AMCG00012144


Basic Information

Item Value
gene id AMCG00012144
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 11619304 ~ 11625687 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012144
ATGcttctcctgcagctgctgttctCTGTGCTGCTCCTGAACACCTACGAAGTGTCCAGCAGTCCTCAGTTCAGGAGCTCCATCGTGGGGGGACATGATGCGACAGAGGGACAGTGGCCCTGGATGGCCTATCTCAAGATCTTTTCTAAAAAAGCAGATCATTCTGAATGGTTCACTGAGTGTGGCGGCTCCCTGATCAGCGCCCAGTGGGTTCTCACTGCAGCGCACTGCTTTGACGGACCTTTCAATCAGGACAAATCCAGGGTGCTCCTGGGGGAGATCAGTGTGACCGACAACCATCACAAAATGATCAAGATACAGAAAaTGGATAGTGGAGGTCCTCTGGTCCATATTGTGAATGACCGCTGGGTCCAGACTGGTATCGTGAGTTACGGGTCTATAAATTGCAAACACCCCTTGAAGCCTGCAGTGTTCACTCAGGTCTCCAGCTTCCTGCCCTGGATAAATAATCACACCAACATGCACGATTTCTACTGA

Function

GO: NA

KEGG:

id description
ko04612 Antigen processing and presentation

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012144 True 498 mRNA 0.51 4 11619304 11625687

Neighbor

gene id symbol gene type direction distance location
AMCG00012145 NA coding upstream 85508 11526885 ~ 11533796 (+)
AMCG00012146 NA coding upstream 109782 11493717 ~ 11509522 (+)
AMCG00012147 NA coding upstream 141182 11477892 ~ 11478122 (+)
AMCG00012142 NA coding upstream 149899 11465808 ~ 11469405 (+)
AMCG00012135 NA coding upstream 173816 11440512 ~ 11445488 (+)
AMCG00012143 NA coding downstream 31702 11657389 ~ 11671798 (+)
AMCG00012148 NA coding downstream 54623 11680310 ~ 11682928 (+)
AMCG00012153 NA coding downstream 65036 11690723 ~ 11700382 (+)
AMCG00012150 NA coding downstream 93653 11719340 ~ 11725106 (+)
AMCG00012151 NA coding downstream 112490 11738177 ~ 11750624 (+)
G134749 NA non-coding upstream 114656 11503960 ~ 11504648 (+)
G134698 NA non-coding upstream 317239 11300334 ~ 11302065 (+)
G134692 NA non-coding upstream 385421 11233681 ~ 11233883 (+)
G134615 NA non-coding upstream 636510 10967276 ~ 10982794 (+)
G134556 NA non-coding upstream 766013 10849858 ~ 10853291 (+)
G134766 NA non-coding downstream 85563 11711250 ~ 11766411 (+)
G134779 NA non-coding downstream 193570 11819257 ~ 11844832 (+)
G134877 NA non-coding downstream 290657 11916344 ~ 11918265 (+)
G134879 NA non-coding downstream 298581 11924268 ~ 11926131 (+)
G134923 NA non-coding downstream 493544 12119231 ~ 12119660 (+)
G134743 NA other upstream 173141 11436379 ~ 11446163 (+)
G134697 fus,LOC103040960,LOC107658502 other upstream 325405 11242229 ~ 11293899 (+)
AMCG00012112 NA other upstream 558274 11049065 ~ 11061030 (+)
G134613 NA other upstream 684197 10926606 ~ 10935107 (+)
AMCG00012088 NA other upstream 935207 10629684 ~ 10684097 (+)
G134898 NA other downstream 405210 12030897 ~ 12031490 (+)
G134955 NA other downstream 546851 12172538 ~ 12172802 (+)
G134958 NA other downstream 555374 12181061 ~ 12181320 (+)
G134968 NA other downstream 565868 12191555 ~ 12192408 (+)
G135026 NA other downstream 940525 12566212 ~ 12716115 (+)

Expression


Co-expression Network