AMCG00012014


Basic Information

Item Value
gene id AMCG00012014
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 8726823 ~ 8730941 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012014
CGGCTGTGCTCTGATTACCAATACCACGTCGACCCGTAGAGTCTGTCCAACATCAGGCTGTTAGacgggttttatttatttgcttctgTTAGGCATTGTGATGTTGGttgtcttgtttatttgaatgagTGGTTGTAGACGTTGTGCTCTGAGGAAGTGTAGATCCCAGGTGGACTGTAACCATCACTGGTTCCCCCCTGGCTTGATGGAGTCACAGGAAGCTGCTACAGTGCTGCAGATATTAACAGCAAGGATGTCCACCCTGGTGTTGCTCAGCCTGTGGGCTATGGGGGGCTGTGTGGCTTTCCAACAGACTGTCATGCCTCTGTTGCCCAATGTGCCTTTCCTGACGGTTTGGAATGCCCCAACGCAGGCCTGCAAGACCAAGTATGGTGTGGACCTGGACCTCAGCCAATTTGACATCACACTGAACCAGAATGAGAGCTTCATAGGGGACAATATCACCATCTTCTACATGAACCAACTGGGCCGCTACCCTTTTTACACACCCCAGGGGGCACCAGTGAATGGGGGGGTGCCACAGAATGCCAGTCTGCCAGAACACTTGCAGTATGCACGGGCTGACATCAAGCGGTACATCCCAAACTCTCCTTACTCAGGCCTGGCGGTTGTGGACTGGGAGAGCTGGCGACCACTGTGGGTGCAGAACTTTGATTCCAAAAAGGTGTACAAGGAGGCCTCCAGGGCACTGGTGTGGCAGAAGCACCCCAATTGGACCACGCTTCAAGTGGAAAGCGAAGCCCAGAGGGAGTTCCAAGAGGCTGGACGGGCGTTCATGGAGGATACACTCCAGCTGGGCCGCGAGATGAGACCTGGGGGCCGGTGGGGGTTCTACGGTATGCCCAACTGCTTCAACCAGTACACAAACACCTCGGTGAACTACACAGGGAAGTGTGCTGAAGTGCATATGAAGAGAAACGATGAAATGGGCTGGCTCTGGCAGGCCAGTTCTGCCCTGTACCCAAGCGTCTATCTGGGATCAGGCCTGCGTGGCAAGGGGGATGCTATCCGGCTGTACATCCAAAACACTGTATTGGAAGCCAAGAGGTGCTCAGGACAGGTGACCCCCATCAGCCCATCTGTGCTGCCCTATGCTAGCATAGTCTATTATTCCCTGGAGTTCCTTTCACAGGAGGACTTGGTTCACACCATTGGGGAGTCCGCAGCACTGGGAGCAGTGGGGATTGTGCTCTGGGGAAGTGGACAGTATGCAGCATCTCAGGCTAGTTGCACCAAGTTAAAAACCTACCTGCATGGGGTGCTGGGCAGGTACCTGCTGAACGTGTCCACAGCGGCAGAGTTGTGCAGCAAGGAGAGATGCAGTGCTAATGGACGCTGCATGCGGAAAACCACCAATAGTGATGCGTACCTACACCTCAATCCTGCCAGCTTCACAGTCTTGCAGAACCTGACTGTCAAGGGAGCACTGAGTGAGGGAGACCAAGAGTTCTACAACACAGAGTTTGGGTGTCAGTGCTACAAGGGGCACAAGGGAGAATCCTGCACTCAGACTGACACTGGCAGCTCCACTGGCCTGAGGACCACTATGATCAGCCTCCTATTCTCCATTAGCCTGTTGTGGCTGCTATTGTAGAGCAGTAGGGTGGGAGGCACAACTGCccctgcagaaaacaaatgtgttcctTCTCCAGGGTTGACTGGTTACCTATCAATTCTAGTAGTGTTTTGCAAATCTTATGACAAAGGAAGAAAAgtgaaaaagcaacaaaacaaacaagaaaacaaatgcattaatttgCAGCACCTATCCTCAATAACATAGTGAGGAAGTGATGGATGGCATCTGTAATAATGAGCAAATGGCCATCAGTGGTAGAAAGCTGTGTGACTGCCAAGCATTTATAGAGGAAAACAAAGTGTATCTGAAAGCAAAGCAGTTTCCCAGAGTAGCCTACTTGTTTACAGATTACTATTTTGCACATAATCATGgagatacatttcaaaagtaTGGAAGGTGATTGTCGTTAAGTGGATGCTGTATTAATACAATGAGGTCATTATGCTGAGAAGCCCAGTCAGTTAGGTTGTCAGTGTTATGTAGACACTAGTTGCTGAGATACCATTTGGGGTTAAAGGGTAAAGAAAAAAgggtaaataataaatgaagaaacagaACATAAACCTAGGTTCTGCACTTAAttacaaacatgaaaaacaaattgcatacTGTGTACAGGCTGTGTAGGTGCATACAGTAGCCCTAATACTGGTACATAATATTAACTCCCTCCTTGAAAAAGAAAGGTCCTGCAACTCTTCTCTCACCGGACATAGCCTGAAGGCCTGAAGGAAGAGTATTCTTCCAACCCAGAACTCTGGGCTGGGCACCTCTACAGCTGGGGGAAGAGAAAGTGAAGCCTTTGAGCAAAGAGCTGATGAACAGGAACAGACACACCCTCTTGCCTGAAGAAAGAAGAGCACAGGATTTAATCATGTGTTAAgataatttgtatttctattttccCACCAAGAAATAAAGTACTTTAATAAGGGCATAAATGAAAATCAGTGGAATTTGTGTT

