AMCG00011867


Basic Information

Item Value
gene id AMCG00011867
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 6035919 ~ 6040630 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011867
ATGGTCTTCACATTGAGCCAGTTTCCAGACTCTGCCTGCAGTCCTTACCTGATGGTCCGGACATGTGTTCATGGAACGAATCTCCAGGAAGTTAAAGGGGGCACCAATGGAAGGAAGGTCCCGCCTCCCACCCCGCCTCCCATCCCGCCCTCTTCCCTGAAACCTGGACTCGGACAGGGTGAGGTCAGCGTCACTCAAGGCAGTGACAAGGACAGCCCTAACCCCCAGGAGAAGGCCTCGGACAGGAAACCCCCAGTGAAAAAACCCAGAATACCCCAGAATGCCCGGATACGCTCCTTGGATGagccagGCAATGGGAACGTAGCACCTGGAAACAGTGAGGCATCATGACGGCAACGGAACTTGGAAAGGAGTCGTCGCGGCAACGATCACAGCTGGAACATTCCGACTGACTGAACACTCTGTGTTGGGACAGCGagaccgacacacacacacacacacacacacacacacacacacacagacacgacCCAGTCCGTCaggcactgtatgtatattcatatatatgtattaactgtaaagagagagaaagagcgacagagagggagagcgagagggagaatTTATAATTAAGGCCATATATCtatccatatatataaatacatatacacacatataggtGTAtaggacagacagatggacgGACAGACTGACAGGGGTCCTAACACTCCGGCCgcgactgactgactgtgatTGTGGCTCCCTCCGCAGTCTATGGGCCTGTATCTGGATGCCATTCCTCTGCGGGAACGCCAGGGGGCAGTGTGGACACTCCAGAAAATATTGTTTGCTTGATTATGATTAatgtgattatgattattattattattattaagcatatTCCTTTGAAATGAGTAATGAATTATTGGAATAAGTAGTTTGCAAAATTGTATACTActggtcttttttttgtttttgtttttatttagtccATCACCGTGTAACGTTGTATTATATTACTATCACAGTCTATGATATGATATAAATGATGTAAATAAGAGAGTTCTGCAGCTCCAAGGGTGCCTGTTCTGCCAGGAGTGTTATATTGCTGCCCCTGTTCTGTGACAGCAGTGCCCAGCCTGCGACGCCTGCCTGGCTGACTTCCGGCGCTGCTCTGACGCGGGTTCTTTCACGGTTGTGACCGACGCCAGTCACAGTGTCCAGATCGCGCTGTTTCTAGAACCCATGGCGGAGCTCGGCCTGGCAGCGTTGCACTCTGGGAGCATTTGCCGCACAGCTCTCGCACCTCTGCAGCACCACGCCTTCTTCTTTCTACTGTTCgtcttgcattctctctctcctcctctcctcttctctctctgtctatattgaattgtaatatattttctaagctgaataaaagaataaagaGCTGCGGCGAAAGACCGGGTGGGTGTGCCGTTCTGTGTTGTGTTACCGAGACTCACCAGCACactatacaaatattacaattaaatcatttaatgtgaaaaaaaagtactgtca
>TU167010
atttgagttagcggcctataaataattttcctaatttctttaagtactgttggagtatacacactgacacacatacacacacattttgacaCATACagccacacactcacacacacactgatgtaACTGTAATGTACAGGTGCTGCTTCACTGGAAGAGGAGgtggagagggatggagagagtaGGGCAGGGgctgaggaagagagggagacggacagagagcgagggagggagagagaagaggagcgGCAGTCCCCCTCCAGCCCGGACAagCCTGTGGACGTCCCACCAATCAGCTGCCTGAACTCCCCAGACCAACCTCCTTCTGTGAAGTCACCAACAGGGGGCACCAATGGAAGGAAGGTCCCGCCTCCCACCCCGCCTCCCATCCCGCCCTCTTCCCTGAAACCTGGACTCGGACAGGGTGAGGTCAGCGTCACTCAAGacGAAGTGATCAGAGTTACAGCTCCAGTGAAACCACAGAGATCAAAAAAAGCCCTGTCCTGTGACACAGGCAGTGACAAGGACAGCCCTAACCCCCAGGAGAAGGCCTCGGACAGGAAACCCCCAGTGAAAAAACCCAGAATACCCCAGAATGCCCGGATACGCTCCTTGGATGagccagGCAATGGGAACGTAGCACCTGGAAACAGTGAGGCATCATGACGGCAACGGAACTTGGAAAGGAGTCGTCGCGGCAACGATCACAGCTGGAACATTCCGACTGACTGAACACTCTGTGTTGGGACAGCGagaccgacacacacacacacacacacacacacacacacacacacagacacgacCCAGTCCGTCaggcactgtatgtatattcatatatatgtattaactgtaaagagagagaaagagcgacagagagggagagcgagagggagaatTTATAATTAAGGCCATATATCtatccatatatataaatacatatacacacatataggtGTAtaggacagacagatggacgGACAGACTGACAGGGGTCCTAACACTCCGGCCgcgactgactgactgtgatTGTGGCTCCCTCCGCAGTCTATGGGCCTGTATCTGGATGCCATTCCTCTGCGGGAACGCCAGGGGGCAGTGTGGACACTCCAGAAAATATTGTTTGCTTGATTATGATTAatgtgattatgattattattattattattaagcatatTCCTTTGAAATGAGTAATGAATTATTGGAATAAGTAGTTTGCAAAATTGTATACTActggtcttttttttgtttttgtttttatttagtccATCACCGTGTAACGTTGTATTATATTACTATCACAGTCTATGATATGATATAAATGATGTAAATAAGAGAGTTCTGCAGCTCCAAGGGTGCCTGTTCTGCCAGGAGTGTTATATTGCTGCCCCTGTTCTGTGACAGCAGTGCCCAGCCTGCGACGCCTGCCTGGCTGACTTCCGGCGCTGCTCTGACGCGGGTTCTTTCACGGTTGTGACCGACGCCAGTCACAGTGTCCAGATCGCGCTGTTTCTAGAACCCATGGCGGAGCTCGGCCTGGCAGCGTTGCACTCTGGGAGCATTTGCCGCACAGCTCTCGCACCTCTGCAGCACCACGCCTTCTTCTTTCTACTGTTCgtcttgcattctctctctcctcctctcctcttctctctctgtctatattgaattgtaatatattttctaagctgaataaaagaataaagaGCTGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011867 False 1506 mRNA 0.48 4 6035919 6040630
TU167010 True 1713 lncRNA 0.49 5 6036027 6038712

