AMCG00012048


Basic Information

Item Value
gene id AMCG00012048
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 9305545 ~ 9307807 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012048
tcactccctctctcacacacacatgtgaacatgcacacacacatactgggTGTGATATGAGTGttgaaacactgaaatgaaCTGAAAACCCACAGGAAATGCAAGTGGTTTCTGGTAATACGTCTTGTATAGATGGAAAGACAACTAGAGCATTAGACATGTAAAATCACCCAGCCCCTAAAACATGAAAAGAGTACAACATTTTGTGTGATCTGCATTATACCACATAATGACAGGGTTTCAATGTCTCCCTGATTTCAGACAGACATTGGCAATCTGTCTGCTTCTATATGCTCTTCAGGGTCCAATCAGAGGCTCCCCTCCAGTGCTGGTCAATGGAATCCTGGGAGAGTCGGTTGTCCTGCCTTCAGGGCTCGACGAGAGACTGTACAGCTCAGTCAGTCCAGACCTGATGCAATGGGAAAGGGATGGGAGGACTGTCatccaattaataaataataagacagTAGAGACTAATTTATTCAGAGGTAGAGTCTCTTTGAGCACAGAAGACGGGTCTCTGACCATCAGTTCTCTGAAAGCTGAAGACAGAGGAAATTACATGTTCAGTGGAGGTGGATCTTCAGGCCAGTTCCCTGGAAAAAGTGTTACTCTTCATGTGTATGAGAGGATCAGATCGGTGCAAATACAATCACAGAGGAGCTACGGGACAGACAATAAAACCTGCCACTTGACTTTAAACTGCACTGTGACGGGCGGCAGCCAGGTTGATCTCATTTGGCTGAAAGGCAAGAACAAGAATCCAGAAGAAACAAAGCAATCGGTTCTGCAGTTGACTGTTAAACCTACAGATGATGATTATTCCTACACCTGTGTCGCCTCCAATCCTGTCAGCAATCAGTCTGATACCATTGAGGGTAATGAGTGCTACACACAG

Function

GO: NA

KEGG:

id description
K06570 LY9, CD229; lymphocyte antigen 9

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012048 True 898 mRNA 0.45 3 9305545 9307807

Neighbor

gene id symbol gene type direction distance location
AMCG00012047 NA coding upstream 31929 9272074 ~ 9273616 (+)
AMCG00012046 NA coding upstream 39731 9265009 ~ 9265814 (+)
AMCG00012044 NA coding upstream 49345 9241689 ~ 9256200 (+)
AMCG00012041 vangl2,LOC107706024,LOC107686095,LOC107702770,LOC107707319 coding upstream 68269 9223227 ~ 9237276 (+)
AMCG00012042 NA coding upstream 101808 9195997 ~ 9203737 (+)
AMCG00012049 NA coding downstream 3615 9311422 ~ 9318636 (+)
AMCG00012052 NA coding downstream 130520 9438327 ~ 9440627 (+)
AMCG00012055 NA coding downstream 200934 9508741 ~ 9534241 (+)
AMCG00012056 NA coding downstream 234207 9542014 ~ 9544985 (+)
AMCG00012067 NA coding downstream 327689 9635496 ~ 9643331 (+)
G134141 NA non-coding upstream 109628 9194562 ~ 9195917 (+)
G134084 NA non-coding upstream 416599 8888717 ~ 8888946 (+)
G134068 NA non-coding upstream 502667 8802523 ~ 8802878 (+)
G134035 NA non-coding upstream 601577 8703749 ~ 8703968 (+)
G134034 NA non-coding upstream 602947 8702349 ~ 8702598 (+)
G134222 NA non-coding downstream 93647 9401454 ~ 9414917 (+)
G134236 NA non-coding downstream 226507 9534314 ~ 9538974 (+)
G134259 NA non-coding downstream 259473 9567280 ~ 9571718 (+)
G134284 NA non-coding downstream 338219 9646026 ~ 9646444 (+)
G134292 eif3f,LOC105905622 non-coding downstream 346045 9653852 ~ 9654600 (+)
G133974 NA other upstream 742331 8561042 ~ 8563214 (+)
AMCG00012008 NA other upstream 784897 8510011 ~ 8520648 (+)
AMCG00012006 NA other upstream 908504 8378333 ~ 8397041 (+)
G133822 NA other upstream 1250524 8052124 ~ 8055021 (+)
AMCG00011993 NA other upstream 1267864 8028063 ~ 8037681 (+)
G134291 NA other downstream 343542 9651349 ~ 9653234 (+)
G134295 NA other downstream 348550 9656357 ~ 9656727 (+)
G134338 NA other downstream 545083 9852890 ~ 9867143 (+)
G134340 NA other downstream 628119 9935926 ~ 9936411 (+)
G134357 NA other downstream 726379 10034186 ~ 10034693 (+)

Expression


Co-expression Network