AMCG00011977


Basic Information

Item Value
gene id AMCG00011977
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 7695013 ~ 7754715 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011977
TATGTTCTTCTGGCTCCAAACCTCTTGAGGATTGACAGTTCAGAGAATGTGTTTGTTGAGGCACAAGGAGTGAGCGACCCCATTCAAGTGACAATCAGACTTCAAGCCTTTTCCACCCGGAAAGTACTGTTTGAAACTATAATCACACTCGATCAGAATAACAAACATCAGGCTCTCATACCCGTAAAGAATCCTCAAGGCATTGTGATCAAACAAGAGAGTCAAAAGGCAATCAATGGGATATTCCGAAGAAACTTAAAGCTGCCGGAGGTAGTCAATGAGGGGACATGGGAGCTGGTGGCCAGATTGGACGATTCTCCCCTGAACACTTTTGTTTACCAATTCGAGGTGAAGGCACATGtgctGCCATCATTTGAAGTGAGTGTGAAGCCCCGGAAGAAGTTCTTCCACATTGATGATGAGCAGTTCTTTGTAGACATCAGTGCCAATTACCTTTATGGAGAGGTGGTCAGAGGTTTTGCCTACGTGGTGTTTGGTTTTGAAGATCAAGACAAGAAGAGGACAAACTTCCCTGCCTCGTTCAGGAGAATAGAGttaaggGAAGGCCTTGCCACTTTGAAGAAATCTGACATCAAAGCGACAGTTCAGGATATAGAGAGTTTATTGGATTATTCCCTCTATGTCAGAGTCACAGTGTTCACGACAACAGGCACTGATATGGCAGAAACAGAGAAAAGTGGGATCAAGATGATTTTTGTGACGAATCCTGATGGATCCCCAGCTGATAAAATCCCTTTGGAAGTGCAGCCAGGAGCCCGGCAGTCCACTACCAATAGCAACGGTTTGACTACAGTAGAAATCCCCACACAAAACACTGATACATCTTGGATTATCACAGTGAGGACCAAAGTTAAAAATCTGCCTGAAGAACATCAGGCACAAAACCAGATGACTGGCTTGGCCTATAGATCCCATAACCCCAGCTCCAAAAACCTACTGTATATCAGCTTAAGAAAAGAACACATCTCAGCCGGTGACTCCTTCTCAGTTCATTTCAATTATTACAATGAAAATCCAACCCAGGGAAATCAGATTACAGTCACCACCTATTTGATTATCAGCAAAGGTAAAATCATCAAGCATGGCTCAGTGCAAAAAGATAGAAATGTGGTCACAGCTGTGCCACTCACTGTCACCAAAGAAATGATTCCATCCTTCCGTATTGTGGCTTATTACACGTTGCCAGCAGGAGGAACAACTGAGGTTGTGTCAGATTCTGTGTGGGTGGATGTGGAAGATACTTGCATAGGAAAGCTTCAAGTGGAGTCCTTggacaggaacacagagtaCAGACCTGGTAAAATGTTCAAGTTGAAAGTGAGGGGAGACCCCGGTGCCACCATCAGCCTGGTGGCAGTGGACAAAGCTGTCTTCCTTCTCAATGATAAAAATAAGCTGACACAAACTAAGGGGGAGGATTGGACAGCATGGGTGTCTTCACTGATGCCGGCCTGCTGTTCAAAACAAGCACGGGGGAAGCCACCACTGCTCGAGAAGAACAATACTAACCTCCTGGTCATTATAGAGAGCCGGTACAGAGAAAAGCAACTAAAGAGGTGCTGCCGCGATGGACTGACAGACATCCCGATGGACTACACATGCGAAAGGAGGTCGCTGTACATCACGGAGGGACCCGAGTGCGTCAAAGCCTTCCTACACTGCTGCAAAGAGATCACAAAGAAGATAAAAGAGATTGACAGCAGAACAGGACTGGTGCTGTCCCGTAGTCAAGAGCCCTTTGACATTCGGGTTAAAATGAAGTTCTTTGTGGATCTGAAGATGCCGTACTCGGTCATAAGAAATGAGCAAGTGGAGATAAAAGCCATTCTGTACAACTACGCCTCAGATCCATTCAGGGTCCAGGTTGAGctagtggaaaaaaacaaagaaaacagagagATCTGCAGCCTTGCCAGCAACACTGGCCGCTTCAGACAGGACATCAATGTGGAGGCAAAGTCTTCTCGAGTGGTTCCTTACACCATTATCCCTTTGAAGATTGGAAATGTAGAGATTGAAGTCAGAGCCAGAGTCTACGGGGAACTAATAGGAGATGCAGTGAGGAAGACATTGCGAATACTGCCAGAAGGGGTGGTGACAACCATTGAGAATACAGTGGTTTTGAATCCCTCAGCCAGAGGTGGGAAACAAATTGTAcaatttcagaaagaaaacTTGGACACCTTGGTTCCAGACACAACCCCACTGAGGTACATCACAGCTACAGGGGATGTGCTGGAAGACACTATTAGGAATGCCATAAGTGGGTCTGCCCTGACGAGCCTCATTCGCATGCCTGGCGGTTGTGTGGAGCAGAATATGGCCTCCATGGTGTATCCAGTCATAGCTGCCCACTATCTAGACAAATCTGGGGAATGGGAGAGTGTCGGGCTGAGCCGGCGGGAGGAAACTATCGGTTACATTAGCAGCGGTGAGAAAGTCGGGctgcggggggGTTATATCAGACAGATGTCTTATCGCAACTCAGATGACTCCTATCCACCTTACAACAGACAGAAGGATTCAAGTACCTGgcTGACTGCATTTGTCGCCAAGGTGTTTGCCTTAGCTTACCCCTTGACACATATAGATGACGACAGACTGTGTAACCCACTGAAATTCctgattcaaaataaacagatgcCTGATGGGTCTTTCACAGAGGACGCCCCTGTTGCTGCTCCTTATCACATGGGAGGGTTACAAGGAACAGAGAGCAAAGCAACGCTGACGGCTTTTATCTTAATTGCAATGGCTGAAGCTAAAAGTTTCTGTCCGTCGTCATTACAGTCTAGTATCCAGACCAGTATGGGCAAAGCAGAGCGCTATTTGAAGAGTCAGCTTCCCAGTCTCAGCAGACCCTACTCTGTGGCCATTTCGTCCTACGCCCTGGCCTTGATGGACAACCCTGACAGGAGCTTTCTGGAGAGGCACCTCGGGAACTCTGGGTCAGCAGGTGGCACACAGTGGAAAGATGGGGACATAACATACACGTTAGAAGCCACAGGATATGCACTGCTGGCCTACCTGAAGATGGGCAGTTTGGATCAAGTGGATATCATATTTGAGTGGCTAGTGGAGCACGGGAATGCCAAAGGTGGATTTGGATCAACGCAGTCCACCATGGTAGTTTTCCAGGCCCTGGCAGAGTATTTGATCCAAAAGCCTCTGATTGAACATACGGAATTAAACTTGTCTCTCTTCATATCCGGCCGGAGCACCATTCCCAGGTGGAAAATCGAGAAAAGCAACTATCACGTGCCTAAATCAGAGAAGATAAACATCAGGCAGAACTTCACGGTAGAGGCCACTGGACGCGGTTCTGGGAAGCTCACGGTGGTAACTGTGTATAATGCTCGCCCAAAACCagaggaaaagaagaaatgtaaaatgtttgagTTGGAGGTGAACATTGAGGAAGTTTATAAAGTCCAGGTTTCTGAGATCATCCTCAGGCAGGACTATGATGACTACAATGTGGTGATCAAACAAATCATTAAGCAAGGGGGAGGTGAAGTCATTCAAAATGACAAGAGGACGTTCCTCTCCCACGTGTCCTGCAGAGAAAGCCTGAATGTCAGGAAAGGCGAGGAGTACCTGTTCATAGGACGACCAGATGACACAATATCCTCTAACAAAGAAGGCGATCCAGAAAGCCTGAACGTCAAGAAAGGGGAGGAGTACCTGTTCATAGGACGACTAGATGACACAATATCCTCTAACACACATGGCGAACCGGCGATGCATATCCTGGGGTCTGAGACATGGCTGGAGTGGTGGCCCCATGATCAAGACTGTCAGACTGAAGAGAAGCAGGAGACCTGTGAGGTCTTGGCAGCCTTTGATGATGAGCTGAGTACTTTTGGCTGTCCTAAC

