AMCG00012035


Basic Information

Item Value
gene id AMCG00012035
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 9168918 ~ 9177896 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012035
GGGCAACTTGACAAGATGGCGGCGGCAGCGGACGAGCATGATAATGAGCTGGACGACTTGTTAGACAGTGCTTTGGGTGATTTTGAGAAGACCAAGCCCCCCGCAGCAGCCCCCAGCTCTGAGGGCAGCTCGGCTGCAGCGTCGCCCAATGCCCCCGGCACCAAGGAGAAGCCGCCTCCTTTGCTGGAGGACAACCAGTTCTTTGAGTCTCTGTTCGAGGGCGAGTTGGCCAACCAAGCGCGCGAGGAGTTCGACAAGGCAATGAAGGAGCTGGCGCAGGAGGAGCCGCATCTGGTGGAGCAGTTTCACAAGCTTTCCGAGGCGGCCGGCAAAGTCGGAACGGACGCAGATTCACAGAAGGAGTTCACTTCCTGTCTGAAGGATACTCTCAGCGGATTGGCTAAGAATGCCGATGACTTGCAGAACTCTGGATTGGCCGGTGAAGACCTCGCCAAGGCTCTAGAAGGCCTGGGATTGGAGGAGGGCGGTGAAGGGGGTGGCGACGATGCCAACATTCTCCCCATCATGCAGTCCATTATGCAGAACCTGTTGTCCAAGGAGGTGCTGTACCCCTCCCTCAAAGAGATCACGGATAAGCAGCACAGGCTGATGGGAGAGATCTGCCAGCAGTTCGAGCGAGACGGCGATCAGGGATGCTTCGAGAACGTGCTGGAGCTGATGCAACAGCCTCCTGGCATGAACTTTGATCTGGAGTCCCTCAACCTCCCGGGATCTTCAGCAGGGGGCGAGCAGTGCACCATCATGTGATCCCTACTGGACGGCCAACGAGGAACGCAAAAGTGAGGATCGGCGCCTCTTTCGATGAGCTCCTTTGGCTTGTTTGAAGGGGAAATGGTTAAAGTAGACCAGCATTAACTGTGGCCACCTTTCACAGCCGCCTTCCTTTCCCCGTGTCACATTTGCAGTTTCCTTCTATTCACCACAGTCGAATACCTCGTATGTGAAACCAGAACCCCCAGTGTGTAGTTCAGACGTGAGCAGAACCTCTTCTGTGGAGACGACCCCGAGGTGTTCCTGGGAAATGGAGTTCTCGAGAGTCtcgttttgtgtgttttgcgtGGCAGGCCTCAAGTCACCCACATTTCCCAACATCCTGCCACGTAGCACGGGCTTCTGGGAGCTGGAGTCCCTTTAAGTCTCCCTGCATCGACACAAGAGATTTAGGTCACGGAAATCTGGAAAACACTGCAGCggttttatatgcattttattagaTCGGATGTGACACGATACAGTTATCAGAGTCCGTAAAGGCATCTGAAAACATAGTTAATACAGAGGGGTGATTGCCAGGACAGGTTTATAAACAATGGGACTTCTCTATCCTCACTACTCTTGGGGTGAGGCAGTGAGGCATTAGGACTTTACATTGAGCTATATGGGCAGTTCTGTATTTTTGAATTTGGGGGGGGGAGTTTAACAATTCTGTATTCAGGAACACTAAAGTACTAAGGGCCCTATGAACTGTTAGTTTGCCACTCTAGCTATTCTAATGTGTAGGAGCTGTGTGAGATTTGATCTGATATAGGCTACAGTTTTTCATCTAATGGTTtggtttttttattattattacacacaaCACTAGACTTGgcgattgatttatttatctttttgatCTGGGGAAATCTATTTTTGCAGTGTAATTTTATAATTGTgcctaaaatgaaataattacaaacaaGTGTTTaatcctgtttaaaaaaaaaaaaaagttaatgttcTGCTGTTAACTATTTGGAATAGTAAACAGCGGAACTGGGTCACTGTCAGAATCATTAATGGTGAcctgttttaaaaagtaaaacaacagCATCGAGGGCAGGAACAGTCAGACTACTTTGGTGTTCATGGAAAGATCTTGGTGTCAGCTGAAACCAGTTCAGGCTTGCATGTGTGGTAACTAATGCTCATAACGGCTAGTTGAGTTTAGGGAGATTGATTTAACCCTTTACCTTAGACTTTAATTTAGCACTGTGTACTACTTTATCAGTAGATTAAAGCACttcatttttgttgtggttttcagCTAAAAAGTTTTTAAGTTGCCTCTTAAACTGCACTGCCTTACATGTTTAATGACATGCTTTCTAAAATGTGGACAATGAATGATTTAGCGAGACATTTGTAAGGATTTATACAGAAGGATCCTGTAACTTTTGTAttccaaaacattaaatattgtttcagtGCTTTATCATATATGCTAGGAAGATTTAAAACACCGAAGTGAGTTTCCCGTGGTCAAGTGGTCAGAGCCAACGGTGCCCAAAAGTATTTCCGCAATGTGACAAAGGAAATAGACGGTGTAACTGAAAAGTTTCAAACAATTCCTTGAGTCTTAAATGGCTCTAAGAAACTTAAGATCCTGtagtcttttctgtttttttttttttttttaatttgtattctttgGAATTGATGTAAAGTTTAGCTCTGTAGCGAGGACCCATTGTATGCACTTCTGACTGGTTATCCCAACACTGTAAGAATTGCTCAAATAAATGGTTTACAATGCAGTGCTGGAACATAGTGTCCCATTTAATTTCTTGTGTTCCGGAACACTCCAAAGAGGGGAAATCAAACTCTTTTTTT

