AMCG00012103


Basic Information

Item Value
gene id AMCG00012103
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 10830517 ~ 10836605 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012103
TACAGCTCCCGTCGTGCACCGCGAAAGAGTGACGCCACTGCTTGGCGCCGTGCTTCAGACGTGTGTGGAAGGAGCTGAGTACGGCGCGCTGTTCCACTCATACACTATTGCTGTTTTTATAAAGCAACCATTTCCAAAATACATCAAATCTCTTCTAAAAACCGCGAACACCATGGGCCCTGTCGAGctCCTGCACATGTCAGTCTTCTCCCAGAGCTTCTCTCCCTGCGGGCGCTTCCTGGCCGCTGGGAACAACTATGGCGAGATCGCGATCTTCAGTCTGCTCTCCACTGATGGGCAGCTGCTGAGCGCCGGCAATGGAGAAATCACAGCCTGGAACTGGAGCGAGCTGATCAAAAAGGGCATTAAGGCTGTATGGACTCGTAGACCACAGTACAAGACGAGTCTAGAGATGCCAGAGATCAATGCCATGGTCATTAACCCCAGAgataaCTCTCTGTTGGTAGGAGGAGGTGACAACAATATTCACGTGATGGATTTAGAGTCAGGTGTTTTTAAGatGGTGCTGAAAGGTCACAGTGACTACATCCACTGTCTCAGTgtgcgagagagggagggggagacgCTGTCTGGCAGCGAGGACGGGGCTGTCCGAGTCTGGGACTCCAGGACCGGAAGCACGGTGCACTGCATAGAGGACTGTGCCAGGCCCCAGTACGGGAAGTGGATCAGCTGCCTGACGACTGACTCTGATTGGATGAGACAAACCAGCTTCTACCAGGACCTgATCCTGTCGGTAGGGGACAGCGCATTCCTGTCTCACTGTCAGCTCAGTGGAGAGGTGCGTGCGCGGATCCCCTGCTCCCCCCCCAGCCTGTACACTCTGGGGCTCAACACAGGCTCCACTGAACACAGGGTGTTGACAGTAGGGGGCAGCAGCGGACAGATAGACGTCTTCACCAACTTCAGCTACAGAGCCTTCTCACTGTCTTTTTGATACTGTATAAATACGCAACACTCACACTGATACACCGTatacacaacactgacacacacacacagccagcaatCAAACTGATGTACTGTATACAAACACACCCTGTTGttgtatatacacaaacagcCAACActtatacactgtatatatgttttatacatacaACCCACACACACGGATGCTCTgtgtacacacaacacacacacactgatacaccgTATACACAAACCCTTTTGcattgtatacacacacactggtacattgcagtgtgtctgttttttttgtaataaatattttgtaataca

Function

GO: NA

KEGG:

id description
K13175 THOC6; THO complex subunit 6

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012103 True 1263 mRNA 0.51 12 10830517 10836605

Neighbor

gene id symbol gene type direction distance location
AMCG00012100 si:dkey-16l2.16,LOC107729502,LOC107658507,LOC108427354,LOC107554119,LOC107730777 coding downstream 3370 10818095 ~ 10827147 (-)
AMCG00012095 slc5a2,LOC107672364 coding downstream 68065 10755045 ~ 10762452 (-)
AMCG00012094 cadm3,LOC106600493,LOC106569583,LOC107749121 coding downstream 125845 10683368 ~ 10704672 (-)
AMCG00012092 myp0,LOC106600490 coding downstream 180208 10634590 ~ 10650309 (-)
AMCG00012091 NA coding downstream 234146 10592882 ~ 10596371 (-)
AMCG00012101 LOC102204993 coding upstream 711 10837316 ~ 10848475 (-)
AMCG00012102 NA coding upstream 16004 10852609 ~ 10858416 (-)
AMCG00012104 NA coding upstream 38482 10875087 ~ 10879326 (-)
AMCG00012109 LOC106570812,LOC108270226 coding upstream 57743 10894348 ~ 10899593 (-)
AMCG00012114 NA coding upstream 150637 10987242 ~ 10988426 (-)
G134402 NA non-coding downstream 482792 9852901 ~ 10347725 (-)
G134451 NA non-coding downstream 524490 10303569 ~ 10306027 (-)
G134443 NA non-coding downstream 543388 10225627 ~ 10287129 (-)
G134404 NA non-coding downstream 629292 10200802 ~ 10201225 (-)
G134405 NA non-coding downstream 884028 9936100 ~ 9946489 (-)
G134648 NA non-coding upstream 130671 10967276 ~ 10982791 (-)
G134819 NA non-coding upstream 559355 11395960 ~ 11400701 (-)
G134817 NA non-coding upstream 660070 11496675 ~ 11769509 (-)
G134840 NA non-coding upstream 723492 11560097 ~ 11795338 (-)
G134844 NA non-coding upstream 766918 11603523 ~ 11604157 (-)
G134581 NA other downstream 18636 10729775 ~ 10811881 (-)
G134447 NA other downstream 574479 10255526 ~ 10256038 (-)
G134445 NA other downstream 579402 10250271 ~ 10251115 (-)
G134441 NA other downstream 600074 10212142 ~ 10230443 (-)
G134406 NA other downstream 607298 10176920 ~ 10223219 (-)
AMCG00012111 NA other upstream 98327 10934932 ~ 10961871 (-)
G134803 NA other upstream 493861 11330466 ~ 11386979 (-)
AMCG00012171 NA other upstream 1237399 12074004 ~ 12107414 (-)
AMCG00012170 NA other upstream 1272935 12109540 ~ 12122725 (-)
AMCG00012174 NA other upstream 1353410 12190015 ~ 12213799 (-)

Expression


Co-expression Network