AMCG00012037


Basic Information

Item Value
gene id AMCG00012037
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 9125101 ~ 9145534 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012037
ATGTCGGCATTATCTGCTCTGGTGAGTCAGTTACTGTTACTGTCCTCTGGGAATTTCCCTAATATTGGATCTCAGACTGGGGAACTTAAAAATCCGTGTGATGGAAAAGTGGAAGTGTTGAAGAATGGACAGTGGGGGAGAGTTTGTCATGATGGTTGGATGGTTTACAAAGGGAGAGTTGTATGTGATCAGCTAAACTGTGGAGCTTATATGGGTTCTTCCTATGATTCTTCTGATTCCAGTCCCATTGACCTGAGTGGGGTTAAATGTAATGGAACACAGCCATCCCTACTACACTGCACTTCTGACCTGCAGGTGTCAAATTGCACTCAAGGAACCACTAGAGTACAATGTTCCGGAGACACAGTGCGGCTCTCTCGGTGGGTTTGCAGAGGGCGATTGGAGGTGAAACATGGGGGCACCTATAAAACAGTGTGTCCTCAGTCTGTGGACTCCAGAGATACAGATGTGGTCTGTAGAGAGCTAGGCTGTGGAGTGTCTGGAGCTGTGCTGGGGGGTGCTGTGTTCGGACAGGGGACTGGGCCCATATGGGCCGATGAGATTCAGTATGGAGGTGATGAGGGAAGTcctactgtaaaaataaaccagaacaactgcacacacactgatgaCtttacaCACTGGCATATTGTAATATTGGTGACTATTTTCTGTCTGTCCACTGTCTCCACTGTCTGCTGTTTAGGCTACACTGATTTCAGGCTGGTGAACGGTCCCGACCGCTGCTCAGGCAGAGTGGAGATGAAGTACGGTGGTCAGTGGGGGACAGTCTGTGACCATGGCTGGGATCTTCGGGACGCCACAGTTCTCTGCCAGCAGCTGCAGTGTGGCCATGCTGAGGCAGTCCTGGGCCCAGACAGATTTGGACAGGGAAACAAATCtgtgttcaattatatttttgactgTGAGGGCACTGAGACCACGCTGAGACAGTGCCCCATCTCCCCATGGACTCACAGCACCTGCATTAATAGGAGCGATCTGGGCGTGGTCTGTTCCAAGTTCAAGCAGCTCAGGCTGGTGAGTGAGCAGTTTGAATGTGCCGGACAAGTGGAGGTCTTTTATAACGGCACCTGGGGCAGTGTCTGCTCCAACCGCATGAGGGCTCACACTGCCACACTCATATGTCAGCAGCTCAGCTGTGGAGACAGTGTTTCCTTAGATAATGCTAACCATGTCCCGGGTCTGAAATGGTTGGATAACATTGAATGTACAAGGCACCACACATCTCTGTGGCAGTGTCCTTCCTCACCGTGGGGAGACGACAGCAACTGTGATGACAGAGATGTAGCTGAAATCATTTGCAGagAGCCCCCGAAGCCCAGGCCCAggcctcttcctcctcctcctcctcctcaggcTCAGCCAGGCCAGTCCAATCTGCTGATTGTCTGCGCCACTCTGGGGGCTCTGGTGTTCATGGCGGCCATCCTGGCTCTTGTGCAGATGCTGCGCTACAGAGCGCTGAAGAGAGAGTTCGCTCAGCTGGAGACGACCTCCGACCCCCTCCAGGACGGCCTCTATGAGGAGATCGACCACAAGCCCCACAGACAGGGAACGTACAGCCAGTACAGGGCAGCCAGTCTACCTGCCAGTGAGGATGACTATGACGATGTGAAAGAGGAGGAAGACGCCTCAGTACCAGaaataaagaaagagccCCCAGGAAAATCCTCTCCAGACTTGGACTACCATGGATATGAAGAGGTGGAAGAGCCTGAAtcatAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012037 True 1749 mRNA 0.52 10 9125101 9145534

Neighbor

gene id symbol gene type direction distance location
AMCG00012038 NA coding upstream 48 9114640 ~ 9125053 (+)
AMCG00012029 NA coding upstream 47343 9076379 ~ 9077758 (+)
AMCG00012031 NA coding upstream 61496 9042798 ~ 9063605 (+)
AMCG00012028 NA coding upstream 102432 9022023 ~ 9022669 (+)
AMCG00012032 NA coding upstream 129927 8990396 ~ 8995174 (+)
AMCG00012036 NA coding downstream 15284 9160818 ~ 9164647 (+)
AMCG00012035 NA coding downstream 23384 9168918 ~ 9177896 (+)
AMCG00012042 NA coding downstream 50463 9195997 ~ 9203737 (+)
AMCG00012041 vangl2,LOC107706024,LOC107686095,LOC107702770,LOC107707319 coding downstream 77693 9223227 ~ 9237276 (+)
AMCG00012044 NA coding downstream 96155 9241689 ~ 9256200 (+)
G134084 NA non-coding upstream 236155 8888717 ~ 8888946 (+)
G134068 NA non-coding upstream 322223 8802523 ~ 8802878 (+)
G134035 NA non-coding upstream 421133 8703749 ~ 8703968 (+)
G134034 NA non-coding upstream 422503 8702349 ~ 8702598 (+)
G134033 NA non-coding upstream 424483 8699411 ~ 8700618 (+)
G134141 NA non-coding downstream 49028 9194562 ~ 9195917 (+)
G134222 NA non-coding downstream 255920 9401454 ~ 9414917 (+)
G134236 NA non-coding downstream 388780 9534314 ~ 9538974 (+)
G134259 NA non-coding downstream 421746 9567280 ~ 9571718 (+)
G134284 NA non-coding downstream 500492 9646026 ~ 9646444 (+)
G133974 NA other upstream 561887 8561042 ~ 8563214 (+)
AMCG00012008 NA other upstream 604453 8510011 ~ 8520648 (+)
AMCG00012006 NA other upstream 728060 8378333 ~ 8397041 (+)
G133822 NA other upstream 1070080 8052124 ~ 8055021 (+)
AMCG00011993 NA other upstream 1087420 8028063 ~ 8037681 (+)
AMCG00012043 NA other downstream 134454 9279988 ~ 9309931 (+)
G134291 NA other downstream 505815 9651349 ~ 9653234 (+)
G134295 NA other downstream 510823 9656357 ~ 9656727 (+)
G134338 NA other downstream 707356 9852890 ~ 9867143 (+)
G134340 NA other downstream 790392 9935926 ~ 9936411 (+)

Expression


Co-expression Network