Function

GO: NA

KEGG:

id description
K13337 PEX19; peroxin-19

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012035 True 2613 mRNA 0.45 7 9168918 9177896

Neighbor

gene id symbol gene type direction distance location
AMCG00012036 NA coding upstream 4271 9160818 ~ 9164647 (+)
AMCG00012037 NA coding upstream 23384 9125101 ~ 9145534 (+)
AMCG00012038 NA coding upstream 43865 9114640 ~ 9125053 (+)
AMCG00012029 NA coding upstream 91160 9076379 ~ 9077758 (+)
AMCG00012031 NA coding upstream 105313 9042798 ~ 9063605 (+)
AMCG00012042 NA coding downstream 18101 9195997 ~ 9203737 (+)
AMCG00012041 vangl2,LOC107706024,LOC107686095,LOC107702770,LOC107707319 coding downstream 45331 9223227 ~ 9237276 (+)
AMCG00012044 NA coding downstream 63793 9241689 ~ 9256200 (+)
AMCG00012046 NA coding downstream 87113 9265009 ~ 9265814 (+)
AMCG00012047 NA coding downstream 94178 9272074 ~ 9273616 (+)
G134084 NA non-coding upstream 279972 8888717 ~ 8888946 (+)
G134068 NA non-coding upstream 366040 8802523 ~ 8802878 (+)
G134035 NA non-coding upstream 464950 8703749 ~ 8703968 (+)
G134034 NA non-coding upstream 466320 8702349 ~ 8702598 (+)
G134033 NA non-coding upstream 468300 8699411 ~ 8700618 (+)
G134141 NA non-coding downstream 16666 9194562 ~ 9195917 (+)
G134222 NA non-coding downstream 223558 9401454 ~ 9414917 (+)
G134236 NA non-coding downstream 356418 9534314 ~ 9538974 (+)
G134259 NA non-coding downstream 389384 9567280 ~ 9571718 (+)
G134284 NA non-coding downstream 468130 9646026 ~ 9646444 (+)
G133974 NA other upstream 605704 8561042 ~ 8563214 (+)
AMCG00012008 NA other upstream 648270 8510011 ~ 8520648 (+)
AMCG00012006 NA other upstream 771877 8378333 ~ 8397041 (+)
G133822 NA other upstream 1113897 8052124 ~ 8055021 (+)
AMCG00011993 NA other upstream 1131237 8028063 ~ 8037681 (+)
AMCG00012043 NA other downstream 102092 9279988 ~ 9309931 (+)
G134291 NA other downstream 473453 9651349 ~ 9653234 (+)
G134295 NA other downstream 478461 9656357 ~ 9656727 (+)
G134338 NA other downstream 674994 9852890 ~ 9867143 (+)
G134340 NA other downstream 758030 9935926 ~ 9936411 (+)

Expression


Co-expression Network