AMCG00012155


Basic Information

Item Value
gene id AMCG00012155
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 11798577 ~ 11803125 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012155
ATGGCATCCGTCGTCAGCGTCCTATCCGAAGACCAGTTCCAGTGCTCCATTTGCCTGGATGTGTTCACAGACCCCGTCTCCACCCCCTGTGGGCACAACTTCTGCCAGGTCTGCATCAGCAAGTACTGGGCAGCCTGCACCCAGTTCCAGTGCCCCCTGTGTAAGCAGAGCTTCGAGAGGAGGCCCAACCTGCACATCAACACCATCCTGAAGGAGATCACAGAGCGCTTCAAGGGCCTGCTGCCCAGTCCTCCCGCGGTCAGCTGGGCCGGGGACACGGTGCCAGAGGTGCCCTGTGACCTCTGCCCGGGTGAGGCCTCCAAGGCGGTGAAGTCCTGCCTGGTGTGCCTGGCATCCTACTGCAGCCCTCACCTCCAGCCCCACCAGCAGAGGGCGGACCTGCGGAGGCACACACTGTCCCAGCCCGTGAGGAACATCCTGCGACGCAAGTGTGCCAAGCACCACAGACTCCTGGACCTGTACTGCAGGACTGACCGCACCTGCGTGTGCGCCATGTGCAGTGAGACCGACCACCGCAAACACAACACTGTCCCCCTGGAGCGAGAGTGGCTCTTAAAgaagGCTAATCTGGGGAAGACGATAGCAGACATGCAGCAAATGATCCAGGAGAAACAGGCGAAGGCAGAGGAGATCAGTCGGTCGGTGGAGCTCAGCAGACTCTCGGCTCAGACTGCCCTCAACGACAGCCTGCAGCTCTTCTCCTCAATGAACTTCCCCTCCCAGTTCCTCACTCCCCAAGGCAAGGACTGGTCTGATGTCACTGTGCACTCTGACCTCTGCCTGGGGGCTGTCCAGCGGGTTGTGTCTGAGCTGGAGGAGAGGGTCCACACCGAAGTGACCAAACTCGCCAAGGCTGATCTGAAGAAGGTTCAGCGCTACGAAGGAATGATGCCCGTTTGCTTATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012155 True 927 mRNA 0.60 6 11798577 11803125

Neighbor

gene id symbol gene type direction distance location
AMCG00012151 NA coding upstream 47953 11738177 ~ 11750624 (+)
AMCG00012150 NA coding upstream 73471 11719340 ~ 11725106 (+)
AMCG00012153 NA coding upstream 98195 11690723 ~ 11700382 (+)
AMCG00012148 NA coding upstream 115649 11680310 ~ 11682928 (+)
AMCG00012143 NA coding upstream 126779 11657389 ~ 11671798 (+)
AMCG00012159 fbxl19,kdm2b,LOC107694447 coding downstream 98422 11901547 ~ 11913954 (+)
AMCG00012162 NA coding downstream 188390 11991515 ~ 12028909 (+)
AMCG00012161 NA coding downstream 230222 12033347 ~ 12036522 (+)
AMCG00012167 stx1b,LOC108228377,LOC107397241,LOC102220115,LOC107666328,LOC103393442 coding downstream 282233 12085358 ~ 12095939 (+)
AMCG00012168 NA coding downstream 329122 12132247 ~ 12141475 (+)
G134766 NA non-coding upstream 32166 11711250 ~ 11766411 (+)
G134749 NA non-coding upstream 293929 11503960 ~ 11504648 (+)
G134698 NA non-coding upstream 496512 11300334 ~ 11302065 (+)
G134692 NA non-coding upstream 564694 11233681 ~ 11233883 (+)
G134615 NA non-coding upstream 815783 10967276 ~ 10982794 (+)
G134779 NA non-coding downstream 16132 11819257 ~ 11844832 (+)
G134877 NA non-coding downstream 113219 11916344 ~ 11918265 (+)
G134879 NA non-coding downstream 121143 11924268 ~ 11926131 (+)
G134923 NA non-coding downstream 316106 12119231 ~ 12119660 (+)
G134942 NA non-coding downstream 344942 12148067 ~ 12158458 (+)
G134743 NA other upstream 352414 11436379 ~ 11446163 (+)
G134697 fus,LOC103040960,LOC107658502 other upstream 504678 11242229 ~ 11293899 (+)
AMCG00012112 NA other upstream 737547 11049065 ~ 11061030 (+)
G134613 NA other upstream 863470 10926606 ~ 10935107 (+)
AMCG00012088 NA other upstream 1114480 10629684 ~ 10684097 (+)
G134898 NA other downstream 227772 12030897 ~ 12031490 (+)
G134955 NA other downstream 369413 12172538 ~ 12172802 (+)
G134958 NA other downstream 377936 12181061 ~ 12181320 (+)
G134968 NA other downstream 388430 12191555 ~ 12192408 (+)
G135026 NA other downstream 763087 12566212 ~ 12716115 (+)

Expression


Co-expression Network