AMCG00012082


Basic Information

Item Value
gene id AMCG00012082
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 10265100 ~ 10280532 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012082
ATGATCAGTGAAACGAATGAGGGAAAGGGGCATCTGGCTCTCACGCACCTGCCTTTAGCTCCCTCGCCTATGGTCAAGGGCGTTCTGTCTTCCACCATGGAGCACACAGACTCTCCTCTATGCAAAGCCAGCGGCCGCTCCTCCTTACTTAACCGGCAGCTGCGGCTCTTCTGTGGATCAGCAGGTCTCCAGCCAGTCTCTCAGAAACAGGCAACACTGAGCTCTGTGGGAACGATGCTGCCCGTACTTCTGTTTCTGTGGCTGACGGCTGCACCTCGTGAGTTCAAACTAGTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012082 True 297 mRNA 0.56 3 10265100 10280532

Neighbor

gene id symbol gene type direction distance location
AMCG00012078 NA coding upstream 164644 10098148 ~ 10100456 (+)
AMCG00012079 tmem55b,LOC106569577,LOC107576828,LOC107721780 coding upstream 190358 10067556 ~ 10074742 (+)
AMCG00012074 NA coding upstream 248909 10014844 ~ 10016191 (+)
AMCG00012076 NA coding upstream 261009 9999738 ~ 10004091 (+)
AMCG00012075 NA coding upstream 265371 9979890 ~ 9999729 (+)
AMCG00012083 NA coding downstream 58296 10338828 ~ 10353743 (+)
AMCG00012084 NA coding downstream 83424 10363956 ~ 10392598 (+)
AMCG00012087 LOC101065589 coding downstream 262881 10543413 ~ 10545945 (+)
AMCG00012086 LOC107749202,LOC104951120,LOC107733393 coding downstream 271138 10551670 ~ 10564853 (+)
AMCG00012089 NA coding downstream 379370 10659902 ~ 10668786 (+)
G134369 NA non-coding upstream 20371 10194394 ~ 10244729 (+)
G134339 NA non-coding upstream 64130 10199151 ~ 10200970 (+)
G134350 LOC108239224 non-coding upstream 84393 9958351 ~ 10180707 (+)
G134341 NA non-coding upstream 318611 9927912 ~ 9946489 (+)
G134335 NA non-coding upstream 342083 9847522 ~ 9923017 (+)
G134495 NA non-coding downstream 314317 10594849 ~ 10595406 (+)
G134498 NA non-coding downstream 318007 10598539 ~ 10598841 (+)
G134556 NA non-coding downstream 569326 10849858 ~ 10853291 (+)
G134615 NA non-coding downstream 686744 10967276 ~ 10982794 (+)
G134692 NA non-coding downstream 953149 11233681 ~ 11233883 (+)
G134337 NA other upstream 5876 10223004 ~ 10259224 (+)
G134366 NA other upstream 124643 10139954 ~ 10140457 (+)
G134365 NA other upstream 130508 10134027 ~ 10134592 (+)
G134357 NA other upstream 230407 10034186 ~ 10034693 (+)
G134340 NA other upstream 328689 9935926 ~ 9936411 (+)
G134343 NA other downstream 22741 10303273 ~ 10317818 (+)
AMCG00012088 NA other downstream 349152 10629684 ~ 10684097 (+)
G134613 NA other downstream 646074 10926606 ~ 10935107 (+)
AMCG00012112 NA other downstream 768533 11049065 ~ 11061030 (+)
G134697 fus,LOC103040960,LOC107658502 other downstream 961697 11242229 ~ 11293899 (+)

Expression


Co-expression Network