AMCG00012102


Basic Information

Item Value
gene id AMCG00012102
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 10852609 ~ 10858416 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012102
ATGGTCAGCGCTGCGCCGGCTTTCAACGAGTACAGTAAAGGCTTGgATTGGTTAAGCCGCTATGGGTACCTCCCGCCCCCAGACCCGCGTACTGGGAAACTGCAGACGAAGGAGGGCATCGAGAGGGCACTGAGGGTCATGCAGAGATTCGGCGGCATCAAGGAGACGGGCAAACTGGGTACCTATGTGACAGACTTATTtgtggaCAGTTACCCAAACAGGTCCCAGAGCCCCACTCTCTCTGACCGTCTGGTCGACACATTGATTCACTGGGCTCTGAACATCTGGTCTGAAGTCACGCCCCTGCAGTTCAACCAAGTTTCCAAACCAGGGGGTGTCGGCACGGGAGTGGGGCGGCAGCAGGAGCCTGACATCCGTGTGTCGTTCAACAGCTCATACCACCAGGATGGGTATCCCTTCGACGGGCCAGGCGGCACCTTGGCACATGCCTTCTTCCCTGGGGAGCACCCCATCTCCGGGGACGCCCACTTCGATGACCAAGAGACATGGACCTACGGATCGCCTGaTGGGGAGGGTACAGACCTGTTCACAGTGGCCATCCATGAGTTTGGCCATGCCCTAGGCCTGTCGCACTCCTCCTCTCCTCACTCCATCATGGCTCCATACTACAATGGCAGCGTTGGGGACCCGAGAAAccccaGGCCAGCTCTCCCTGATCGCTGTGTGGGTGGATTTGACGCCATCGCCAACATCCGAGGGGAAGTCTTCTTCTTCAAGGGTCAGTATTTCTGGCGTATCCAGCGCTCTGGCTCCCTGGTGTCTCTGAACCCAGCTCTGATCTCCAACTTCTGGCACGGCCTCCCCGCACGCTTCCCTCACATTGATGCCTACTGGGTGTTTAAGGACACAGCAGCGTTGCCAAATTACCCCAAGCCGGTGTCAGACTGGGGGGTGGATGTTGGAGGTGGGGGAGTGCGAGCCGCCTTTGTCTGGGCCCACAATGGCAAGACCTACCTCTTCCGGGGGGGGCTGTTCTGGCGCCATGATGACCGAGAGGGCAGAATAGACCCTGGCTACCCCAAGGAAGCCACATTGTGGAACGGAGTGCCGCCTGAGCCTGATGACATCATCACCTGGGGAGATGGCGACGCCTACTTCTTCAAGGACAATTACTACTGGGTGCAGAAGAAAGGGGGGCTGAGTGAAGAGGCTGCCATGCCCAGATCCCTGGCCGTCGACTGGATGAAATGTCCCCCGCCTCCTACCACCAGCCAACCCCATGCCGTGCCTGACCCCAAGGGGCGGGGGGGCTGCACCTGTGACCTCAACAACAGCCACAATGGGGAGGTTCTTCCTCTCCTTCGGGGTTCTTACTGGCTGTCACTCCAGGGCGTCTGCTGGCTGCTCTGCCTCACGTTCTGTTGATGGAGAAGTGATCAGGAACTTGCAATGCCTTTTGAGTAGAAGAGGAATTTCAAAATTTGGgaagcaattttttttaaggatttttattttattttttatcaggaCTCCTCCTACAACCTACTTACAACTTATACCCCGCCCCCCACCTCTCCTAGTTTCCAGATACTCAGGGAAAATCATCTAGTTAAAAGAAGCAGACTGACTGCAGACAAAGCCAAGATCTATCTATGAACAACCTTTGGGGGAATGTTAGAAATCAAAGAATATCTCAATAAGACATATTTACCAGATTTCAGGTcaatcctaatttaaattacaacacTTTGTTTGTGTATTCTTTAAACTACtgcaatataatatacattgttgctatagaatacatatataaatatatatatatat

Function

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012102 True 1788 mRNA 0.53 8 10852609 10858416

Neighbor

gene id symbol gene type direction distance location
AMCG00012101 LOC102204993 coding downstream 4134 10837316 ~ 10848475 (-)
AMCG00012103 NA coding downstream 16004 10830517 ~ 10836605 (-)
AMCG00012100 si:dkey-16l2.16,LOC107729502,LOC107658507,LOC108427354,LOC107554119,LOC107730777 coding downstream 25462 10818095 ~ 10827147 (-)
AMCG00012095 slc5a2,LOC107672364 coding downstream 90157 10755045 ~ 10762452 (-)
AMCG00012094 cadm3,LOC106600493,LOC106569583,LOC107749121 coding downstream 147937 10683368 ~ 10704672 (-)
AMCG00012104 NA coding upstream 16671 10875087 ~ 10879326 (-)
AMCG00012109 LOC106570812,LOC108270226 coding upstream 35932 10894348 ~ 10899593 (-)
AMCG00012114 NA coding upstream 128826 10987242 ~ 10988426 (-)
AMCG00012113 NA coding upstream 132201 10990617 ~ 10994160 (-)
AMCG00012116 NA coding upstream 145294 11003710 ~ 11016852 (-)
G134402 NA non-coding downstream 504884 9852901 ~ 10347725 (-)
G134451 NA non-coding downstream 546582 10303569 ~ 10306027 (-)
G134443 NA non-coding downstream 565480 10225627 ~ 10287129 (-)
G134404 NA non-coding downstream 651384 10200802 ~ 10201225 (-)
G134405 NA non-coding downstream 906120 9936100 ~ 9946489 (-)
G134648 NA non-coding upstream 108860 10967276 ~ 10982791 (-)
G134819 NA non-coding upstream 537544 11395960 ~ 11400701 (-)
G134817 NA non-coding upstream 638259 11496675 ~ 11769509 (-)
G134840 NA non-coding upstream 701681 11560097 ~ 11795338 (-)
G134844 NA non-coding upstream 745107 11603523 ~ 11604157 (-)
G134581 NA other downstream 40728 10729775 ~ 10811881 (-)
G134447 NA other downstream 596571 10255526 ~ 10256038 (-)
G134445 NA other downstream 601494 10250271 ~ 10251115 (-)
G134441 NA other downstream 622166 10212142 ~ 10230443 (-)
G134406 NA other downstream 629390 10176920 ~ 10223219 (-)
AMCG00012111 NA other upstream 76516 10934932 ~ 10961871 (-)
G134803 NA other upstream 472050 11330466 ~ 11386979 (-)
AMCG00012171 NA other upstream 1215588 12074004 ~ 12107414 (-)
AMCG00012170 NA other upstream 1251124 12109540 ~ 12122725 (-)
AMCG00012174 NA other upstream 1331599 12190015 ~ 12213799 (-)

Expression


Co-expression Network