AMCG00011887


Basic Information

Item Value
gene id AMCG00011887
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 6126597 ~ 6137761 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011887
ATGACGTTGGGCCCTCCGTGGGCCCCTcgGACAGCGGTGATCTCCAGGTCTCTGGATGCTCACAGCCTGCCTGAGCGACTGTCCCAGAGAGagaacacccccacccccactgcaGCACAGCCCCTCCGTCCCCCGAGTCTCTGTCTGAGAGGAGCAGGAGAGAGCAGCCTGGTGGACCCGTCTGAAGCCCCCAGGAGCAGCGAGGAGCCACAGAGAACAGAGCAGACGAACACCAGGCAGTGTCCACTGACCATGAACAACTCAAACACCACTGGACTCGACACAGACTCTCAGGACAAGTTGGAATACtcagaaaatgcattaatagTTATAATAGAAATTTTTATTGTGGTCATCGGGCTGCCAGCAAACTGCCTGGCCATCTGCAGCCTGTACCGCATGATCAGGGCTGACATGGTGGTGCCCATCTACATCATCAACCTGCTCATCTCCGACCTCCTGCAGATCATCGCAAGAATACTCCGGTTAATCTTATTGACACTTACAGACAGCGAAGGATTACGGATTGCTAAGGCTTTTCCTTTCAGTCTCTTTATCTTCGGCCTGAGTGCCAGCATTGGGTTCATGCTGTGCATCGCCCTGGAGAGATACCTGGTGGTCGCCCATCCTCTGTGGTACCGGTACCGCCGCAATGTCAGGCACGCCACACTGGTCTCTGTGGGAGTCTGGGTGCTGGCTtgGACAGCGGTGATCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011887 True 717 mRNA 0.56 4 6126597 6137761

Neighbor

gene id symbol gene type direction distance location
AMCG00011885 NA coding downstream 3388 6113574 ~ 6123209 (-)
AMCG00011869 prmt5,LOC107668985,LOC102797577 coding downstream 49539 6068148 ~ 6077058 (-)
AMCG00011870 LOC106608857,LOC105020553,LOC105894166,LOC101077604,LOC107588204,LOC106577803,LOC104932911 coding downstream 63118 6057493 ~ 6063479 (-)
AMCG00011871 slc7a8,LOC104932911,LOC103358414,LOC102238406,LOC107753926 coding downstream 69157 6054084 ~ 6057440 (-)
AMCG00011866 NA coding downstream 98547 6021713 ~ 6028050 (-)
AMCG00011881 NA coding upstream 2390 6140151 ~ 6144490 (-)
AMCG00011879 NA coding upstream 18352 6156113 ~ 6156798 (-)
AMCG00011888 NA coding upstream 33009 6170770 ~ 6192613 (-)
AMCG00011883 NA coding upstream 56516 6194277 ~ 6207902 (-)
AMCG00011877 LOC106569426,LOC108438927,LOC102797877,LOC107668975 coding upstream 79413 6217174 ~ 6222794 (-)
G133209 NA non-coding downstream 46518 6079846 ~ 6080079 (-)
G133181 NA non-coding downstream 90699 5992314 ~ 6035898 (-)
G133186 NA non-coding downstream 127368 5998608 ~ 5999229 (-)
G133180 NA non-coding downstream 136095 5989114 ~ 5990502 (-)
G133156 NA non-coding downstream 153217 5925629 ~ 5973380 (-)
G133277 NA non-coding upstream 133426 6271187 ~ 6347713 (-)
G133286 NA non-coding upstream 218704 6356465 ~ 6360880 (-)
G133417 NA non-coding upstream 500486 6638247 ~ 6638592 (-)
G133480 NA non-coding upstream 552247 6690008 ~ 6692129 (-)
G133529 NA non-coding upstream 690221 6827982 ~ 6828221 (-)
G133208 NA other downstream 47230 6078370 ~ 6079367 (-)
AMCG00011867 NA other downstream 85967 6035919 ~ 6040630 (-)
AMCG00011868 NA other downstream 109517 6015910 ~ 6017080 (-)
G133183 NA other downstream 133579 5992414 ~ 5993018 (-)
AMCG00011860 NA other downstream 168672 5954630 ~ 5957925 (-)
AMCG00011886 NA other upstream 87759 6225520 ~ 6227193 (-)
AMCG00011882 NA other upstream 93397 6231158 ~ 6233113 (-)
AMCG00011884 NA other upstream 114185 6251946 ~ 6254840 (-)
G133291 LOC105021468,LOC105907034,LOC107562413,LOC107588156,LOC106577802 other upstream 223630 6361391 ~ 6363728 (-)
AMCG00011895 NA other upstream 234739 6372500 ~ 6378472 (-)

Expression


Co-expression Network