AMCG00012141


Basic Information

Item Value
gene id AMCG00012141
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 11536026 ~ 11540090 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012141
ATGCAGGTCAACCAGCCACAGGTTACAATGAAAGCAGAATTCTCCCAGCAGAATGTCCCCATAGGGGAACAGAAGTGGAATCCAGAAACCAAGAGGGTCAAGATGCTTTTCTTGCAGCTGCTGTTCTGTGTCCTGCTCCTGATCACTCCTGAAGtaTCCAGCAGTCCTCAGTTCAGGAGCTTCATCGTGGGGGGACATGACGCGACAAAAGGAAAGTGGCCCTGGATGGCCTATCTCAAGGTCTTTGTGAAAAAAGCTGATAATTCCGAATGGTTGACTATGTGTGGCGGCTCCCTGATCAGCGCCCAGTGGGTTCTTACTGCAGCGCACTGCTTTGATGGAACTTTTAATCAGCACAAATCCAGGGTGCTCCTGGGGGAGATCAGCTTGACcggaaaacaacacaaaatgatcAAGATACAAAAAGTCATCAAGCATGAGAAGTACCGCCACTATGATGCAGGAAATGACATCGCCTTGGTGCTGCTGAGTGAAAAACAGTCCTTGAATGCAGTGATCAGACCAGTCGATCTGTCCCGGGGAAATGAGGATTTCTCCAACAGGGGGGAGTGCTGGATCACCGGCTGGGGCTTAACGGAAGACAATAAATCTCTCCCAAAATCCAAGATTCTACAGCAAGTCAAGGTTCCTGTTTTTACAGGCGATCAATGCAGGAAATACTGGGACTCTGTGCCAGCTCACACACTCTGTGCTGGGACAGAGAAACAGGGCGCCTGTGTGgGGGATAGTGGAGGTCCTCTGGTCTGTATTGTGAATGACCGTTGGGTCCAGGCTGGTATTGTGAGTTATGGACCTGAAGGCTGCAGGATTCCCTTGAAGCCCACAGTGTTCACTCAGGTCTCCAACTTCCTGCCCTGGATAAAAAATCACACCAACATGCACAATTTCTACTGAGGTGTACAGATTGCACCCCTCTTGACTCCCCAGCTCAATGCACAGCAAATACAGAGAgggacacaaaacacaacatatatGACCAGTTTCTATATGACCAGTCAtgcatatacacaaacatatacatatcaaCATGTAAACAGACTTGATGTTCTGTTCCAttatcccctctctctcactgtctctttTAATGAAAGAAAGTTTCAGATTAGAGAAAATATGGGGTGCCAAATGTAAATCAAAGCACACAAATGTTAAAtctctgttttgaaaaataaatatttgccgTTAGACAACatatttagctaaatcctaaatatgggctttgcaaattaaacatttaactttgaaataaatatttaactttaatcTGAATTATCTGAgtcacaaattacatatttaggttttaaataaatctttagtttcaatataaatgttaaatctaaatctaaatgttaaatataaatgttggcTCTGCTCTGCTATGAGAGATCAGTTGAACTGTGACTGTGGCTTAACAGGCTCAATAAAACCACAGAGCATTCAAA

Function

GO:

id name namespace
GO:0019538 protein metabolic process biological_process
GO:0043603 cellular amide metabolic process biological_process
GO:0043604 amide biosynthetic process biological_process
GO:1901564 organonitrogen compound metabolic process biological_process
GO:1901566 organonitrogen compound biosynthetic process biological_process
GO:0009058 biosynthetic process biological_process
GO:0009059 macromolecule biosynthetic process biological_process
GO:0043043 peptide biosynthetic process biological_process
GO:1901576 organic substance biosynthetic process biological_process
GO:0006412 translation biological_process
GO:0010467 gene expression biological_process
GO:0044237 cellular metabolic process biological_process
GO:0044238 primary metabolic process biological_process
GO:0044249 cellular biosynthetic process biological_process
GO:0044260 cellular macromolecule metabolic process biological_process
GO:0044267 cellular protein metabolic process biological_process
GO:0044271 cellular nitrogen compound biosynthetic process biological_process
GO:0071704 organic substance metabolic process biological_process
GO:0006518 peptide metabolic process biological_process
GO:0043170 macromolecule metabolic process biological_process
GO:0006807 nitrogen compound metabolic process biological_process
GO:0034641 cellular nitrogen compound metabolic process biological_process
GO:0034645 cellular macromolecule biosynthetic process biological_process

KEGG:

id description
ko03010 Ribosome

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012141 True 1463 mRNA 0.43 6 11536026 11540090

Neighbor

gene id symbol gene type direction distance location
AMCG00012139 NA coding downstream 147292 11382279 ~ 11388734 (-)
AMCG00012132 NA coding downstream 185089 11347488 ~ 11350937 (-)
AMCG00012129 kat8,LOC102799453 coding downstream 204745 11322207 ~ 11331281 (-)
AMCG00012130 NA coding downstream 216278 11312924 ~ 11319748 (-)
AMCG00012133 NA coding downstream 235205 11298027 ~ 11300821 (-)
AMCG00012149 NA coding upstream 115986 11656076 ~ 11657132 (-)
AMCG00012154 NA coding upstream 236351 11776441 ~ 11789617 (-)
AMCG00012157 NA coding upstream 267909 11807999 ~ 11813611 (-)
AMCG00012156 NA coding upstream 302978 11843068 ~ 11866778 (-)
AMCG00012158 NA coding upstream 331147 11871237 ~ 11885827 (-)
G134819 NA non-coding downstream 135325 11395960 ~ 11400701 (-)
G134648 NA non-coding downstream 553235 10967276 ~ 10982791 (-)
G134451 NA non-coding downstream 1229999 10303569 ~ 10306027 (-)
G134443 NA non-coding downstream 1248897 10225627 ~ 10287129 (-)
G134404 NA non-coding downstream 1334801 10200802 ~ 10201225 (-)
G134840 NA non-coding upstream 20007 11560097 ~ 11795338 (-)
G134844 NA non-coding upstream 63433 11603523 ~ 11604157 (-)
G134849 NA non-coding upstream 119631 11659721 ~ 11660305 (-)
G134855 NA non-coding upstream 204804 11744894 ~ 11767954 (-)
G134853 NA non-coding upstream 225982 11766072 ~ 11766416 (-)
G134803 NA other downstream 149047 11330466 ~ 11386979 (-)
AMCG00012111 NA other downstream 574155 10934932 ~ 10961871 (-)
G134581 NA other downstream 724145 10729775 ~ 10811881 (-)
G134447 NA other downstream 1279988 10255526 ~ 10256038 (-)
G134445 NA other downstream 1284911 10250271 ~ 10251115 (-)
AMCG00012171 NA other upstream 533914 12074004 ~ 12107414 (-)
AMCG00012170 NA other upstream 569450 12109540 ~ 12122725 (-)
AMCG00012174 NA other upstream 649925 12190015 ~ 12213799 (-)
G134981 NA other upstream 681115 12221205 ~ 12223185 (-)
G135146 NA other upstream 1028161 12568251 ~ 13426065 (-)

Expression


Co-expression Network