AMCG00011818


Basic Information

Item Value
gene id AMCG00011818
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 5361337 ~ 5399035 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011818
ATGTTCACCAGAGGAAGACAGGATAGCAGTGCGGAGCTTACCAGTGCAAACCACGGAGTGCTTCACGGCCACAGCTACTTATCTATGGATTGTGGCAATAAACGGATCTTGGAGTGCTGGCCTGCCCTGAAgtgttattttctgtcattGGGAAAGAAGGATTGTCCTGACATTATCTGGAAGGTTATGTTCAGAAGTGGTGCTGATGCTGCCGACAGCAGTGATGAAGATGATGCGACAGTGTCTGAATGTTTCCTGTTGCTCATGCACAGCGTCAAGCAGGAATTTGACAACGCAATTCAGAAGGTGGAAACGAGATTACCGACAGCTGCTGTAGCCTTTTCAAAGGGCTTGTCCAATACAAAGGGAAGGAGAGCACGACCGAAGAGAAGTGGGGAGTACAACAAGCTTTCCATGGAGTGCTCACAGAGGGTGCTGCGAGGGATCATTCCCACAGATCCAGTGATGGCATTAGATGACGGGTCCAGCAGGGGGCGACAGAGGCACTACCCACATTCACAGTTCGTCTTGCACATTAAGCAGGGCAGACACCAGAAGCCACAGCAACCTGGGGGGAGACACAGAGATCAGGCTACTAGCACAGCAATGAGAGACAGTCGCGTACCACTCCGTATTCTGCATTTCCTCCCTCCTGGTATGGTCACGGTCAATATTCTCCACAGGCCACTGGCGAGGGAAACTCGAACTAGGGCTAACTATACGGCGTCCTCGTTGTCTTCGCTGCTCCAGCCGCTGCCACCAGAAggagatggggagagtgagagagaaagcaagaatcaaaagcacagaaaacaccAGGAAGTTATTTTAAATCGGTTCGGCGAGCTGGATGAGAACTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011818 True 861 mRNA 0.51 5 5361337 5399035

Neighbor

gene id symbol gene type direction distance location
AMCG00011810 NA coding downstream 142281 5166168 ~ 5219056 (-)
AMCG00011809 NA coding downstream 227793 5127605 ~ 5133544 (-)
AMCG00011802 NA coding downstream 553648 4805890 ~ 4807689 (-)
AMCG00011797 NA coding downstream 580847 4778329 ~ 4780490 (-)
AMCG00011798 NA coding downstream 591533 4766530 ~ 4769804 (-)
AMCG00011822 NA coding upstream 3610 5402645 ~ 5460948 (-)
AMCG00011821 NA coding upstream 129248 5528283 ~ 5529716 (-)
AMCG00011827 NA coding upstream 237086 5636121 ~ 5638116 (-)
AMCG00011825 NA coding upstream 244678 5643713 ~ 5646448 (-)
AMCG00011832 NA coding upstream 259754 5658789 ~ 5680606 (-)
G132862 NA non-coding downstream 197526 5162185 ~ 5163811 (-)
G132833 NA non-coding downstream 291670 5040983 ~ 5069667 (-)
G132819 NA non-coding downstream 341914 5018963 ~ 5019423 (-)
G132759 NA non-coding downstream 510335 4850720 ~ 4851002 (-)
G132747 NA non-coding downstream 549479 4811547 ~ 4811858 (-)
G132977 NA non-coding upstream 232059 5631094 ~ 5631526 (-)
G133076 NA non-coding upstream 454902 5853937 ~ 5854156 (-)
G133080 NA non-coding upstream 457628 5856663 ~ 5857165 (-)
G133147 NA non-coding upstream 497704 5896739 ~ 5897003 (-)
G133156 NA non-coding upstream 526594 5925629 ~ 5973380 (-)
AMCG00011812 NA other downstream 32613 5290174 ~ 5328724 (-)
AMCG00011811 NA other downstream 211124 5142465 ~ 5150213 (-)
G132788 NA other downstream 356728 5004165 ~ 5004609 (-)
G132712 LOC105024602,LOC106563375,LOC105902387,LOC107564776 other downstream 766888 4593693 ~ 4594449 (-)
AMCG00011792 NA other downstream 868780 4482151 ~ 4492557 (-)
G133026 NA other upstream 302051 5701086 ~ 5703917 (-)
G133032 smyhc1,LOC100136150,LOC103364123,LOC103375112,LOC101484004,LOC102294892,LOC102297239,LOC103482310,LOC106963427,LOC103135328 other upstream 308248 5707283 ~ 5793845 (-)
AMCG00011831 smyhc2,LOC107560354,LOC108436074,LOC108436073,LOC102297239,LOC102201055,LOC101483728,LOC103396567 other upstream 308358 5707393 ~ 5720981 (-)
AMCG00011845 LOC107680223,LOC107589804,LOC107688458,LOC107722552,LOC107088600,LOC103479335,LOC102208621,LOC105941235,LOC103147024,LOC108229072,LOC106514905,LOC107384191,LOC106590239 other upstream 342178 5741213 ~ 5760549 (-)
G133075 NA other upstream 452845 5851880 ~ 5852590 (-)

Expression


Co-expression Network