AMCG00011859


Basic Information

Item Value
gene id AMCG00011859
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 5940650 ~ 5946920 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011859
ATGTTCTACTACCCCGATGTCCTGCAGAGGCACACCGGCTGCTTCTCCATTATATGGCTGGCCGCCACTAAGGGAATCCGGATCACTCGCAGGGACTACATGAAAGTCAACGTCAAACGCACCTGTGATCACATTGTGGAGTTCGTGCTGGTGCGGGTGGAGCCCCCCCAGGCGGGCCTGCCGCGCCCCCGCTTCTCCCTGTACCTGTCCTCCCAGCTGCAGTATGGAGTGGTGCTGGTGTACCACCGACAGCTCCTGCCCACGCTGCCGGACCCCCTGTCTGTGCTGGAGGCCAGCGAGGGGGCGCTGGACCCCTTCTTCGGGGTGATGGAGATGGATGGCACTCTGCCCAGCCCCTTCAGACTGCCGCAGCTCCAGAAGGTCCTGGAGGCCGAGACGCCTGAGCGCAGCCCTGTGGACAGAGACAGAACTGCACCCGAGCAAGCCCTCATCGCGTCTCCGGAGTCCATCACCATGAGAGAGGAGGAGCCACGGCCCATCATAGAGttcGAGGGGCTGGATCTGCTCGAGGTGACGCCCAGTGAGATCGACCTGCTGATGGAGCAGCCAGACACCTTcccactggagagagagagagagggggagagagggagagagagagggagaggagcagagagagagaggaggagggagagggggagagaggagagagtgcGAGGGCcagagagagaggaggaagagagggagagagtgagggaggcggagagggagagaacaagagagCTGACCGAGACCCTGGCCTCGGTGGAGCAgctGAGAGAGTCCACCACCGCAGAGCCGGACGTCCTGCCCCTAATGGACGAGGACACGCGTCCCCTGGTGGCACGGCCCCTCACTCAGCTCTCCGACCTGTCTGAGATCCCGAAGAGACGCAGGCGCCAGCTGCGTTTCCTGGACCCCCACACGCAGATCTCCCAAGATGTACTGCGGCTGCAGATCGGGGACCCCCGGGTCGAGACACGCCCACtggtacctgtgtTCCCCtcagagctgctgctggagctgtcGGAGGAGGAGCGGTCACGCAGCCTCATCACCCCCGAGGGGAagtgGTCTCCGCTCGTCGAGGTGCCAGCGCTGCTGGAGTTGATCCCTGAGGAGAGAGCCGAGCCCCGCGAAGAAGAGGAGCTGACCACGCAGTCCCTGCTCAGGTTGGCATCTCAGTTTATCCGTCAGTTCCGGGAGGTGGCCTTCCACACTCTGCTGCCCCTGGAGGCGGACAGGAAAACTGCAGGGTCCGCTTTCTACATACTGCTg

Function

GO: NA

KEGG:

id description
K13054 REC8L; meiotic recombination protein REC8, animal type

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011859 True 1278 mRNA 0.63 13 5940650 5946920

Neighbor

gene id symbol gene type direction distance location
AMCG00011856 NA coding downstream 1457 5936640 ~ 5939193 (-)
AMCG00011858 NA coding downstream 47570 5889044 ~ 5893080 (-)
AMCG00011841 NA coding downstream 94118 5844281 ~ 5846532 (-)
AMCG00011848 NA coding downstream 107295 5826036 ~ 5833355 (-)
AMCG00011847 tm9sf1 coding downstream 121987 5811975 ~ 5818663 (-)
AMCG00011857 NA coding upstream 34173 5981093 ~ 5986961 (-)
AMCG00011866 NA coding upstream 74793 6021713 ~ 6028050 (-)
AMCG00011871 slc7a8,LOC104932911,LOC103358414,LOC102238406,LOC107753926 coding upstream 107164 6054084 ~ 6057440 (-)
AMCG00011870 LOC106608857,LOC105020553,LOC105894166,LOC101077604,LOC107588204,LOC106577803,LOC104932911 coding upstream 110573 6057493 ~ 6063479 (-)
AMCG00011869 prmt5,LOC107668985,LOC102797577 coding upstream 121228 6068148 ~ 6077058 (-)
G133147 NA non-coding downstream 43647 5896739 ~ 5897003 (-)
G133080 NA non-coding downstream 83485 5856663 ~ 5857165 (-)
G133076 NA non-coding downstream 86494 5853937 ~ 5854156 (-)
G132977 NA non-coding downstream 309124 5631094 ~ 5631526 (-)
G132862 NA non-coding downstream 776839 5162185 ~ 5163811 (-)
G133180 NA non-coding upstream 42194 5989114 ~ 5990502 (-)
G133181 NA non-coding upstream 45394 5992314 ~ 6035898 (-)
G133186 NA non-coding upstream 51688 5998608 ~ 5999229 (-)
G133209 NA non-coding upstream 132926 6079846 ~ 6080079 (-)
G133277 NA non-coding upstream 324267 6271187 ~ 6347713 (-)
AMCG00011842 NA other downstream 68650 5860396 ~ 5872000 (-)
G133075 NA other downstream 88060 5851880 ~ 5852590 (-)
G133032 smyhc1,LOC100136150,LOC103364123,LOC103375112,LOC101484004,LOC102294892,LOC102297239,LOC103482310,LOC106963427,LOC103135328 other downstream 146805 5707283 ~ 5793845 (-)
AMCG00011860 NA other upstream 7710 5954630 ~ 5957925 (-)
G133183 NA other upstream 45494 5992414 ~ 5993018 (-)
AMCG00011868 NA other upstream 68990 6015910 ~ 6017080 (-)
AMCG00011867 NA other upstream 88999 6035919 ~ 6040630 (-)
G133208 NA other upstream 131450 6078370 ~ 6079367 (-)

Expression


Co-expression Network