Function

GO: NA

KEGG:

id description
K01197 hya; hyaluronoglucosaminidase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012014 True 2564 mRNA 0.48 4 8726823 8730941

Neighbor

gene id symbol gene type direction distance location
AMCG00012015 NA coding upstream 28376 8678904 ~ 8698447 (+)
AMCG00012016 NA coding upstream 55999 8670489 ~ 8670824 (+)
AMCG00012011 NA coding upstream 124947 8595016 ~ 8601876 (+)
AMCG00012010 NA coding upstream 138842 8587130 ~ 8587981 (+)
AMCG00012007 NA coding upstream 257995 8464205 ~ 8468828 (+)
AMCG00012019 NA coding downstream 74160 8805101 ~ 8839751 (+)
AMCG00012023 NA coding downstream 117385 8848326 ~ 8866791 (+)
AMCG00012022 NA coding downstream 152688 8883629 ~ 8885897 (+)
AMCG00012024 NA coding downstream 171355 8902296 ~ 8910971 (+)
AMCG00012021 NA coding downstream 190967 8921908 ~ 8928713 (+)
G134035 NA non-coding upstream 22855 8703749 ~ 8703968 (+)
G134034 NA non-coding upstream 24225 8702349 ~ 8702598 (+)
G134033 NA non-coding upstream 26205 8699411 ~ 8700618 (+)
G134019 NA non-coding upstream 99640 8624218 ~ 8627183 (+)
G134018 NA non-coding upstream 103603 8619507 ~ 8623220 (+)
G134068 NA non-coding downstream 71582 8802523 ~ 8802878 (+)
G134084 NA non-coding downstream 157776 8888717 ~ 8888946 (+)
G134141 NA non-coding downstream 463621 9194562 ~ 9195917 (+)
G134222 NA non-coding downstream 670513 9401454 ~ 9414917 (+)
G134236 NA non-coding downstream 803373 9534314 ~ 9538974 (+)
G133974 NA other upstream 163609 8561042 ~ 8563214 (+)
AMCG00012008 NA other upstream 206175 8510011 ~ 8520648 (+)
AMCG00012006 NA other upstream 329782 8378333 ~ 8397041 (+)
G133822 NA other upstream 671802 8052124 ~ 8055021 (+)
AMCG00011993 NA other upstream 689142 8028063 ~ 8037681 (+)
AMCG00012043 NA other downstream 549047 9279988 ~ 9309931 (+)
G134291 NA other downstream 920408 9651349 ~ 9653234 (+)
G134295 NA other downstream 925416 9656357 ~ 9656727 (+)
G134338 NA other downstream 1121949 9852890 ~ 9867143 (+)
G134340 NA other downstream 1204985 9935926 ~ 9936411 (+)

Expression


Co-expression Network