AMCG00012052


Basic Information

Item Value
gene id AMCG00012052
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 9438327 ~ 9440627 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012052
ATGGCACAGTCACAGCAGGAGCAGACCTGGgttttaaagggaaaaacaaacatctctTTTGTTGCAGCTATGCCTGGGGCAGGAGAGCAGGTTTATGGAGAAAAGGGGAAATCCATCACACTAGATGTACCCAAGCAATATCTGAAGGACATGAAGGACTTGACTTGGCTCTTAAAGAAATCTAagattgtaattgtaaaatactcCAATAACTTCATGGCTACACCATACAAATCGAGGGTCAGCTTCCATAGAGAAAACTGTTCCTTGACATTGAAAAACCTGACAGTCAAAGATAATGGTGAGTACGAGGCCATTGTGACCGACTCAAGAGGAAAGGAGAATCCTCAAATACGTTACAAGCTCGAGGTACAAGCTCCGGTTTCCTCGCTCTCCATCCAGGTCAATAAGGTGCGCACACCTGACGGGGGCTGCAATTTCACTCTGAAGTGCTCCGCAGAGAAAGGGACCCACGTGTCATTCCACTGGGCCGAGGAGGATACTAAGAAAACattacacagtgacacactggaGCTTACTCGGGACTCTGACTACAGCGGGAACAATTCTTTCACATGTTTCGCACAAAATAATGTCAGCCATGCCTCGGTTACTGCAAAGATGGTTGAGTGTGCCATGCCAAGTGCAGGTATGGAGACAACCATTGGGGTGACCACAGCTTTGCTCCTGATTCTGATTTTGACGACTGCGGTTGTTTTGATCTTCTGGCGAAAGAAGTGCACCAAGAACCCCGCAGGGGCCCTCTACGGGAACGTGAGCATAGAAAAGAGGTGCAACGAGACCTCTGTGGTCACGCTGTACGACACTGTGAACCCGAGAATCCAAACGATGGAACTGGAGCCGGGAGTGACCACTGTGTACGCCACTGCAACTTCCGTCAGGCCTTCAGAGCATGCCAAGGAATGTTACTCAGTGGTCAACCACAACGCCCAAGTTCCACTTACTGAAGCAGAGACCATCTACGAGGTGGTGCAGTCTCCCGCCCCCGAGATGGGTTACAAACGACTGTCTTGACTTAGTGCGGCAGTAAGAACAAGTTCTGGGATACGTCCTGGGATATGCCGTTCCTCATTGCTACAGACATTTGTCTGACTTGGACTGCAACCAAACTGAAATAAGCCCGGCCACAGTGCATACCTCAGTTGCAGCACTGCTGGAACCAGTGACCCGGTTCATTGAGCTGTGGAGAGCCTCCACTCGTTCGAAGGCTGAGCTGTTATGAGTCAAGATAAAGCTGGTAAAGCTTTAGAGGTAAAGCACGATTATCTGAGCATCACCAGAGTTAGGCGTATGTACAGTCAGCCAGGGTTTACCTGAGCTTATTGGGCAGAAACAAGCTCAACCTGGGCCTATGAATCTGCAGTGATGTCAGTCAGAGCACTGTCAATCCGCTGTCCACTGCCTGAGTGCAGCTGTTTGCACCGTAGGTTGCTGAAGAAGCAGGTGTGTATGTTGTCTTCATCTCTCCTCCTTGCTGGTACAAGGAGTTCTTGATATTGATTAACAAAATCTGATCACAAGATAAACtcacacagtttgttttttagttttttctcaacgcatttatttgtattttcactgAGTTTCAGTTTCCTCTTCATTCTCTATTACACGTGTTGATCATGTATTGGGCATGccgtggtttgtttttttctgtacataATCCAGAGCTCCTTTCCCACCACATTGTACTTTGGGTGATAACAAAAAGTTGCCATTATGTCATTAATATGTACAATAGCATAAATCTATCATATTAAAAAGCTAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012052 True 1790 mRNA 0.47 4 9438327 9440627

Neighbor

gene id symbol gene type direction distance location
AMCG00012049 NA coding upstream 119691 9311422 ~ 9318636 (+)
AMCG00012048 NA coding upstream 130520 9305545 ~ 9307807 (+)
AMCG00012047 NA coding upstream 164711 9272074 ~ 9273616 (+)
AMCG00012046 NA coding upstream 172513 9265009 ~ 9265814 (+)
AMCG00012044 NA coding upstream 182127 9241689 ~ 9256200 (+)
AMCG00012055 NA coding downstream 68114 9508741 ~ 9534241 (+)
AMCG00012056 NA coding downstream 101387 9542014 ~ 9544985 (+)
AMCG00012067 NA coding downstream 194869 9635496 ~ 9643331 (+)
AMCG00012057 LOC107713649,LOC107698496,LOC107600231,LOC106569574,LOC105905623,LOC107676327 coding downstream 219122 9659749 ~ 9673361 (+)
AMCG00012069 LOC106569594,LOC108427136 coding downstream 271595 9712222 ~ 9719197 (+)
G134222 NA non-coding upstream 23410 9401454 ~ 9414917 (+)
G134141 NA non-coding upstream 242410 9194562 ~ 9195917 (+)
G134084 NA non-coding upstream 549381 8888717 ~ 8888946 (+)
G134068 NA non-coding upstream 635449 8802523 ~ 8802878 (+)
G134035 NA non-coding upstream 734359 8703749 ~ 8703968 (+)
G134236 NA non-coding downstream 93687 9534314 ~ 9538974 (+)
G134259 NA non-coding downstream 126653 9567280 ~ 9571718 (+)
G134284 NA non-coding downstream 205399 9646026 ~ 9646444 (+)
G134292 eif3f,LOC105905622 non-coding downstream 213225 9653852 ~ 9654600 (+)
G134305 NA non-coding downstream 236151 9676778 ~ 9679102 (+)
AMCG00012043 NA other upstream 128396 9279988 ~ 9309931 (+)
G133974 NA other upstream 875113 8561042 ~ 8563214 (+)
AMCG00012008 NA other upstream 917679 8510011 ~ 8520648 (+)
AMCG00012006 NA other upstream 1041286 8378333 ~ 8397041 (+)
G133822 NA other upstream 1383306 8052124 ~ 8055021 (+)
G134291 NA other downstream 210722 9651349 ~ 9653234 (+)
G134295 NA other downstream 215730 9656357 ~ 9656727 (+)
G134338 NA other downstream 412263 9852890 ~ 9867143 (+)
G134340 NA other downstream 495299 9935926 ~ 9936411 (+)
G134357 NA other downstream 593559 10034186 ~ 10034693 (+)

Expression


Co-expression Network