaatAAATCGTGGATGAAAGATTAATGTTCAACTAATGAATCTGGTTACATTCgctgtatatattaattgtaatagACGATGATTTACATTCTCTGATCTGTAATTAGTTTTCTCTTTGTGTCAGTTTAGCAGTCATTTGTTGAAACAATACTTTCCAACGAATGATAAATAGAAGCACCAGAAAAGTTACGATTGATTGAAATCTGTACATATAATCTGTGTATTTTGTGCACTGGTGTATTTCattcataataaacaatacataaacaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011809 True 1303 mRNA 0.41 4 5127605 5133544

Neighbor

gene id symbol gene type direction distance location
AMCG00011802 NA coding downstream 319916 4805890 ~ 4807689 (-)
AMCG00011797 NA coding downstream 347115 4778329 ~ 4780490 (-)
AMCG00011798 NA coding downstream 357801 4766530 ~ 4769804 (-)
AMCG00011800 NA coding downstream 382069 4745240 ~ 4745536 (-)
AMCG00011799 NA coding downstream 396144 4721755 ~ 4731461 (-)
AMCG00011810 NA coding upstream 32624 5166168 ~ 5219056 (-)
AMCG00011818 NA coding upstream 227793 5361337 ~ 5399035 (-)
AMCG00011822 NA coding upstream 269101 5402645 ~ 5460948 (-)
AMCG00011821 NA coding upstream 394739 5528283 ~ 5529716 (-)
AMCG00011827 NA coding upstream 502577 5636121 ~ 5638116 (-)
G132833 NA non-coding downstream 57938 5040983 ~ 5069667 (-)
G132819 NA non-coding downstream 108182 5018963 ~ 5019423 (-)
G132759 NA non-coding downstream 276603 4850720 ~ 4851002 (-)
G132747 NA non-coding downstream 315747 4811547 ~ 4811858 (-)
G132717 nlgn2,LOC107386614,LOC106563375 non-coding downstream 432800 4694438 ~ 4694805 (-)
G132862 NA non-coding upstream 28641 5162185 ~ 5163811 (-)
G132977 NA non-coding upstream 497550 5631094 ~ 5631526 (-)
G133076 NA non-coding upstream 720393 5853937 ~ 5854156 (-)
G133080 NA non-coding upstream 723119 5856663 ~ 5857165 (-)
G133147 NA non-coding upstream 763195 5896739 ~ 5897003 (-)
G132788 NA other downstream 122996 5004165 ~ 5004609 (-)
G132712 LOC105024602,LOC106563375,LOC105902387,LOC107564776 other downstream 533156 4593693 ~ 4594449 (-)
AMCG00011792 NA other downstream 635048 4482151 ~ 4492557 (-)
G132693 NA other downstream 650626 4474605 ~ 4476979 (-)
G132667 NA other downstream 908622 4218549 ~ 4218983 (-)
AMCG00011811 NA other upstream 8921 5142465 ~ 5150213 (-)
AMCG00011812 NA other upstream 156630 5290174 ~ 5328724 (-)
G133026 NA other upstream 567542 5701086 ~ 5703917 (-)
G133032 smyhc1,LOC100136150,LOC103364123,LOC103375112,LOC101484004,LOC102294892,LOC102297239,LOC103482310,LOC106963427,LOC103135328 other upstream 573739 5707283 ~ 5793845 (-)
AMCG00011831 smyhc2,LOC107560354,LOC108436074,LOC108436073,LOC102297239,LOC102201055,LOC101483728,LOC103396567 other upstream 573849 5707393 ~ 5720981 (-)

Expression


Co-expression Network