Neighbor

gene id symbol gene type direction distance location
AMCG00011866 NA coding downstream 7869 6021713 ~ 6028050 (-)
AMCG00011857 NA coding downstream 48958 5981093 ~ 5986961 (-)
AMCG00011859 NA coding downstream 88999 5940650 ~ 5946920 (-)
AMCG00011856 NA coding downstream 96726 5936640 ~ 5939193 (-)
AMCG00011858 NA coding downstream 142839 5889044 ~ 5893080 (-)
AMCG00011871 slc7a8,LOC104932911,LOC103358414,LOC102238406,LOC107753926 coding upstream 13454 6054084 ~ 6057440 (-)
AMCG00011870 LOC106608857,LOC105020553,LOC105894166,LOC101077604,LOC107588204,LOC106577803,LOC104932911 coding upstream 16863 6057493 ~ 6063479 (-)
AMCG00011869 prmt5,LOC107668985,LOC102797577 coding upstream 27518 6068148 ~ 6077058 (-)
AMCG00011885 NA coding upstream 72944 6113574 ~ 6123209 (-)
AMCG00011887 NA coding upstream 85967 6126597 ~ 6137761 (-)
G133181 NA non-coding downstream 21 5992314 ~ 6035898 (-)
G133186 NA non-coding downstream 36690 5998608 ~ 5999229 (-)
G133180 NA non-coding downstream 45417 5989114 ~ 5990502 (-)
G133156 NA non-coding downstream 62539 5925629 ~ 5973380 (-)
G133147 NA non-coding downstream 138916 5896739 ~ 5897003 (-)
G133209 NA non-coding upstream 39216 6079846 ~ 6080079 (-)
G133277 NA non-coding upstream 230557 6271187 ~ 6347713 (-)
G133286 NA non-coding upstream 315835 6356465 ~ 6360880 (-)
G133417 NA non-coding upstream 597617 6638247 ~ 6638592 (-)
G133480 NA non-coding upstream 649378 6690008 ~ 6692129 (-)
AMCG00011868 NA other downstream 18839 6015910 ~ 6017080 (-)
G133183 NA other downstream 42901 5992414 ~ 5993018 (-)
AMCG00011860 NA other downstream 77994 5954630 ~ 5957925 (-)
AMCG00011842 NA other downstream 163919 5860396 ~ 5872000 (-)
G133075 NA other downstream 183329 5851880 ~ 5852590 (-)
G133208 NA other upstream 37740 6078370 ~ 6079367 (-)
AMCG00011886 NA other upstream 184890 6225520 ~ 6227193 (-)
AMCG00011882 NA other upstream 190528 6231158 ~ 6233113 (-)
AMCG00011884 NA other upstream 211316 6251946 ~ 6254840 (-)
G133291 LOC105021468,LOC105907034,LOC107562413,LOC107588156,LOC106577802 other upstream 320761 6361391 ~ 6363728 (-)

Expression


Co-expression Network