AMCG00012076


Basic Information

Item Value
gene id AMCG00012076
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 9999738 ~ 10004091 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012076
ATGCCATTGAACTCCAAATCAACAATCACCTTCCTTATCGCCCAGCCAAGCACAGTGCTCTCCCTGCAGCCTCTGCATGGAGAGATATTAGAGGGAGACAGGGTTACTCTGTCCTGTGTGGTGGAGGACATGGGAATCCACTCTTCTGCTTGGCTGTATTACTGGTACAAAGACAGTCTGGACAACACAGTGCACCagagcagcaacagcagcaggtcTGGAGCCACTTACACCATCGGCTCTGCTGCTCTCACTCACACTGGCCGGTACTGGTGTCGGGCTGGGAGAGGAGAGCCACTGTTCCATTTAAATCACAGCCGAGCCGTCAGAATACAGGTGTCTGAGCTGTTCACCAAACCGGTGCTGTGGGTGCGGCCAGGGAACTCGGTCATAGAGGGGGACTCGGTCACTCTGCACTGTGATTCCCAGTTAAACAGCAAAGCCCAGGATATGAAGCTGCAGTACCATTACACAGAGGAGAGGGGGGACTGGAAAACAGTAACATCAAAGGAAACCCTGATGATCCCCATTATCAGGCTCAATCACACAGGACAGTACCAGTGTGAGGTGGAGGCGCTGCAGAAGAGCATCAGGAGATCAAGTAACTGGACAGAGGTCACAGTGGGAGAGCTTTTCCTGGGAGTCCACATCACAGCTCAGCCATCAGAGATAGTCTGGGAAGGAGAGACCCTCACCCTGCACTGTGCTGCTCAGTTAAAGAACTCAGCTCACAAACTACAATACAGATACGTGAGGGAAGGACGAGTGGTGAAGTCCAGTTGGGAGGATACATACACCATCAAAGTGAAGCAGGGGGATGAGGGGAAATACCACTGTGAGGCTGAAGCTGCAGGGAAGGGGATTTACAGCATAAGCAATGAAGTGGAGATCACTGTGACAGAGCATCCCAAACCAGCAGTGACACAGGAGCCTGTCTGGGAGAGGCTGTACTTTGGGGAGCCAGTGATCCTGAGATGTGGACTCAGTGTGGATTTCCCCAGACTGGAGTATCTCTGGTTCAAGGACAGCCTGGGAAGCCCAGTGACCAACACCAGTGACCACACcattcacagaaacacactccGAATCTCCTCGGTTCTCCGCTCTGACCGGGGGCAGTACAGGTGCCTGGTCCAGAGAGGACAGCCTCCACAGTCCACACACCCCAGTGACCCTGTGCTCCTAAACGTCTCGGatgAACCCCCCAGGGTCTGGCTGTCTCTCAGTCCGGAGTGGACAGTGCTGTTTCCTAAGGAGTCTGTTACCTTGCGCTGTGGCCTGACAGGAGACTCCAGTGCAGGACAGTATAACTGGTACAGGGCTGCAGAGGGCAAGGCAACTGAACCAGtgcagtgccagaagactaatgGTGACAATTGTTTAGTTACTTTTAAAGACAAGTCTCACAATGGACTGTACTGGTGTGAGGCCCAAACAGAGGGAGAACGGAGCGCATCTGTCCACATCAGAGTAGTGGATCACAAGGTGATCCTGCAGACCCCTCCACTGCCTCTCACTGAAGGAGACAACGTGACTCTGGTGTGTCGAGATAAGTCAACCTTCAGGAATGACAGTgcgtatacattttttaaagacaacaaaACACTGTCTGACACAACCCAAAACATACTGAGGATTTCTCCAGTCAGGAAGGACGCTGAAGGGATCTACAGGTGTCAGCATTCACTGGACTCGGAGGAGGTGCAAATATCTGTAAGAGATCTCTTCTCTAGAGTGACTCTGCTAGTCTCCCCTGGAGGCTCAGTGCAGGAGGGAGAGCCTGTGAACCTGACTTGTGATGCCGAGATGTCCGGATACGTCCGTCCCTTGGTCCTCTACTCCTTCAGGAATGGAGAGCTCCTGTCAGAGAGGAGTGGCTCTGCGCTTTACCCCATAGACACTCTGAACCAAACCCTCACAGGGAGCTACAGCTGTGCGGCAGAGACACCCCATGGATTTCAGAAGAACAGCACTGGTGTCACCATCACACTGGCAGAGTCTTGCTGGTTAATGGTCAGGACATTTGGTGGAGGAGCGCTGTGTCTGATCTCCCTCTCTGTCATTTTGATTCTCCACTGCAGAAGAGCTAAGATTACAGGAAAATGTCATCCTGCAAAGAGAGAGTATCCAAGTGAAATCATCGAACTGAAAAATCAAATGTGGTTTCAGTCTCAGCTACTATCTTTCCTTCCTCTCCTTGTCAACACAGGGGCAGACAGGCTGCAGGCATCGCAAGAAGCCGAGGAATTCAGCCCTGACTTCACCCAGACTTGTGCCTGTCTCGGTCATGAAGGAGATTTCCCCAGCACTCAGATTTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012076 True 2319 mRNA 0.52 11 9999738 10004091

