AMCG00012146



Basic Information


Item Value
gene id AMCG00012146
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 11493717 ~ 11509522 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00012146
TCCAGCAGTCCCTTGTCCAGGACCTCTATAGTGGGGGGTCATAATGCAAGGAAGGGAGAGTTTCCTTGGCAGGCCTATCTCAAGATCAGTTTGAAGAATAGACCTGGATACATTATCACATGTGGTGGGTCACTGATCAGTCAGCGCTGGGTTCTCTCTGCGGCGCACTGCTTTGACAGCACTCTTGGTGAACAAACACTTCACATGAAGAGGCTCATCGTGCACCAGAAGTATGTTGTTGGCAAAGTTGAGAAGGGCTATGACATCGCCCTGGTGGAGCTCAGTCGGAGAGTGTCCTTCACCCGGTACATCAGATCTGTCTCTCTGGCTCAGGCTCATGCTGCTGACTTCAGGGGCTGGCAGTGCTGGGCGACAGGTTGGGGGAGAATCAAAGAGAACGTACCCCTTCCAGAGCCTCAGACTCTACAGAAAGTCAAGCTGCCCATTATAGGAAACAGAAGTTGTCAGCGTTTGTTCAGGAATATCTacaacatcaaaccagagaTGATGTGTGCCGGGTAcaagaagggaaagaaagatACCTGTCAGggTGACTCTGGGGGGCCTCTGGTCTGTaggaagagaaggaggagaCGATGGGTCCTGGCTGGAATCACCAGCTTTGGGAGGGGCTGTGCTCAACCCCGATCCCCTGGTATCTACACCCGGGTCTCCAGCTTCCGCCACTGGATAAAGCAGCACAGTGtaTCCAGCAGTCCTCTGACCAGGAGCTCTATAGTGGGGGGTCAAGATGCAGAAGAGGGACAGTGGCCCTGGCAGGTCTATCTCCTGGTTGGCTGTGGCGGCTCCCTGATCAGTGATCGCTGGGTTCTCACTGCAGCACACTGCATTCAAGAGTGGTGGGAATCTCCGGTGATCCTGGGACGATACCAGCTTTCAGAACGCAGCAGAAATGAACAAATACGTACCATGAAAAGGATCATCATGCATGAGGAATATCTGAAGACTGGAAGACCTGAGAGTGGCTTTGACATCGCCCTGGTGGAGCTGAATGAGACAGTCAAGAGCAAACTCATCAAGCCTGTTCCTCTGGCCAGCACCAGAGACGACTTCACCAAGGACTGGGAGTGCTGGGCTACAGGCTGGGGAAGGATTGAAAACAACAAGACACTGCCTATGCCCAACACCCTACAGGAGGTCAAACTCCCCATCCTGAAAAACACACGCTGTCAGGAGCTGTACGACGGACGCTTTATTATCAGAAAAGATATGCTTTGTGCTGGGGATGAGATAGGATTGAGAGATACTTGTCAGGGTGACTCTGGAGGTCCTTTGgtttgtaaaaagaaagaaaaggcaggaaAGGAAGAAAAGTGGGTCCAGGCTGGGATTGTGAGCTTTGGCTGGGGCTGTGCATTACGCCAGTCCCCTGGAGTCTACACCCGCGTGTCCAGCTTCATTCCCTGgataaagaaacacacaggaATCAAACACCTG

Function


GO: NA

KEGG:

id description
ko04672 Intestinal immune network for IgA production

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00012146 True 1458 mRNA 0.52 8 11493717 11509522

Neighbor


gene id symbol gene type direction distance location
AMCG00012147 NA coding upstream 15595 11477892 ~ 11478122 (+)
AMCG00012142 NA coding upstream 24312 11465808 ~ 11469405 (+)
AMCG00012135 NA coding upstream 48229 11440512 ~ 11445488 (+)
AMCG00012137 NA coding upstream 53207 11436517 ~ 11440510 (+)
AMCG00012134 NA coding upstream 74935 11409444 ~ 11418782 (+)
AMCG00012145 NA coding downstream 17363 11526885 ~ 11533796 (+)
AMCG00012144 NA coding downstream 109782 11619304 ~ 11625687 (+)
AMCG00012143 NA coding downstream 147867 11657389 ~ 11671798 (+)
AMCG00012148 NA coding downstream 170788 11680310 ~ 11682928 (+)
AMCG00012153 NA coding downstream 181201 11690723 ~ 11700382 (+)
G134698 NA non-coding upstream 191652 11300334 ~ 11302065 (+)
G134692 NA non-coding upstream 259834 11233681 ~ 11233883 (+)
G134615 NA non-coding upstream 510923 10967276 ~ 10982794 (+)
G134556 NA non-coding upstream 640426 10849858 ~ 10853291 (+)
G134498 NA non-coding upstream 894876 10598539 ~ 10598841 (+)
G134766 NA non-coding downstream 201728 11711250 ~ 11766411 (+)
G134779 NA non-coding downstream 309735 11819257 ~ 11844832 (+)
G134877 NA non-coding downstream 406822 11916344 ~ 11918265 (+)
G134879 NA non-coding downstream 414746 11924268 ~ 11926131 (+)
G134923 NA non-coding downstream 609709 12119231 ~ 12119660 (+)
G134743 NA other upstream 47554 11436379 ~ 11446163 (+)
G134697 fus,LOC103040960,LOC107658502 other upstream 199818 11242229 ~ 11293899 (+)
AMCG00012112 NA other upstream 432687 11049065 ~ 11061030 (+)
G134613 NA other upstream 558610 10926606 ~ 10935107 (+)
AMCG00012088 NA other upstream 809620 10629684 ~ 10684097 (+)
AMCG00012152 NA other downstream 109655 11619177 ~ 11870630 (+)
G134898 NA other downstream 521375 12030897 ~ 12031490 (+)
G134955 NA other downstream 663016 12172538 ~ 12172802 (+)
G134958 NA other downstream 671539 12181061 ~ 12181320 (+)
G134968 NA other downstream 682033 12191555 ~ 12192408 (+)

Expression



Co-expression Network