AMCG00012038


Basic Information

Item Value
gene id AMCG00012038
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 9114640 ~ 9125053 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012038
atgaccaCCTACCTGGTCTCTATGATCGCGGACAAACTCGCTATTCATCTAGAGGAGTCAGACATTGAAAGGGCTCACAGAGTCAGGCGCAAAGAGAAAGCTGGCAGTCACCcctgcatgtctgtgtttaAACTACACAATTTCCAGAAGAAGATAAACATCCTTTGGAAAGCCTTGCGATCAGCTGAGGAGCTCCAGATACAGGACAGCATTTCAAAGACAAAAGCTTTATTAAGGTCCCACTGTGTGGACGACACTATTCTGTATTTCCATTCTTCTGTGTTTACCTTACTAGGCTGCCAACATCTAAGACTGGTGGATCATTTCAATCGCTGTGAGGGAAGAGTGGAGGTTTATAAGAATGGACAGTGGGACAAAGTCTGTGCTACTAAATGGGGTATTAACAATGGTAAAGTTGTGTGTAATGAGCTCAACTGTGGGACTTATGTATCATCTTATGATTACCCTACAAAGTCAGGACCCATCCTGTTGAGTGGGGTTGAGTGCAGTGGAACAGAGTCGTTTCTATTGGACTGCAAATCTGACCCCCAGGTCTCAACATCCTGCACTCATGATAAAGACTTCAGAGTGACTTGTTCAGGATGGAAAGTGCGTCTTACAGTGAATCGAAGTCAGGGGCGGTTGGAGGTGAACCATGGCGAGAGCTGGAGAACAGTGTGCTCCCAGTCTATTGACTCCACAGACGCAGACGTGGTCTGCAGAGAGCTGAGCTGTGGATATTCAAAGGCTGTGCTGAGAGGAGCCCACTTTGGAGAGGGGACTGTGCCCATATGGGCTGATGAGATCCAGTGTCAGGCAATGAGAGAAACTGTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012038 True 837 mRNA 0.47 3 9114640 9125053

Neighbor

gene id symbol gene type direction distance location
AMCG00012029 NA coding upstream 36882 9076379 ~ 9077758 (+)
AMCG00012031 NA coding upstream 51035 9042798 ~ 9063605 (+)
AMCG00012028 NA coding upstream 91971 9022023 ~ 9022669 (+)
AMCG00012032 NA coding upstream 119466 8990396 ~ 8995174 (+)
AMCG00012030 NA coding upstream 124523 8970106 ~ 8990117 (+)
AMCG00012037 NA coding downstream 48 9125101 ~ 9145534 (+)
AMCG00012036 NA coding downstream 35765 9160818 ~ 9164647 (+)
AMCG00012035 NA coding downstream 43865 9168918 ~ 9177896 (+)
AMCG00012042 NA coding downstream 70944 9195997 ~ 9203737 (+)
AMCG00012041 vangl2,LOC107706024,LOC107686095,LOC107702770,LOC107707319 coding downstream 98174 9223227 ~ 9237276 (+)
G134084 NA non-coding upstream 225694 8888717 ~ 8888946 (+)
G134068 NA non-coding upstream 311762 8802523 ~ 8802878 (+)
G134035 NA non-coding upstream 410672 8703749 ~ 8703968 (+)
G134034 NA non-coding upstream 412042 8702349 ~ 8702598 (+)
G134033 NA non-coding upstream 414022 8699411 ~ 8700618 (+)
G134141 NA non-coding downstream 69509 9194562 ~ 9195917 (+)
G134222 NA non-coding downstream 276401 9401454 ~ 9414917 (+)
G134236 NA non-coding downstream 409261 9534314 ~ 9538974 (+)
G134259 NA non-coding downstream 442227 9567280 ~ 9571718 (+)
G134284 NA non-coding downstream 520973 9646026 ~ 9646444 (+)
G133974 NA other upstream 551426 8561042 ~ 8563214 (+)
AMCG00012008 NA other upstream 593992 8510011 ~ 8520648 (+)
AMCG00012006 NA other upstream 717599 8378333 ~ 8397041 (+)
G133822 NA other upstream 1059619 8052124 ~ 8055021 (+)
AMCG00011993 NA other upstream 1076959 8028063 ~ 8037681 (+)
AMCG00012043 NA other downstream 154935 9279988 ~ 9309931 (+)
G134291 NA other downstream 526296 9651349 ~ 9653234 (+)
G134295 NA other downstream 531304 9656357 ~ 9656727 (+)
G134338 NA other downstream 727837 9852890 ~ 9867143 (+)
G134340 NA other downstream 810873 9935926 ~ 9936411 (+)

Expression


Co-expression Network