Neighbor

gene id symbol gene type direction distance location
AMCG00012075 NA coding upstream 9 9979890 ~ 9999729 (+)
AMCG00012069 LOC106569594,LOC108427136 coding upstream 280541 9712222 ~ 9719197 (+)
AMCG00012057 LOC107713649,LOC107698496,LOC107600231,LOC106569574,LOC105905623,LOC107676327 coding upstream 326377 9659749 ~ 9673361 (+)
AMCG00012067 NA coding upstream 356407 9635496 ~ 9643331 (+)
AMCG00012056 NA coding upstream 454753 9542014 ~ 9544985 (+)
AMCG00012074 NA coding downstream 10753 10014844 ~ 10016191 (+)
AMCG00012079 tmem55b,LOC106569577,LOC107576828,LOC107721780 coding downstream 63465 10067556 ~ 10074742 (+)
AMCG00012078 NA coding downstream 94057 10098148 ~ 10100456 (+)
AMCG00012082 NA coding downstream 261009 10265100 ~ 10280532 (+)
AMCG00012083 NA coding downstream 334737 10338828 ~ 10353743 (+)
G134341 NA non-coding upstream 53249 9927912 ~ 9946489 (+)
G134335 NA non-coding upstream 76721 9847522 ~ 9923017 (+)
G134326 NA non-coding upstream 229053 9769657 ~ 9770685 (+)
G134305 NA non-coding upstream 320636 9676778 ~ 9679102 (+)
G134292 eif3f,LOC105905622 non-coding upstream 345138 9653852 ~ 9654600 (+)
G134369 NA non-coding downstream 190303 10194394 ~ 10244729 (+)
G134339 NA non-coding downstream 195060 10199151 ~ 10200970 (+)
G134378 NA non-coding downstream 265589 10269680 ~ 10270054 (+)
G134495 NA non-coding downstream 590758 10594849 ~ 10595406 (+)
G134498 NA non-coding downstream 594448 10598539 ~ 10598841 (+)
G134340 NA other upstream 63327 9935926 ~ 9936411 (+)
G134338 NA other upstream 132595 9852890 ~ 9867143 (+)
G134295 NA other upstream 343011 9656357 ~ 9656727 (+)
G134291 NA other upstream 346504 9651349 ~ 9653234 (+)
AMCG00012043 NA other upstream 689807 9279988 ~ 9309931 (+)
G134357 NA other downstream 30095 10034186 ~ 10034693 (+)
G134365 NA other downstream 129936 10134027 ~ 10134592 (+)
G134366 NA other downstream 135863 10139954 ~ 10140457 (+)
G134337 NA other downstream 218913 10223004 ~ 10259224 (+)
G134373 NA other downstream 248719 10252810 ~ 10307839 (+)

Expression


Co-expression Network