Function

GO:

id name namespace
GO:0050790 regulation of catalytic activity biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011977 True 3897 mRNA 0.47 30 7695013 7754715

Neighbor

gene id symbol gene type direction distance location
AMCG00011972 NA coding upstream 11760 7599508 ~ 7683253 (+)
AMCG00011968 NA coding upstream 116665 7577356 ~ 7578348 (+)
AMCG00011960 NA coding upstream 213383 7471715 ~ 7481630 (+)
AMCG00011961 NA coding upstream 243342 7441388 ~ 7451671 (+)
AMCG00011962 NA coding upstream 311043 7382975 ~ 7383970 (+)
AMCG00011976 NA coding downstream 24511 7779226 ~ 7782991 (+)
AMCG00011975 NA coding downstream 31135 7785850 ~ 7788725 (+)
AMCG00011979 NA coding downstream 36298 7791013 ~ 7803080 (+)
AMCG00011981 NA coding downstream 61381 7816096 ~ 7820392 (+)
AMCG00011980 NA coding downstream 123460 7878175 ~ 7884261 (+)
G133665 NA non-coding upstream 119848 7551295 ~ 7575165 (+)
G133681 NA non-coding upstream 138301 7545283 ~ 7556712 (+)
G133682 NA non-coding upstream 147258 7546644 ~ 7547755 (+)
G133669 NA non-coding upstream 175719 7509749 ~ 7519294 (+)
G133642 NA non-coding upstream 340048 7354370 ~ 7354965 (+)
G133783 NA non-coding downstream 75849 7830564 ~ 7843471 (+)
G133820 NA non-coding downstream 248065 8002780 ~ 8003512 (+)
G133825 NA non-coding downstream 307878 8062593 ~ 8117249 (+)
G133832 NA non-coding downstream 325040 8079755 ~ 8100437 (+)
G133833 NA non-coding downstream 366184 8120899 ~ 8124699 (+)
AMCG00011971 NA other upstream 119821 7559663 ~ 7575192 (+)
G133667 NA other upstream 186262 7505082 ~ 7508751 (+)
G133619 NA other upstream 452713 7236941 ~ 7242300 (+)
AMCG00011948 NA other upstream 554881 7135868 ~ 7140132 (+)
AMCG00011917 NA other upstream 1041282 6644876 ~ 6653731 (+)
AMCG00011987 NA other downstream 170421 7925136 ~ 7928238 (+)
AMCG00011986 LOC107376962,LOC107102122,LOC103472755,LOC103153162,LOC106951371,LOC106916934 other downstream 205983 7960698 ~ 7976097 (+)
AMCG00011993 NA other downstream 273348 8028063 ~ 8037681 (+)
G133822 NA other downstream 297409 8052124 ~ 8055021 (+)
AMCG00012006 NA other downstream 623618 8378333 ~ 8397041 (+)

Expression


Co-expression Network