AMCG00011821


Basic Information

Item Value
gene id AMCG00011821
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 5528283 ~ 5529716 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011821
ATGACTGTGAGCAGTTCAGCTCCCCTGTGGCTAGAAGACCACTCCCTGAAAAGGATCTGCCAGCGCTTCGTAGACAGACCCCACTACGCCACCCTGTACGACACGGCCAACCACATCCCGGTCTACTCAGCGTACTCCTTCAAACGATCTGACGGGGCCAAGCGTGTCGATGTGCTGTGGATGTTTGAGCCACAGCTGGCCCAGGACAAAATGCAGCCCTTTCCCCAGGGTGACTATCACCAGAACTTTGAGGACACGCAGGCCGTTCTTAGTGACTACATCTATGCGTTCTCCTTCGAAAGAGGTCAGCTGAACCTGGACCCGCACCAAGCCAACCCGAATGATAAAGCCGCCACTTACACTCTTACTAACATTGTACCGCAAGTCAGGGAGTTCAATATCGGCCCCTGGGCTCAGCACAAGAACATGATCAGAATGCGGCTCAATAACTACTGCAGGGGCACGGCTAATGTTGTAACTGGAGTGACGCCTTCAGGGAACATGATCCGAAGGAATGAAGTGGCCAGGGTGGCCATCCCAAAGTACATGTGGTCGGCCTACTGTTGCACCAACTATGACAGAAACGCCCCCAACAGCGCAAAGTGCAAGTTCCCTGCCCACGCGGCTTATGGGCTGAATGCAAGAACGGACAATGAAGTGGTGAAACTGACTGTCAAAAGCCTGGAAAACTTTCTGAAGGAGTCCATGTCAGtagataaaaacattcagatttTCTACCACAACTGCATTACGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011821 True 756 mRNA 0.52 2 5528283 5529716

Neighbor

gene id symbol gene type direction distance location
AMCG00011822 NA coding downstream 67335 5402645 ~ 5460948 (-)
AMCG00011818 NA coding downstream 129248 5361337 ~ 5399035 (-)
AMCG00011810 NA coding downstream 309227 5166168 ~ 5219056 (-)
AMCG00011809 NA coding downstream 394739 5127605 ~ 5133544 (-)
AMCG00011802 NA coding downstream 720594 4805890 ~ 4807689 (-)
AMCG00011827 NA coding upstream 106405 5636121 ~ 5638116 (-)
AMCG00011825 NA coding upstream 113997 5643713 ~ 5646448 (-)
AMCG00011832 NA coding upstream 129073 5658789 ~ 5680606 (-)
AMCG00011833 NA coding upstream 162338 5692054 ~ 5696144 (-)
AMCG00011843 LOC108436074,LOC108436073 coding upstream 205313 5735029 ~ 5740052 (-)
G132862 NA non-coding downstream 364472 5162185 ~ 5163811 (-)
G132833 NA non-coding downstream 458616 5040983 ~ 5069667 (-)
G132819 NA non-coding downstream 508860 5018963 ~ 5019423 (-)
G132759 NA non-coding downstream 677281 4850720 ~ 4851002 (-)
G132747 NA non-coding downstream 716425 4811547 ~ 4811858 (-)
G132977 NA non-coding upstream 101378 5631094 ~ 5631526 (-)
G133076 NA non-coding upstream 324221 5853937 ~ 5854156 (-)
G133080 NA non-coding upstream 326947 5856663 ~ 5857165 (-)
G133147 NA non-coding upstream 367023 5896739 ~ 5897003 (-)
G133156 NA non-coding upstream 395913 5925629 ~ 5973380 (-)
AMCG00011812 NA other downstream 199559 5290174 ~ 5328724 (-)
AMCG00011811 NA other downstream 378070 5142465 ~ 5150213 (-)
G132788 NA other downstream 523674 5004165 ~ 5004609 (-)
G132712 LOC105024602,LOC106563375,LOC105902387,LOC107564776 other downstream 933834 4593693 ~ 4594449 (-)
AMCG00011792 NA other downstream 1035726 4482151 ~ 4492557 (-)
G133026 NA other upstream 171370 5701086 ~ 5703917 (-)
G133032 smyhc1,LOC100136150,LOC103364123,LOC103375112,LOC101484004,LOC102294892,LOC102297239,LOC103482310,LOC106963427,LOC103135328 other upstream 177567 5707283 ~ 5793845 (-)
AMCG00011831 smyhc2,LOC107560354,LOC108436074,LOC108436073,LOC102297239,LOC102201055,LOC101483728,LOC103396567 other upstream 177677 5707393 ~ 5720981 (-)
AMCG00011845 LOC107680223,LOC107589804,LOC107688458,LOC107722552,LOC107088600,LOC103479335,LOC102208621,LOC105941235,LOC103147024,LOC108229072,LOC106514905,LOC107384191,LOC106590239 other upstream 211497 5741213 ~ 5760549 (-)
G133075 NA other upstream 322164 5851880 ~ 5852590 (-)

Expression


Co-expression Network