AMCG00012130


Basic Information

Item Value
gene id AMCG00012130
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 11312924 ~ 11319748 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012130
CAGATTCAGTTCTCAAGAAGCTCTGGGATTACTGGTTTCCCGTTTTCTTTGTGCGGTATTTTCTGCGTTGTCGGAATTTGTGCTCAAACTACCGAGGGAAACCGAGGAGAAACCAGAGAGGTATCCCACCATGCCCTGGACATTGGAAATGACTCTCACTCTGCTACTGTTCACACTTGGACTGTGGACATGTGAAGCACAAGggtGTGGGCAACCACCCCTAAACAACCGTATCGTGGGGGGTCAGAATGCACCGGAGGGGGCGTGGCCATGGAACGTGGACATCCAGCAGCAAGGCGTGGGGCACGTGTGTGGGGGCTCCCTCATAGATAACAGCTGGGTGCTGTCTGCTGCTCACTGCTTCCCCAGCTCAGTGGACAGCTCGATCTACATCCTGTACTTGGGCCGCTACCAGCTGAATGGCATCAACAGCAACGAGGTGAGCCGGCGTGTGCAGCAAGTGGTGGTTTACCCTGGATACATGGAGCCGCAGCAGGGGTCCGATGTGGCGCTTGTGCAGCTGGATAGCCCAGTCGAATACACCGACTTCATCTTGCCCGTCTGTCTGCCAGACCCCAGCGTGCTCTTCTCCGATACCATGGACTGCTACGTCACAGGCTGGGGACAAACCACACAGGGCGGTGAGGCGGGGGCGGGTGCACAAGGGGAAGGAGGAGACTCGGGCGGCCCCCTGGTGTGCTCCATGGTGAACAACACCTGGGTGCAGGCGGGGGTGGTGAGCTTCGGCGAAGGCTGTGCCATCGCTAACCGTCCAGGTGTCTACGCCAGGGTGACATCCTTCTCCAGCTGGGTACAAAGCTATCTGACCGATATCACGCTGGTGGGCCGTGCGGCCCCCACTGCCTTTGCTCAGCCTGCCATCGTCATCCTCGCCCACGGCCTAGCCTCTGCACTCATCGCCACGCTGCTCAGATAGAGAGAAATTATGGGTGGAGGTATGGTGGGAGGGTGGAAACTAAATtaagggagagagggaatggGGAGATGGAGGGATGGAAAGAAGATGAGAGAATGGTGGGAAGCTAATTCTTCAATTCACCGGACCAATGGAAATCTAACCTGCATCTGAGCTCTGACTACACACAACTGGACTCGTGTACTTTTTGAAGGGCTAAGAGGTGTCCCAAGGCACCGGGTCTTATTTACAGGGTACTTCTAATTTTTACGAATTATCactttaattatgattttgtttttatatatgtccTTGTCACAGTTGAATTTGTAGTCATGTATTggtaaattaaagaaacaaacatgga

Function

GO:

id name namespace
GO:0008233 peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012130 True 1283 mRNA 0.54 6 11312924 11319748

Neighbor

gene id symbol gene type direction distance location
AMCG00012133 NA coding downstream 12103 11298027 ~ 11300821 (-)
AMCG00012131 fus,LOC103040960,LOC107658502,LOC107689689,LOC101075112 coding downstream 15821 11284737 ~ 11297103 (-)
AMCG00012124 NA coding downstream 30116 11274224 ~ 11282808 (-)
AMCG00012126 NA coding downstream 47355 11263489 ~ 11265569 (-)
AMCG00012125 NA coding downstream 88677 11216143 ~ 11224247 (-)
AMCG00012129 kat8,LOC102799453 coding upstream 2459 11322207 ~ 11331281 (-)
AMCG00012132 NA coding upstream 27740 11347488 ~ 11350937 (-)
AMCG00012139 NA coding upstream 62531 11382279 ~ 11388734 (-)
AMCG00012141 NA coding upstream 216278 11536026 ~ 11540090 (-)
AMCG00012149 NA coding upstream 336328 11656076 ~ 11657132 (-)
G134648 NA non-coding downstream 330133 10967276 ~ 10982791 (-)
G134451 NA non-coding downstream 1006897 10303569 ~ 10306027 (-)
G134443 NA non-coding downstream 1025795 10225627 ~ 10287129 (-)
G134404 NA non-coding downstream 1111699 10200802 ~ 10201225 (-)
G134405 NA non-coding downstream 1366435 9936100 ~ 9946489 (-)
G134819 NA non-coding upstream 76212 11395960 ~ 11400701 (-)
G134817 NA non-coding upstream 176927 11496675 ~ 11769509 (-)
G134840 NA non-coding upstream 240349 11560097 ~ 11795338 (-)
G134844 NA non-coding upstream 283775 11603523 ~ 11604157 (-)
G134849 NA non-coding upstream 339973 11659721 ~ 11660305 (-)
AMCG00012111 NA other downstream 351053 10934932 ~ 10961871 (-)
G134581 NA other downstream 501043 10729775 ~ 10811881 (-)
G134447 NA other downstream 1056886 10255526 ~ 10256038 (-)
G134445 NA other downstream 1061809 10250271 ~ 10251115 (-)
G134441 NA other downstream 1082481 10212142 ~ 10230443 (-)
G134803 NA other upstream 10718 11330466 ~ 11386979 (-)
AMCG00012171 NA other upstream 754256 12074004 ~ 12107414 (-)
AMCG00012170 NA other upstream 789792 12109540 ~ 12122725 (-)
AMCG00012174 NA other upstream 870267 12190015 ~ 12213799 (-)
G134981 NA other upstream 901457 12221205 ~ 12223185 (-)

Expression


Co-expression Network