AMCG00012050


Basic Information

Item Value
gene id AMCG00012050
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 9321611 ~ 9333991 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012050
GCGCAGACCCCAAGCCACAGGCTTCCACCTTCAACAGAGAGACGCAGATGCACAAATGAGCTGCAGATGGCTGCATTGCTGGTTCTGTCTTTGTCAGCCCACGGGAAATGAGGGAAGTCGAGGCTATCATCGATTAGaagcaatataaataataattctaatctatttaaaataaactgcagcttGATACAAAAAAGGGAACTTACAAACTCATGTGGTACATGACTCAGTCAGCAAAAAAATATTGAGTTTTACAAAACCAACCAGAAAGGAAGCAACtctacttttctttcttttctttttttatctgtcTTGAAAATAGTAGAAATAGATAACGGAGTTCCTGACATTTACAGTGATCCACAAAAATGTTTGGGATTCAGGAAGGCCACTATTTCACTCCTGTTTTCCAGGTGTGTCTGCTGTTGTATGCTCTTCAGGGTCCAATCAGAGGCTCCCCTCCAGTGCTGGTCAATGGAATCCTGGGAGAGTCGGTTGTCCTGCCTTCAGGGCTCGACGAGAGACAGTACAGCTCAGTCAGTCCAGACCTGGTGCAATGGGAAAGGGATGGGAAGACTGTCATccaattcataaataataagacAGTAGAGACTAATTTATCCAGAGGTAGAGTTTCTTTGAGCACAGAAGACGGGTCTCTGACCATCAGTTCTCTGAAAGCTGAAGACAGAGGAAATTACATGTTCAGTGGAGGTGGATCATCAGAGCAGTTTCCTGGAAAAAATGTTACTCTTCATGTGTATGAGAGGATCAGATCGGTGCAAATACAATCACAGCGGAGCTACGGGACAGACAACAAAACCTGCCACTTGACTTTAAACTGCACTGTGACGGGCGGCAGCCAGGTTGATCTAATTTGGCTGAAAGGCAAGAACAAGAATCCAGAAGAAACAAAGCAATCGGTTCTGCAGTCGACTGTTAAACCTACAGATGATGATTATTCCTACACCTGTGTCGCCTCCAATCCTGTCAGCAATCAGTCTGATACCATTGAGGGTAATGAGTGCTACACACAGGATCCAAATCATAAAATTGAAACAATCtacattgctgctgctgctgcagctggtgGATTcctctttttggttttgttactCATCACACTGGTTCATTGCTGCTGTAAAAATAGCAAAAAAGAAGTAGAAGATCCAGCTCAAACTCTTTATGCTGAAATTGATAACATACATCATAGAAGAAATAAGtCATCCTCTGATGTATATAACTTACCACGTGAACTTACCACGTGTTATGATGTTGTGAAGGAGAGAAAACATGGACCCCCCAGTCAGACATTGTACGACACAGTGAAGTTTGATTGTAAGGAGGGTTTCTCACAGTACCAAGATGTCAACTGAACATCACCCAGGATGATTTTTCTTCAGACAGAAACATGAATATTTTACTGTGTTAAGATACTGTGCCCTATTAATTTATGAAGCCCATGGAGCCTTTCTGGTAAAGATTAATTCTGTTTCAGGATTGagatgaataaaaacaataacaataatccaGTGGCACTCTACTGCCATAATAAAAACAGGAGATTTTAGCACAggatatgtattgtttttttctgggaCATATCATAAGCTTTGTCTGAGGGGAACACTGGGAACAAGATGGGATTGCAAGGGTTTCTGCccaatatacacattttcttgcaCATCTCTAAAATAATTTCCAGTTTTGACTGGGGAGTATTTGGTGAAATTGATTTAATGTGAACTGGCTAACATAAATATGtctaaaaaaaaagtaatgcagtgttctctgttttttccccttcaatGCTCTATGTGTGTCCTAAAGCAATCTACATGTTCAGTAGTTTGATGTATTTTGCCTAATTTTGGAGTAACCATCTGGAAGTTATGAATCTTGTGTTGCTACAGAAGAGGACTGACTTAATCTATGTCATTTTgtgaatgtaatatatatatatatatata

Function

GO: NA

KEGG:

id description
K06570 LY9, CD229; lymphocyte antigen 9

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012050 True 1970 mRNA 0.40 7 9321611 9333991

Neighbor

gene id symbol gene type direction distance location
AMCG00012051 NA coding downstream 24037 9291483 ~ 9297574 (-)
AMCG00012045 copa,LOC106600386,LOC102794619 coding downstream 125902 9178467 ~ 9195709 (-)
AMCG00012039 NA coding downstream 172216 9146127 ~ 9149395 (-)
AMCG00012040 NA coding downstream 203289 9088852 ~ 9118322 (-)
AMCG00012034 NA coding downstream 249098 9062571 ~ 9072513 (-)
AMCG00012054 NA coding upstream 27037 9361028 ~ 9372681 (-)
AMCG00012053 NA coding upstream 50435 9384426 ~ 9398409 (-)
AMCG00012068 NA coding upstream 218570 9552561 ~ 9553607 (-)
AMCG00012066 NA coding upstream 221202 9555193 ~ 9556954 (-)
AMCG00012064 NA coding upstream 223506 9557497 ~ 9560627 (-)
G134143 NA non-coding downstream 130319 9154436 ~ 9191292 (-)
G134069 NA non-coding downstream 518625 8802407 ~ 8802986 (-)
G133997 NA non-coding downstream 837954 8430988 ~ 8483657 (-)
G133915 NA non-coding downstream 1132918 8188289 ~ 8188693 (-)
G133891 NA non-coding downstream 1269366 8004018 ~ 8052245 (-)
G134226 NA non-coding upstream 80325 9414316 ~ 9416458 (-)
G134298 NA non-coding upstream 322365 9656356 ~ 9656645 (-)
G134396 NA non-coding upstream 458319 9792310 ~ 9799446 (-)
G134402 NA non-coding upstream 518910 9852901 ~ 10347725 (-)
G134405 NA non-coding upstream 602109 9936100 ~ 9946489 (-)
G134119 NA other downstream 176316 9140824 ~ 9145295 (-)
G134036 NA other downstream 619970 8699411 ~ 8701641 (-)
G134005 NA other downstream 756347 8489200 ~ 8565264 (-)
AMCG00011995 NA other downstream 1261735 8047229 ~ 8059876 (-)
AMCG00011974 NA other downstream 1645380 7651556 ~ 7676231 (-)
G134244 NA other upstream 201277 9535268 ~ 9538892 (-)
AMCG00012058 NA other upstream 278488 9612479 ~ 9626126 (-)
G134395 NA other upstream 456850 9790841 ~ 9791348 (-)
G134397 NA other upstream 475807 9809798 ~ 10244924 (-)
G134400 NA other upstream 513550 9847541 ~ 9848106 (-)

Expression


Co-expression Network