AMCG00012145


Basic Information

Item Value
gene id AMCG00012145
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 11526885 ~ 11533796 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012145
GTGACAGTTTGTGACAGTGAGGTGTATATTTTGCACAGTCTCTGGTGGGGTTTAGTAGAGTGGAGGAGAGTCAGACCACTGTGTCAAGTGAGAATCCAGGAGAGTTAAGATGCTGTTCTTGCAGCTGCTGTTTCTTTTCCTGCTCCTGAACACTTTTGAAGTGTCCAGCAGTCCCTTATCCAGGAGCTCTATTGTGGGGGGTCAAGATGCAAGGAAGAGAGAGTTTCCCTGGCAGGCCTATCTCGAGATCAGTTTGAAGAATAAACCTGGATACATTATCACATGTGGCGGCTCTCTGATCAGTCAGCGCTGGGTCATCTCTGCGGCACACTGCTTTGACAGTTCTCATATCTTGACAGACTCTCTGGTGCGTCTAGGAGCCTATAAGTTGAGTAATCGCACTCGTGGTGAACAAAGTCTTCACATGAAGAGGGTCATCGTGCACGAGAAGTATGTTGTTGACAAAATTGAGAAAGGCTATGACATTGCCCTGGTGGAGCTCTCTAAGCCAGTGTCCTACACCACTTACATAAAGCCTGTCACTCTGGCAAATGCTGATGGTGACTTCACCTTGGGATGGGAGTGCTGGGCGACAGGCTGGGGGAGAATTCGAGAGAACGTACCCCTTCCAGAGCCTCAGACTCTACAGAAAGTCAAGCTGCCCATTATAGGAAACAGAAGTTGTCAGCGTTTGTTCAGGAATTTCTacaacatcaaaccagagaTGATGTGTGCCGGGTACAAGGAGGGAAAGAAGGATACCTGCCAGGGTGACTCTGGGGGGCCTCTGGTCTGTAGTAAGATAAGTAGGAAGAGATGGGTTCTAGCTGGCATCACCAGCTTTGGGAGGGGCTGTGCCCGACCCAATAACCCTGGTATCTACACCCGGGTCTCCAGCTTCCGAAAATGGATAAAGCAGCACAGTGGTGTCTGAGGCTCCCACTGAGGACAGCGCCCCCAACCTGGCTGACTGGCTCACTGCAAGCTCTGCTGCACCCAGATCTGATATCTGCTAAGACCAGCAGTTTATATCACATGCACTGTTTCCACTGTACCCTGCTcttttcctgtgtctctctgtcctgtTGTTGCATATTTCTTACAGAGGGACTCTCTGtaattttctttgtctttcacaccctctctctcaccctgttTCTCTTTCACTGTGTCTCCAGATCCGGTTCATTCCTGAgggaattgtgtgtgtgtgttggaaaggtcATTTGAATGTGTgacgccccccacccccccatcccccggtgtctggaccttgactataccttgaccaagaaatttggaccctgacacaaaataattgactacccctgctttAGACAGACATATCCCCTAGCTCTTATGTGTCCGTCAATAGTAGCATATAgggaaaccaaacaaacaaacaaacaaaaacatgaaaacaaatataaaaacaaacaaacatctacGATCATCTgtcccaataataataatacgtaaGGAACAACAcatcaaaatgcaaaacactcAAAAAATCAATTGGCACACCAATCCTCCGGATGTACAATTAGAGAACACAGTCATCAGTAGTTTTCGattaatgcagaaaaatagCAAATGATATTAATAGTGCCCTATACTAATATTtagatgtatacattattattaaaatacaaattattatgttAAAGTGTGCTTTTAAactatgtatacatatttgtaaatgaccttaatataaagtgttaacTAACATTTTCATGTGCAGATGTACAGGATAAACAATAACTTTTATAACATCCTCTAGGAATGTTTGTAACACATCTATTCATAGGTAATACACTAGGGCTACTTCATCTATCTATCAGGGGCTAATGGAGGGATTTTAATGGACAAGTTGTAAATCAGTGTTGCATAGCTAGTAGAGCTTCTTAACTGATGTAGTTTAAAGCTCTATAGGTGTTTTACATAAgtgcaatgtaaacaaagcacaacaaatttaaactaaatatactGAGCTGACTTACAGAAGACCCCACAGTCCGAATCTGGGGTGCCCCTGGCTGTTTCTGATTAATAATGGTTCTGCAAATCTCTTTAAATTAAACCGATCAGTTCATGGTAGTTCTTGGTAAAATGATGCCCTCTAGTCATATGTAAAACCACTTGTACTTTATAATCTTTGACAACTGAAGAGCAAGCCCTGACAAATtatcaatcacattttaatgtttacttattACTGATTACTttaatggtaacactttacaataagtaccCCTTATTAAGTAATTAGTTAACCCCATTAACTAATATGTTAGTTAACATGAAGAAaccagtaactaatgcatcaacaagtcATGAAAAGTAATTCCAGTAAATAACTAAGTAATGTGTTAACGGGTTCTTGTCACAAGCTGTCTGaagtctgattggttacttgcctttaggaggtGAGACAAATACAATGCGACTGATTGGGTGATGTATTCAGAAGTCCAGCTCTCTGGCTGTTACTGTGCTTAATCCTACCTTCAAGGAGTAAATTATCCAATCAGGAAGGAAGTAGTTCTGGAGTTTTAGAACATTATGCAAACAGACGATCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012145 True 2582 mRNA 0.42 5 11526885 11533796

