Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00012098 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 10803368 ~ 10804229 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0046872 | metal ion binding | molecular_function |
| id | description |
|---|---|
| K10640 | RNF25, AO7; E3 ubiquitin-protein ligase RNF25 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00012098 | True | 387 | mRNA | 0.57 | 4 | 10803368 | 10804229 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012097 | NA | coding | upstream | 6893 | 10793886 ~ 10796475 (+) |
| AMCG00012096 | NA | coding | upstream | 26286 | 10768044 ~ 10777082 (+) |
| AMCG00012089 | NA | coding | upstream | 134582 | 10659902 ~ 10668786 (+) |
| AMCG00012086 | LOC107749202,LOC104951120,LOC107733393 | coding | upstream | 238515 | 10551670 ~ 10564853 (+) |
| AMCG00012087 | LOC101065589 | coding | upstream | 257423 | 10543413 ~ 10545945 (+) |
| AMCG00012099 | NA | coding | downstream | 8468 | 10812697 ~ 10816328 (+) |
| AMCG00012105 | NA | coding | downstream | 12359 | 10816588 ~ 10819586 (+) |
| AMCG00012110 | NA | coding | downstream | 75715 | 10879944 ~ 10890247 (+) |
| AMCG00012107 | NA | coding | downstream | 100823 | 10905052 ~ 10909045 (+) |
| AMCG00012106 | NA | coding | downstream | 109181 | 10913410 ~ 10917138 (+) |
| G134498 | NA | non-coding | upstream | 204527 | 10598539 ~ 10598841 (+) |
| G134495 | NA | non-coding | upstream | 207962 | 10594849 ~ 10595406 (+) |
| G134378 | NA | non-coding | upstream | 533314 | 10269680 ~ 10270054 (+) |
| G134369 | NA | non-coding | upstream | 558639 | 10194394 ~ 10244729 (+) |
| G134556 | NA | non-coding | downstream | 45629 | 10849858 ~ 10853291 (+) |
| G134615 | NA | non-coding | downstream | 163047 | 10967276 ~ 10982794 (+) |
| G134692 | NA | non-coding | downstream | 429452 | 11233681 ~ 11233883 (+) |
| G134698 | NA | non-coding | downstream | 496105 | 11300334 ~ 11302065 (+) |
| G134749 | NA | non-coding | downstream | 699731 | 11503960 ~ 11504648 (+) |
| AMCG00012088 | NA | other | upstream | 119271 | 10629684 ~ 10684097 (+) |
| G134343 | NA | other | upstream | 485550 | 10303273 ~ 10317818 (+) |
| G134373 | NA | other | upstream | 495529 | 10252810 ~ 10307839 (+) |
| G134337 | NA | other | upstream | 544144 | 10223004 ~ 10259224 (+) |
| G134366 | NA | other | upstream | 662911 | 10139954 ~ 10140457 (+) |
| G134613 | NA | other | downstream | 122377 | 10926606 ~ 10935107 (+) |
| AMCG00012112 | NA | other | downstream | 244836 | 11049065 ~ 11061030 (+) |
| G134697 | fus,LOC103040960,LOC107658502 | other | downstream | 438000 | 11242229 ~ 11293899 (+) |
| G134743 | NA | other | downstream | 632150 | 11436379 ~ 11446163 (+) |
| AMCG00012152 | NA | other | downstream | 814948 | 11619177 ~ 11870630 (+) |
