AMCG00012019


Basic Information

Item Value
gene id AMCG00012019
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 8805101 ~ 8839751 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012019
CAAAGGAGCAGCGCGGCGGTGCAGTTTCGGATTGTAATCCCTGGGAAAGCCGAGATTTGCAGAgggatcaaaataaaaacaaacggAATAAAAAGGCACCGCCGGGATGGAGTCAAAACACCAGCACAACGAATAACGATATGAAGGGCTGGCTGGGAAAATGGGCTTCACGATGAGCATCGGATAATCGTATGGATGTACACCTGGCATCTGGCAGGAGATTTGGGCATCTTTCTACCAATTCCcttagattatttttattttaaactagttTCGAAAGCGGAGGCGGCGCCGCGATCCCCGGCGTCGGCGTGGGTTCGCGCCCGGCAGGGAGGAGGCCCCAGGCGGCGGCACTGGGAACCCGAGAGCGGGGATAGGCCTGGGCGCCGGAAACTGGAATTGCGGTCGTGTTTTTCGGAACAAGGgaaggacaaaataaataaataaaataatacgcATTGGGGAGTGAGAAGCGCATTGTGTGTAGATGGTGTTTGTATAGGCCGGGGATCTTTATAGAccgtttctttatttaaaacataaaaaggatcCACAAGCGCCTGCTCTCTTTTGATCTCTCCTGCGGTGTAACCTGTGCGCGTCGGGATATTATGGGATACAGTGGGTGTTTTGAAGTGGTTTTTGTGGCAGAAACACAATTGTGTGGTGTGCACGCACCTGCTGTGTTGTGTCGCTGAATGCACTGCTTTAGATTTGATTATATTACCGACATAAAGGCGAAactggaaaacagaaataagcATTGCATTTACTGACATCATTCGCGTGCATGTCGTGTTTTGCTTGCAAACAATGAAAGGGTTATTCTGCAATGAAGCAtatagttattgctgttattgaGACTTTGAAGACTGACCAACTagctatttttaattgttattattacagtgGATCGTCTATTGTATCCCACTGCCGCTAGTTTCCATGCTACATTGATATACAGCCCATGGGTTGATTGAATGGGAGCTACATGGTGCTGTCAGTGTCCTTAGCTCCTGCTATACTGGAATAATCACAATGCTGCAGCTGAGACACCTCTAATTTTAGCACTAACACCAATTGTTACCCCTGGGGATTAACCGCACCGATCTGATGTAATTTGAAGTTTACAGCCAGGCAAGTTGCAGCTGCATTTGTTGCAAGCAAAGAGAGAAAGTTATGAATCATTGATAACCATATTTTCCACTGATAACACGGTGACTGGACCAACTGATCCGTTTCCTAGTCTAAACATTGACAATGGGTGAGGAGGAAGCTTTTCCCATTCGCTCCAGTGACATGCATCGCAGGGTGGGGATCCCAGTAGAAATGGGGTGTTAAATCTGTGCACACATGCCGCCAGAGAAAAAAAGCCAGGATTGCACGGTTTGGGGGAAATGTTGATGCTTGGAAATGGTGcagactgtttaaaatgaaactaaatctGCACACCCTGGCAGTGCTTTGAGGAGTGGTGCTGCAACAAAGTTTTGAAACGGGCGATATTTGACTTCGTATTCAAGTGAGTTGTGCAGTCAAACATaggggttttattttattttaattttttccagctAATTTGTTTagttgcttatttatttatgttttatatacatgttttaaatgctaCAAGGGAGATGGAAATGATACAAAAGgatcaaaacaaaaggaagtgTTTACttgccactgttttttggtgACACCATCTTTCTTGGCTTGGATTTCTGTTACTTCGGACAGTTGGGAAATATAGCTGAACATATACATactgacttttgtttttgaagacttTCGAagacaaggaaagaaaagttgTTTGCACTTTATTTGGGGAGACTAACTGgacaagaaaagcaaaatgaCTCTAATTTTAGCATCCTGACCCACCTCACAAGAACCTATCCCAGatacattgaaacatttttcCTATTGGGTTTGGACTCGAAACAAGGACACTGGCTACATTGGACATAACCGGACTATAGCTATGAGCCTTCGAACTCCCACGTCGGCTCTGGACAGGTTAAGCAGCCTATCCATGGGAGACTCTGACCGCAGGAATTCCTCCGGCCAGCTGAGGGAGTCGCTCTCTGACTGCACCACTGAGAACACAGGGTTAGTGCAGAGGTGTGTCATTGTGCAGAGGGACCAGCTCGGGTTCGGGTTCACAGTATGCGGGGAGCGGATCAAGCTGGTGCAGAATGTGAGGCCAGGAGGCGCGGCAGTAAAAGCGGGCGTTCACGAGGGCGATAGAATCATCAAGGTGAATGGATGCCTGGTGTCTTCAATGTCTCACCATGAAGTGGTGAAACTAATCAAATCCGGCACCTATGTGGCCCTCACCTTGCAAGGGCCGCCCCCTTCGACGgcatccctccctctccagcCCCTACCAACGGACATCTCGCCCAATCACAAGGTGCCGCCGGGAGGGGTGAGcccacccccgcccccaccccccctgccACCAGCCTCCCTGACCCAGCCCTCCTCTCAGCGCATCACCGGGCCCAAGCCACTGCAGGACCCTGAGGTACAGAAACACGCCACTCAGATTCTCAGGAAGATGCTGAAACAGGAAGAGGCGGAGTTACAGGATCTATTGGAGGAGCAGTTACgaaacccctccccttccctGGAGGAGCGAATAGAGAGTGCGAGGAGGCGGGCCAACCAAATGCGAGTGAAAATGCAGCAGGACCTGGAGGGCACGCGGTGCAGGTTGGAGTCTGCGGCCAGCTACCTGAGAGCGGGAGAAGGTCGTCTGTCCATGGATTCACAAGATGGCGATTTCGAGGGTTTTGAGAGCCCCAGGTCTTCCCCTTCGCTCCCGTCTCGGACGTCCCAGCACAGGAGACAGGGCTCGGAAACGTTCTTACCATCCGAGCAGGGCTCAAGACTCCAGATTATTGGgccagaggaagaggaggatgacgATGACTCCTACACCCAGAACGAGATGGACGGTCCCTTTCAGGATATAGAGCTGCTGAAGACGCGCCCGGCTCACATGACCGTCTTCATGCGATACATCTTCAGCCAGCTGCTCGATCCCAACCCTCTGCTCTTCTACCTGTCCGTGGAGGCCTACCTCAGCGCCAGCCCGAAAGATGCCCGCTCCATGGCACCGCAGATCTGCTCTAACTTCCTGGACAAAGAGGCGCCTTTAAAAATCCGCGTAACGGATGACGTCATGACAGACATAGacagTCGGCTTCAGGCGCAGGAGGACATCCGTGGGCCTCTGTCCGACATCCAGCAGCTGGTGCTCCCAGAGATCCAGGAGCAGATCCAGGATTACAGGTCTAAGCACGAGGAAGACAAGAGCTCTCCCATTGCTTCTGCTGTCCTTCTGTACTTGCGACATGCCGGCATCAAACTGAGGGACTCCCGGGTCTTCAGCATGCTGGACAAATCCCAGGAGAAGGAGAAGTGGCTGCCGTTCTTCCCCAAAGCCAAGAAGCCTAATGCTACCAAGAAAGAcaaggaaaaggagaaagacGGGGAGGACAAGAAGAGGAACCCCATCCTCAAATACATTGCAAAGCCGCGCAGCACCTCGCAGTCCACATTTCATGTTCCGTTGTCACCAACAGAAgTTCGCCCAGGCAATGTGCGCAATATCATCCAGCAGTTTGAGAACAACCAGCATGAAGGAGGCGAGCCGGGTGCACAGAGGCTGTCCACCGGGAGCCTGACCGAGGAGCTGCTGGAGTCCGAGAGCCTGGGCATCGGGGGGGTGAAGCTGGCGCGCTCCGAGTCCCTGAAAGCACAGGGCGAGGGGCGCAAGCCGCGGGTGGAGGTGGTCCCTCGGTCCCGCAGCGACGTGGACATGGAGGACGCAGCTGAGGAGAGGGACCGGGAAGCGGCCCGCCTGCACCAGtccgcctcctcctccgcctccagTCTCTCCGCCAGATCCCTGGAGAATCCCACCCCTCCCTACACTCCCAGGTCAAGACGGAAAAGCATAGACTCCCCAGTCTCGATGTTCCCCGAGAACCTACTCCCCCACCTGCCAGAGGATGACCCCGACACGCAGAACTGGCAGGAGACGGTGGGGCCTGACATCCTGTCCACCCTGGAGCCCCGGGAAATCGACCGGCAGGCCGTCATTTACGAACTCTTCACGACGGAATCCTCACACCTGCGGACGCTGAGGGTTCTCGATCAGGTCTTCTACCAGAAGATGAAGACCATCTTGAACCAGGAAGAGCTCGGCTGCATCTTCCCCAACTTGCCGGAGGTTTTCGAAGTGCATTCGTCCCTGTGTGAATCAATGAAGAAACTCAGGGAGTCTTCGATTGTGCAGAGCATTGGTGACATCATGCTAGTGAGGTTTGAAGGGGCCGCTGGTCAGGAGTTCCAGGAGAAGGTGTCTCAGTTCTGCAGTCACCAGGCCCAGGCCCTGGAGCTCATCAAGAGCAAGCAGCGCAAGGATCCTCGCTTCCAGCAGCTCATTCAGGAGTGTGAAGCCAATCCACAGTGCCGGAGGCTACAGCTGAAGGACCTGCTGGTTTCGGAGATGCAGCGACTGACCAAGTACCCTCTGCTGCTGGGGAACATCATGAAGTACACCGACGgctccAGTCCGGACCTCCTCTGCCTCCAGCGTGCTCAGGACTGCTGCCGCGGGATCCTGAAGAATGTCAACGAGGCGGTGAAGGAGACGGAGAACAGGCACCGGCTCTGCCAGTACCAGCGCAAACTGGACCTCACGGCCCTGGAGAGGATGACCAATCCAGTGGCGGCGCAGTTCAAGAACCTGGACTTGACGACAAAGAGGATGATCCACGAAGGCCCGCTGGTATGGAGAGTCAGTAAAGATAAAGCCATAGAGATCCAAGCTCTGTTACTGGAGGACCTGCTGGTCTTGCTGCAGCGGGTTGACGATCGGTTGGTCCTCCGCTGCCCGACCAGGAACCTGGGAGGAGGCAACAACGATGTCAAGATGTCCTTCAGCCCCATCGTCAGTCTGGACTCCCTGCTGGTCAGATTGGTGGCCACTGACAACAAGGCCCTGTACGTCATCAGCACATCAGAGCGACAGATCTACGAGCTGGTGGCAGGAACGTCCTCGGAGAAAAACACtTGGAAAGACCTGTTGGAGAAGGCAATCTCCCTGGCCTCTCTGTCGCCGGCTCCAGACAAACACAGGACAACGGCAGTCTCGTCGACCAGTCTGGATCTGGAGTCTTCAGTCTCACCTGGCAGTGGAGTTTACCAATCGGAAGATTCTCTGACTGAGAGCCCCGTGTCCATGGAGGCCGAGTCCCCAGAAGATGGCGACGAGGTCCTTACGCCCACCCCTCCGGCCGACCAATCAACGGAGAGCACGGATGACCTCACGGGGCCCAACTCCGAGGTTTTCCCTCCCCCTACCTGTGAGGGAGGGATTGCGGACGCTGCCTTGCTAGATGTGGAGAATCTCCggcatttgatttttaaaaacattgacgACGGGTGGAGCCAGGACTCGGACGACACACCCACCAACGAGACTGCCAATGAGACGCCCAGAGGAAGCAGCCCTTTTCCGTACCCcgcggagggggaggggaaaggCAGTGTCAACGCCCCCAAGTCTACAAGCAACAGCCAGTCAGAGTCCCGGGCCACAGAAGCCCCACCTCTTCAGTCAGTGTCCAGCATTAAAGTGGTCCGGAAAGCTGAGGGGGCGGGCACTTCTTCTATCCCTGACGACATCACTGATGTCACCCTTGACTCCAGCCAATCATGCGAGGAGAAAAGAGGCGGAGCCAATCTAGATGGCAATATGTTCTACCTGGTTATGCCAGAGGGTCCAAAGGAGAGCAGCACTGACGATACGGATGCGGTTAATGCACAGGCGGGGAACGGGGACGTCCGTGCCGATTCCAAGCAGGAAGTGACTTCATCGCTGGGGGCAAGCCAGGCCATCCCGGAGGCGGACCGTAGCCGGTTGCGCCTCTTCAGCCCATTGCAGCCGAAGGTGCAGCGACACGTCATCAGGAACGTGGATGAAATATTCCAGGCTATCGAGGAGCTGACTGCCAAACTGCACAAACTAAGGGAAATTGAAGTGGCTCATCGGCAGCTAGTGGAATCGCTGTCGGAGCAGCCAGCCAATCAGGGCACTGACCACGCCCAGGGGGAGCCCACTATACTTAGGACGCGCCCCTTTGACCGGGGAGCAGGTGATGGTAAGGAAGGCAGCCCAGCAGAAGCCAGTCCACCTGAGATACAGTCCAGTGGCTTCTGAAATGCCGATGTCTCCCCCCCCATGGGTGCACGGTCGGATAAAGCAGAGCCTGAGAACTGACTGCTGACAGCCGGGAGTCGTTTCTTATTCTCCGCACTCGGATGTTTCCCTATTTTCCTGCATGAACTGCCTTACAGCAAACattagggggggggggaaatacactaaatgttaaaaagaagaaaaactacAGAGAACATGAAGGAGGAGCTTAACTTggaacttgttttattttttcttctacggGCTGAACCAAGCTTTGGAGGGAAATTAAGGTATTCATATAGAAGTTAGCCATTGTGGCTCCACGACAGTATTGTTCGCTCAACGGCACATCCTTTTTGAGAGGCTCAGAGATTCTCTTCTGTATGAGCCTGGCATCTTTCTTTGCAGGTTTTTGGTACTTTGGGTTTAAACTGTGAAATGGGCGCCATTGTGGCTCCAATTCGGTACACGTTCTAAACTGTAGCGCAGCTTGAGCCGAAGTGACAGACACGGAAAACAAAAAGGGGGTGCACAGGAAAAAGTGTATATTGGAAACGTTGTATgtgtcccccctccccctcaagGAGCCAGAAACTCTGCAACAGGTGCCGTTTCGGCTCCATTTTGGCACCATGTTCTGAAGGAGCACCACTTGAGCCAAGATGGTGGACCAGAAGCACTCGGTTTCATAACTGCCTGTTACGGTATTTCAAGCTAACTCTTCATCACTGTATattctgcttctaacacatgagGCAAACACCATCTTGGCTCTGACACAGGGTGGGCACCCTTTCCAGATCTATAGAGGACTTGGAACCAACATGGTGGATGTTAGGACTGGGTTTAACCATCATCCTGTTACCATAGCTATCTATACTCTGCTGCCTGACAGCCAAGCACAGCACTGGGAGAGTTTAGTCAATTATCTGATGCGTTGGACCATAAAAATCTCTATTCTATGAGTTCAGCCAGTACATCCCCcttacagtacacagtacacaccACAGAAGGAAATTACTTCACAAGTAGTTACATTAAGTCGCATTAAGCTGTACCTCCCACACATAAAAACTCAGATATAAGAAGCCCATCTGTTAAAGAGACTCTCATCATGGGGTATGATATTAAATGAAGGAATATTTGCACCTAATTGAGACGCTTCTGAGAAATAACAGGTTTTGATAAGCAATCCAAAAAGTAGCAAGCTCAGTGATTTTCTGAGATAAATGTATTACTCCTTGCAGTGTttgtggattaaattaattaatttgggttttatttaatgtgttttttgccTGTGAAACAATAGAAATCTTGGTTAAATcctaaaacaaaccattttagTTTCTGTTTCCAGTGGATTTATACACTCAAGAACAAAACCGATATAACAGATCTGCCATCTTTCTGCTGGGGCAATATTTTTATCTTGCAACGTGactacttttacattttcatcaagcaagcacatttttttttcttttctgaaataaacagGCATTACACAGGGATGTTTGACAGGGAACAAACTAGAATAATAATCTGAGGTTTCTGCCTACAGGAAACCAAACAATATTTCTCTATAGACCTGCCTTGTCAGTCTGGAGATTGTACAGGCAGTTTTGCtgatagagaaaaacaaatgtgtacagGGGAAGGGAGTTTAGACAGGATATGGGGTTGAGGGCTGTGGCACTGTGTATGTTGCCTGGCTGTGTCCTTGGCTGGTGGAAAAAACTTCCAGAAAAGAGGCTGAGGATCAGTTGCCTCCTGTTTCATCGCACTGGCATCAGCAGGCTGCGCTCGTAAAGACTAGAGCAGGTCCTGCAAGTCCAAGATGAGGAAGTTCACAGttggggaacaaaaaaaaaaacataaataaatgagaactCCACAACAGCCAGAGATTGACGGACATGGATTTCAAGTCGTAATGGAAGTGTGTCATTGCCTTGCTGTTGCCTCTTGTCTGTTACAGTCAGGaatgttttaatgatgatgTAGCAGCATAGCAAGTAAAAGCTGCTGAAACCGCACACCTTCTCTTTTTCGTCCCTGCTCCAGTGAATTTATTCCTGTTGTctaaaggtttttatttgtttagttttttaagcaATCTGTTAACTTCAAATGGAATGGCTGCCTTTGGGACTGTGGGGAGTAAAGCACTCAATCTGTCTGAAGATGCAGGTCCTGGAACAGTGAGAACGTTGGTTCTGGTTAACATCCACGTGCAATCCACAGGTTCACACAACCAGCTGTTCACATTGCTTTCATGCCTTCTGGCTATTACcattcacttttctttcttatgcttcacattcatgttttttgcGGAAAAACTGCCTTGTGTTCTGAAAAGATTCGGCGGTCATTTGTTGCGGATGGAAAAAACATAAACCGATGCCAAAAGTTCCAACATCCGACATCTCAAAACCCAGACGAAGAAGGTGATACTGTATCTGGAGCAGCAGAACAATGCCCACAGTGTCACGCAAGATCTCCTGCTGAGCGGCGGTTTAAATCACAGCCAGTGAGGTTGGACTTGTACAACCTGGATCCTGAAACGGCAATATGAAGGAAATTTGAAGCCAATGGGGTTCCCTCTATCGTTCTGTGTTGTAATCCAGCGTCATCACAGTGCTTTTCCCGATTCTGCTGAAACGTCTGAATGTTTGTTGAATGcgcccacccacc

