AMCG00012106


Basic Information

Item Value
gene id AMCG00012106
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 10913410 ~ 10917138 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012106
GACCTATATAAAGCATGTTGTCTTCGATGGAGTCCAGTAGGGTGAGGAAGAGTCAATCCTCTGTGACCAGTGAGCTGCCGTAGTTGTTGAGAGTCAGTGCTCTGTGTCCAGTGAGAATCCAGGAGGGTCAAGATGCTtttcctgcagctgctgttctCTGTCCTGCTGCTGAACACCTGCGAAGtgtccAGCAGTCCTCTCTTTGGGACTTTCGTAGATGGGCCGAATCTTGATAGTCAGTTCCATTGGAGGTGGCTTGTGGGAGTGGACGTCATCACAGGGGGCAGTGGGACGATCTACCCAGGCATCCTGGTTGGGGCAAAGTGGGTTTTGACAGCCCAACACATCTTCAATGGGGCTAGCATCAGCCGCAGCAGAGTCTGGGGGGGGGACAATGATCTGAGGCAAGGCAATGCGTCGCAAATCAGACACGTCTACAGGCACAGCTATGACTTGGCCCTGGTTGAGCTGGAAACTCCCTTCAACTTGGCTTACATCGCTTTGCCCTATCCCAATTCCATGCCTCCATCTAACGCACGGTGCTTCGTCGCTGCCTGGAAATCTCTCCACAGATTAAACAGGTGGCATCCAGTGAGTGGGGACATTGAAGTCACAAGTTGTGGCAGATATTACCCACATCGATTTGACACATTCTGTGCCAGCAGCGAGAGTGGAACTAGACTCTGCCAGggtgACTCAGGTGGCCCTATGTTCTGCTATGCTGGGCGCAGTTACATCCTGTATGGGGTGGTGTCTGAGGGTCAGCGAGATTGCAACAGTCATGTGTCAGTACCAACCCTGTTCAGTAAAGTCTCCCGAGTGGTTAACTGGATCAGGAGCAAGATGTAATATCTGCCCTGAAGccttggggggtgggggggcagtgtcCCCTGTTTGCCTACCAAgctcactgcactgctctgcttAAACCCCCGAAGAACCCAGAGTGAAGTATATATGAAGCTGTCTTCCACACATTTCAAAggcttgacaaaaaaaaaaaaaattgatctGGGTTGAGTATGCCTCTGCGTGCCATGTATGTATCATTTGGGTTTGTAAGGGATAATCACACctagaaagagagggagaaagagagggaaagagggggaAAGAATATTAGATATTCccttcagtttttaaaatttaCAACAGGATACAAGAAAAAGAGAGTGAGAAAAATATGATAGAAAAGTCTCTAATGCAACAGTGCGGCAGAAAGtgaaccagagagagagacagggaaatgTATGCTTTCTTTTGCACTGTTCTATATTcgtctttctctgtctccctcttctctctgccccctcctcatttcccacctctctctctgtctgtctggtgtGAGTCTGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012106 True 1357 mRNA 0.49 5 10913410 10917138

Neighbor

gene id symbol gene type direction distance location
AMCG00012107 NA coding upstream 4365 10905052 ~ 10909045 (+)
AMCG00012110 NA coding upstream 23163 10879944 ~ 10890247 (+)
AMCG00012105 NA coding upstream 93824 10816588 ~ 10819586 (+)
AMCG00012099 NA coding upstream 97082 10812697 ~ 10816328 (+)
AMCG00012098 NA coding upstream 109181 10803368 ~ 10804229 (+)
AMCG00012108 NA coding downstream 63540 10980678 ~ 10980866 (+)
AMCG00012123 NA coding downstream 269630 11186768 ~ 11195348 (+)
AMCG00012121 NA coding downstream 296470 11213608 ~ 11224284 (+)
AMCG00012122 NA coding downstream 330044 11247182 ~ 11248652 (+)
AMCG00012127 mapk7 coding downstream 385316 11302454 ~ 11312044 (+)
G134556 NA non-coding upstream 60119 10849858 ~ 10853291 (+)
G134498 NA non-coding upstream 314569 10598539 ~ 10598841 (+)
G134495 NA non-coding upstream 318004 10594849 ~ 10595406 (+)
G134378 NA non-coding upstream 643356 10269680 ~ 10270054 (+)
G134339 NA non-coding upstream 712440 10199151 ~ 10200970 (+)
G134615 NA non-coding downstream 50138 10967276 ~ 10982794 (+)
G134692 NA non-coding downstream 316543 11233681 ~ 11233883 (+)
G134698 NA non-coding downstream 383196 11300334 ~ 11302065 (+)
G134749 NA non-coding downstream 586822 11503960 ~ 11504648 (+)
G134766 NA non-coding downstream 794112 11711250 ~ 11766411 (+)
AMCG00012088 NA other upstream 229313 10629684 ~ 10684097 (+)
G134343 NA other upstream 595592 10303273 ~ 10317818 (+)
G134373 NA other upstream 605571 10252810 ~ 10307839 (+)
G134337 NA other upstream 654186 10223004 ~ 10259224 (+)
G134366 NA other upstream 772953 10139954 ~ 10140457 (+)
G134613 NA other downstream 9468 10926606 ~ 10935107 (+)
AMCG00012112 NA other downstream 131927 11049065 ~ 11061030 (+)
G134697 fus,LOC103040960,LOC107658502 other downstream 325091 11242229 ~ 11293899 (+)
G134743 NA other downstream 519241 11436379 ~ 11446163 (+)
AMCG00012152 NA other downstream 702039 11619177 ~ 11870630 (+)

Expression


Co-expression Network