AMCG00012161


Basic Information

Item Value
gene id AMCG00012161
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 12033347 ~ 12036522 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012161
GTTGTCAGTTCGTGGGGTCCATTGCAAGAGTGAAGACACGGAAACAACCGCCTGTCCCCCCCAGGACCACAAACACGGCCAGCCCTGAAACGCACAGGAGCCGCGATGACAGCCACAGCCCTCGACCTATCGCAGCTGCTCCCGCCCACCAAGCTCTCCCAGCTGGCCCGTGATTGGCTGGCGGAGGACACGCCTTCGTTCGACCCGGCGGGGCTGTGCGTGGGGTCGCGGGAGGTCACGGCGGCGCTGCTGTGTAAGACCCCGGGGGGCGTGCTGGCCGGGACCCCCTTCTTCAACGCCGTCTTCTCCGAGCTGGGCTGCAGCGTGGAGTGGCTGTACCCCGAGGGAACCAAGTTTGgcctgGAGCTGGTGACCAGGGTGGCGCTGGTCCGAGGCCCGGCCCGCAGGGTGCTGCTGGGGGAGCGCTGTGCCCTGAATGCCCTGGCCCGGGCCTCAGGCATCGCCAGCCGCTGCCACCTGCTGCTGGAGCGCGCCCGCCACTGTGGCTGGGCCGGGAAGCTGGCCGGCACGCGCAAGACCACCCCCGGCTTCCGACTGGTGGAGAAGTACGCCATGCTGGTGGGGGGCGTGGACACTCACCGGCACGACTTGAGCGGCCTGGTCATGCTGAAGGACAACCACGTCTGGGCCTGTGGGAGCATCACTCAGgcagtgCAGGAGGCGCGCTCTGTGGCTGGGTTCTCCAACAAAGTGGAGGTGGAGTGCAGCAGCGAGCAGGAGGGCAGGGAGGCAGCCCGGGCCGGCGCCGACATCGTTATGCTGGACAACTTCCCCCCGCAGGCTCTGCACTCCGCCGCCCGCTCTCTGAAGCAGCAGTTCCCAGCCCTGCTGATCGAGGCGAGCGGGGGGGTGACCCCGGAGTCGCTGCCCCAGTTCTTCTCCCCCCACGTAGACGTCATCTCGCTGGGCTGCATCACACAGGGCTGCCCTGTGGTGGACTTCTCCCTCAAGGTCCAGCGCCACCCCGGCAGCGAGCCCAGTCCCCCCGCCGACAGGTCCTCCCCGGCCACCCCCGTCAGCAGCGACCAGGGCAACAGCCCCGTCAACGACATCGTCACCACGCTGGGCTCCCCCGTGTCCCGCAGAGACTTTGCATTTTAGGGATCACGGGGAAAGGGGGGACAACACTGTCTCCCAGCTAaatgtccctctctctctctctatccaggACTGGGGCTGGGCTAGACAAAAAACTGCAGTGTGCCAATCTCATCCATACTTTACTAGCAAGAGTAATGCgtcatcccccctccccccagaaCAGAAACAATTGTATCACCCATCTCTTTTCAACACAAACACCAGCTAATTAACCTCTGTGGAGGGGGGAATGGAGTGGGTCAGGGTCATAGGTCAACCCCTAAATCCCTTCACAGCTGGGGGAGACATGCTGATTGATCAGCTGATGACCGCACACCCGTTCTATCTAGAAGCTCCAGCTGTCTGGAACACAGTTAATACACAGTGGGAGCTGCAGATTTATCCAATTGTGTCTTCTGTACCATACGTtatatattcagtttttgtttgtcatACCGATTTCTGGGGAGGGGAAAGAGTCCACagtccacccccacccccactccttGTTGTGCCGAATTCAGTATTGTGTCAGAGTGGGATATTTACCAGCTAGCATGACTCAATGATCAAAACAATCTAATAAATCAATAGTTTACCCAACAATATTGATTGGACTACCTGAACTGCCCAACGACCGTTTCAAATGAGGGCCAATAATATCCAGTACAACTATATTCACACTCcccccactcctctctctctctctctccatcacccACCCCCAGCGCACAGTTCAGCTCAGCCCGCCACCCCAACACTGCCTGTCTGACTGCAACCACAGATAGTCCACAGGgacagggggggggggag

Function

GO: NA

KEGG:

id description
K00767 nadC, QPRT; nicotinate-nucleotide pyrophosphorylase (carboxylating)

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012161 True 1914 mRNA 0.61 5 12033347 12036522

Neighbor

gene id symbol gene type direction distance location
AMCG00012162 NA coding upstream 4438 11991515 ~ 12028909 (+)
AMCG00012159 fbxl19,kdm2b,LOC107694447 coding upstream 119393 11901547 ~ 11913954 (+)
AMCG00012155 NA coding upstream 230222 11798577 ~ 11803125 (+)
AMCG00012151 NA coding upstream 282723 11738177 ~ 11750624 (+)
AMCG00012150 NA coding upstream 308241 11719340 ~ 11725106 (+)
AMCG00012167 stx1b,LOC108228377,LOC107397241,LOC102220115,LOC107666328,LOC103393442 coding downstream 48836 12085358 ~ 12095939 (+)
AMCG00012168 NA coding downstream 95725 12132247 ~ 12141475 (+)
AMCG00012172 phkg2,LOC106907820,LOC103155081,LOC107089513,LOC101485765 coding downstream 181184 12217706 ~ 12223005 (+)
AMCG00012177 LOC107677883,LOC107563784,LOC107743762,LOC108273672 coding downstream 189792 12226314 ~ 12238811 (+)
AMCG00012178 NA coding downstream 209293 12245815 ~ 12247965 (+)
G134879 NA non-coding upstream 107216 11924268 ~ 11926131 (+)
G134877 NA non-coding upstream 115082 11916344 ~ 11918265 (+)
G134779 NA non-coding upstream 188515 11819257 ~ 11844832 (+)
G134766 NA non-coding upstream 266936 11711250 ~ 11766411 (+)
G134749 NA non-coding upstream 528699 11503960 ~ 11504648 (+)
G134923 NA non-coding downstream 82709 12119231 ~ 12119660 (+)
G134942 NA non-coding downstream 111545 12148067 ~ 12158458 (+)
G134944 NA non-coding downstream 122696 12159218 ~ 12159429 (+)
G134945 NA non-coding downstream 124073 12160595 ~ 12161253 (+)
G134946 NA non-coding downstream 124936 12161458 ~ 12162298 (+)
G134898 NA other upstream 1857 12030897 ~ 12031490 (+)
AMCG00012152 NA other upstream 162717 11619177 ~ 11870630 (+)
G134743 NA other upstream 587184 11436379 ~ 11446163 (+)
G134697 fus,LOC103040960,LOC107658502 other upstream 739448 11242229 ~ 11293899 (+)
AMCG00012112 NA other upstream 972317 11049065 ~ 11061030 (+)
G134955 NA other downstream 136016 12172538 ~ 12172802 (+)
G134958 NA other downstream 144539 12181061 ~ 12181320 (+)
G134968 NA other downstream 155033 12191555 ~ 12192408 (+)
G135026 NA other downstream 529690 12566212 ~ 12716115 (+)
G135025 NA other downstream 577451 12613973 ~ 12648812 (+)

Expression


Co-expression Network