Function

GO: NA

KEGG:

id description
K12331 ARHGEF11; Rho guanine nucleotide exchange factor 11

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012019 True 8926 mRNA 0.50 40 8805101 8839751

Neighbor

gene id symbol gene type direction distance location
AMCG00012014 NA coding upstream 74160 8726823 ~ 8730941 (+)
AMCG00012015 NA coding upstream 106654 8678904 ~ 8698447 (+)
AMCG00012016 NA coding upstream 134277 8670489 ~ 8670824 (+)
AMCG00012011 NA coding upstream 203225 8595016 ~ 8601876 (+)
AMCG00012010 NA coding upstream 217120 8587130 ~ 8587981 (+)
AMCG00012023 NA coding downstream 8575 8848326 ~ 8866791 (+)
AMCG00012022 NA coding downstream 43878 8883629 ~ 8885897 (+)
AMCG00012024 NA coding downstream 62545 8902296 ~ 8910971 (+)
AMCG00012021 NA coding downstream 82157 8921908 ~ 8928713 (+)
AMCG00012025 NA coding downstream 99667 8939418 ~ 8951857 (+)
G134068 NA non-coding upstream 2223 8802523 ~ 8802878 (+)
G134035 NA non-coding upstream 101133 8703749 ~ 8703968 (+)
G134034 NA non-coding upstream 102503 8702349 ~ 8702598 (+)
G134033 NA non-coding upstream 104483 8699411 ~ 8700618 (+)
G134019 NA non-coding upstream 177918 8624218 ~ 8627183 (+)
G134084 NA non-coding downstream 48966 8888717 ~ 8888946 (+)
G134141 NA non-coding downstream 354811 9194562 ~ 9195917 (+)
G134222 NA non-coding downstream 561703 9401454 ~ 9414917 (+)
G134236 NA non-coding downstream 694563 9534314 ~ 9538974 (+)
G134259 NA non-coding downstream 727529 9567280 ~ 9571718 (+)
G133974 NA other upstream 241887 8561042 ~ 8563214 (+)
AMCG00012008 NA other upstream 284453 8510011 ~ 8520648 (+)
AMCG00012006 NA other upstream 408060 8378333 ~ 8397041 (+)
G133822 NA other upstream 750080 8052124 ~ 8055021 (+)
AMCG00011993 NA other upstream 767420 8028063 ~ 8037681 (+)
AMCG00012043 NA other downstream 440237 9279988 ~ 9309931 (+)
G134291 NA other downstream 811598 9651349 ~ 9653234 (+)
G134295 NA other downstream 816606 9656357 ~ 9656727 (+)
G134338 NA other downstream 1013139 9852890 ~ 9867143 (+)
G134340 NA other downstream 1096175 9935926 ~ 9936411 (+)

Expression


Co-expression Network