Neighbor

gene id symbol gene type direction distance location
AMCG00012146 NA coding upstream 17363 11493717 ~ 11509522 (+)
AMCG00012147 NA coding upstream 48763 11477892 ~ 11478122 (+)
AMCG00012142 NA coding upstream 57480 11465808 ~ 11469405 (+)
AMCG00012135 NA coding upstream 81397 11440512 ~ 11445488 (+)
AMCG00012137 NA coding upstream 86375 11436517 ~ 11440510 (+)
AMCG00012144 NA coding downstream 85508 11619304 ~ 11625687 (+)
AMCG00012143 NA coding downstream 123593 11657389 ~ 11671798 (+)
AMCG00012148 NA coding downstream 146514 11680310 ~ 11682928 (+)
AMCG00012153 NA coding downstream 156927 11690723 ~ 11700382 (+)
AMCG00012150 NA coding downstream 185544 11719340 ~ 11725106 (+)
G134749 NA non-coding upstream 22237 11503960 ~ 11504648 (+)
G134698 NA non-coding upstream 224820 11300334 ~ 11302065 (+)
G134692 NA non-coding upstream 293002 11233681 ~ 11233883 (+)
G134615 NA non-coding upstream 544091 10967276 ~ 10982794 (+)
G134556 NA non-coding upstream 673594 10849858 ~ 10853291 (+)
G134766 NA non-coding downstream 177454 11711250 ~ 11766411 (+)
G134779 NA non-coding downstream 285461 11819257 ~ 11844832 (+)
G134877 NA non-coding downstream 382548 11916344 ~ 11918265 (+)
G134879 NA non-coding downstream 390472 11924268 ~ 11926131 (+)
G134923 NA non-coding downstream 585435 12119231 ~ 12119660 (+)
G134743 NA other upstream 80722 11436379 ~ 11446163 (+)
G134697 fus,LOC103040960,LOC107658502 other upstream 232986 11242229 ~ 11293899 (+)
AMCG00012112 NA other upstream 465855 11049065 ~ 11061030 (+)
G134613 NA other upstream 591778 10926606 ~ 10935107 (+)
AMCG00012088 NA other upstream 842788 10629684 ~ 10684097 (+)
AMCG00012152 NA other downstream 85381 11619177 ~ 11870630 (+)
G134898 NA other downstream 497101 12030897 ~ 12031490 (+)
G134955 NA other downstream 638742 12172538 ~ 12172802 (+)
G134958 NA other downstream 647265 12181061 ~ 12181320 (+)
G134968 NA other downstream 657759 12191555 ~ 12192408 (+)

Expression


Co-expression Network