AMCG00012112


Basic Information

Item Value
gene id AMCG00012112
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 11049065 ~ 11061030 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012112
TCACAGGCTCAGGCAAATGTAGACATCTGTGGGCAGCCCATAGGATCATTGGACTGGCCCTGGCAGGCTAGTCTGCACCGCAATGGGACACACGTCTGTGGGGGAACTCTGCTCACCAGTGAGTGGGTGATGACAGATGCACAGTGCTTACCCAGCTCTGTGAATCTCAGCCAGTGGACGGTGGTCCTAGGCATACAGAACCAGAGTGGCTCCAACCCATATAAAGTGTCAGCGGGGGTCCAGCAGGTCATCAGCAGCAACTTCAATGGCAGCAACATCGCCCTCCTGCAACTGAAGCCCAACGTCTCATTCAACGACAACATCCTGCCCATCTGCCTGCCAGACCCGGGCATCTTTTTGGGCTCTAATCCTGACTGTTGGGTTACTGGCTGGGGCAGCCAGTGGGTGGGAATAGGGATGCTCCAGGCACAGCAAGTGACACTCACCCAGTGTTCCAACACCTCCTCTCCTGACGCAATCTGTACCGAACCCCTGGACCTGCAGCAGGGATACCAGGGTGGTCCCCTCGTCTGTTACCTATCCTCAGGTTGGGTTCAGATCAGCGTCATCACAGTTGAAAAAGGGGATCGTGCCCTCGAGCCCATGGGGTTCACCAGCATAACCGAGTACGATAACTTCCTGCAGGGGATTGTGGGCCCCAGCCTGCCCCTCGTTAGAGCCAGTGTAAGCTCTGCTCCCAAGACCATGGAGGCAATCTCGCTCATTCTTTTCTTACTACTGGCAATCTGGATC
>TU168992
ATTcaaaccctctctccttcacaccCCTCTGTTTCATAGATTCATCGCAAagtcttgctttctttctagaatcaattctgagccttgtttcgtgtttgcttctctgtgttttttgacctcttgctatcttctctcgtttaccccttctggatctccccactagcctgttcaCCTGATCGATCGACCTTGGACtgtctctgttttctctctctcgttttgcccttattggattatctgcttcaacttctagcctgcacttggatcccttCCTTTGGTCCTTGTGGACATGACACTATCAGAGTAGAAAGTATCATCTGACAAATTAAGATGCGATAGGATACATGATTGTCCTTTGTCATTAGCAGAATCACAGGCTCAGGCAAATGTCTGTGGACAGGCCCCCCTCAACACCAGGATCGTGGGGGGTGAGTCNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012112 True 753 mRNA 0.56 5 11055439 11061030
TU168992 False 434 lncRNA 0.45 3 11049065 11055684

Neighbor

gene id symbol gene type direction distance location
AMCG00012108 NA coding upstream 68199 10980678 ~ 10980866 (+)
AMCG00012106 NA coding upstream 131927 10913410 ~ 10917138 (+)
AMCG00012107 NA coding upstream 140020 10905052 ~ 10909045 (+)
AMCG00012110 NA coding upstream 158818 10879944 ~ 10890247 (+)
AMCG00012105 NA coding upstream 229479 10816588 ~ 10819586 (+)
AMCG00012123 NA coding downstream 125738 11186768 ~ 11195348 (+)
AMCG00012121 NA coding downstream 152578 11213608 ~ 11224284 (+)
AMCG00012122 NA coding downstream 186152 11247182 ~ 11248652 (+)
AMCG00012127 mapk7 coding downstream 241424 11302454 ~ 11312044 (+)
AMCG00012128 NA coding downstream 299209 11360239 ~ 11382588 (+)
G134615 NA non-coding upstream 66271 10967276 ~ 10982794 (+)
G134556 NA non-coding upstream 195774 10849858 ~ 10853291 (+)
G134498 NA non-coding upstream 450224 10598539 ~ 10598841 (+)
G134495 NA non-coding upstream 453659 10594849 ~ 10595406 (+)
G134378 NA non-coding upstream 779011 10269680 ~ 10270054 (+)
G134692 NA non-coding downstream 172651 11233681 ~ 11233883 (+)
G134698 NA non-coding downstream 239304 11300334 ~ 11302065 (+)
G134749 NA non-coding downstream 442930 11503960 ~ 11504648 (+)
G134766 NA non-coding downstream 650220 11711250 ~ 11766411 (+)
G134779 NA non-coding downstream 758227 11819257 ~ 11844832 (+)
G134613 NA other upstream 113958 10926606 ~ 10935107 (+)
AMCG00012088 NA other upstream 364968 10629684 ~ 10684097 (+)
G134343 NA other upstream 731247 10303273 ~ 10317818 (+)
G134373 NA other upstream 741226 10252810 ~ 10307839 (+)
G134337 NA other upstream 789841 10223004 ~ 10259224 (+)
G134697 fus,LOC103040960,LOC107658502 other downstream 181199 11242229 ~ 11293899 (+)
G134743 NA other downstream 375349 11436379 ~ 11446163 (+)
AMCG00012152 NA other downstream 558147 11619177 ~ 11870630 (+)
G134898 NA other downstream 969867 12030897 ~ 12031490 (+)
G134955 NA other downstream 1111508 12172538 ~ 12172802 (+)

Expression


Co-expression Network