AMCG00011934


Basic Information

Item Value
gene id AMCG00011934
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 6866617 ~ 6871500 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011934
gagggagagggagaaggagagagacaagcagaagagagagggagtcaGGTTTTGCAGTTTAttggaataaaacaacaacatctgtcttaataataacaacatgaaCTTCACTGAAGATCTTTTGCCCGTGCTTTAAGTGGGAGTCCCACACGAACTAAGACCGAGGCTGAgatccccctcttctgagtagAGCCTCTGCTCTCTCTTCATCTCTTCAGGGTCTGCAACACTGCCAGTGGCTGAGccttccctccctccatcgTAGCCATGAATCCCTATCCATCCAAGAACCCCCCTGCCTCCGCCTACTTCAACACCACACCATCCAGCTCTGGCCGACCCCTgaccctaaccctgaccctggCTAAGGCCCTGGCACCCATGACCACCGAGGGGCCAGACGATGGTACCATTGTGAGCAACCACACCTCCACGGCCGTGGGCACACTCATCCTGTCGTTGGTCTTCCTGTTGGGCGTGCCGGGCAACTTGTTCGTCATCTGGAGCATCCTGCATCACACCCGCAAGCGCTCGGTCACCTGCCTGCTCATCCTCAACCTGGCCGTGGCCGACGGGGGGCTCATGCTGCTCACCATCTTCTTCGTGGTCTACCTGGCGATGCAGAGCTGGGTGTTCGGCAACGCCATGTGCAAGATCCTCTTCTACCTGTGCTGCATCAACATGTATGCCAGCATCTTCCTCATCACGCTGATGAGCCTGCACAGGATGCTGATGGTGCTGTGGCCACAGTGGGCCCCCAGGCTCACCCGCAAGGCCGTGGTGACCCGGGTGCTGGTGTGCCTGTGGGCCCTGACGCTGGCCATCTCCAGCCCCGCCCTCATCTACCGCAGGGAGAGGGAGCCGGAGGACATGAAGGGCCGACACCGGCTGATCTGCGATGCCAACCACAACACCACATCCCAGCTGGTGTTCCAGTACACGTTCGAGACCACGCTGGGATTCGTGGCCCCATACTCGCTGATCCTGGTGAGCTACTGCCTCATCCTGCGGCGCCTGAGGAACACCAAATTCCGGCGGCCCATGCGCAGCGAACATCTCATCCTCGCCATTGTCATCACCTTTGGCCTGTTCTGGCTGCCCTACCACGTCGTCAACATGATCCAGGTGGCGGCACATCTGTCCCCACCTCACCAGAAGACGTGGCTTGACCATGTGTGGAAAAGCAGCCGGGCGGTGACCTCGGCGCTGGCCTTCATCAGCTCCTGTGCCAACCCGGTGCTGTACACGCTGGCGGGGCGGGGATACATTCGCAAGGCTGGGATGGGCTTCATGGCACGGCTGTTCGAGGGCACGGCGCCCGACTCAGGGGGGGGCACCCGACGCACACGGAAGGGACACTCCCTGAGCCGCCAGGGCAGCCGGGACAAGGTGGGACTAGAGTCTCTGAGGGACAGGGAGGACAGCACTGACACGTCCACCAAGTCCAACTCTGAGaaatagagaggagagaggagagtggAGCAAGCaaagaggggaggagagggaagagagagaggagaggagtgaGGGGTGCAGAATAGTGGACTCTTGAGGAGAGGGTTgagggttcaatcccaggtgagggacactgctgtaaaacactgtacctagattgctccagtaaaaacccagcaattttaagtcactctggatataTGGAGGGGGCAGCAGGTGAAAATGCctatctgtgtctctctccctctctacatCTAGTTGTAACAAAACCATTACTTCATTTGGGATTTTCAAAGCGTCAGCTATGCCCATTTAtacacagttaaaaaaacagaccTAATGCACAAATACACGCTAATACATGCATGTCTCCACTAGGGGGAGACAAAGGCTAATCTCAGCAGAATCTCGTTGAATGTAATCAGATTAGACAGAGGGAAAGAGGAATTTGTGTGATATTGTAACATGTTGTAAATAAAAGGTTGTTTG

Function

GO: NA

KEGG:

id description
K04297 LTB4R2; leukotriene B4 receptor 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011934 True 1944 mRNA 0.56 4 6866617 6871500

Neighbor

gene id symbol gene type direction distance location
AMCG00011935 NA coding downstream 18631 6844699 ~ 6847986 (-)
AMCG00011937 NA coding downstream 65748 6797407 ~ 6800869 (-)
AMCG00011936 NA coding downstream 83041 6782239 ~ 6783576 (-)
AMCG00011931 NA coding downstream 92035 6772500 ~ 6774582 (-)
AMCG00011927 LOC101472004 coding downstream 106477 6750121 ~ 6760140 (-)
AMCG00011942 NA coding upstream 48422 6919922 ~ 6920853 (-)
AMCG00011940 NA coding upstream 76255 6947755 ~ 6948753 (-)
AMCG00011943 NA coding upstream 92401 6963901 ~ 6964727 (-)
AMCG00011945 NA coding upstream 127708 6999208 ~ 7016329 (-)
AMCG00011944 NA coding upstream 147402 7018902 ~ 7019816 (-)
G133547 NA non-coding downstream 9918 6856221 ~ 6856699 (-)
G133529 NA non-coding downstream 38396 6827982 ~ 6828221 (-)
G133480 NA non-coding downstream 174488 6690008 ~ 6692129 (-)
G133417 NA non-coding downstream 228025 6638247 ~ 6638592 (-)
G133286 NA non-coding downstream 505737 6356465 ~ 6360880 (-)
G133571 NA non-coding upstream 98793 6970293 ~ 6970708 (-)
G133591 NA non-coding upstream 194913 7066413 ~ 7066672 (-)
G133607 NA non-coding upstream 264368 7135868 ~ 7137524 (-)
G133714 NA non-coding upstream 679795 7551295 ~ 7575147 (-)
G133891 NA non-coding upstream 1132518 8004018 ~ 8052245 (-)
G133526 NA other downstream 42029 6824264 ~ 6824588 (-)
AMCG00011928 NA other downstream 96323 6760407 ~ 6770294 (-)
AMCG00011924 emc4,tmm85 other downstream 126081 6663132 ~ 6740536 (-)
AMCG00011920 NA other downstream 234815 6607329 ~ 6631802 (-)
AMCG00011916 LOC107706350,LOC107738137,LOC107706351,LOC107668963 other downstream 320862 6539961 ~ 6545755 (-)
AMCG00011941 NA other upstream 21159 6892659 ~ 6897827 (-)
AMCG00011957 NA other upstream 342737 7214237 ~ 7240360 (-)
G133712 NA other upstream 615169 7486669 ~ 7549652 (-)
G133713 NA other upstream 621370 7492870 ~ 7500924 (-)
G133715 NA other upstream 673855 7545355 ~ 7556708 (-)

Expression


Co-expression Network